Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0004253 Lotus japonicus HOM05D007433 ORTHO05D009199 9.3e-57 223.4 120 100.0
VMungo1309G0469 Vigna mungo HOM05D007433 ORTHO05D009199 2.0e-35 152.5 118 75.4
Phvul.009G073600 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 2.5e-33 145.6 118 74.6
Lalb_Chr11g0062981 Lupinus albus HOM05D007433 ORTHO05D009199 1.2e-32 143.3 120 70.0
TPR.G33670 Trifolium pratense HOM05D007433 ORTHO05D009199 4.7e-32 141.4 118 68.6
Glyma.06G048300 Glycine max HOM05D007433 ORTHO05D009199 8.0e-32 140.6 118 73.7
Psat5g037160 Pisum sativum HOM05D007433 ORTHO05D009199 3.9e-31 138.3 119 68.9
Glyma.04G047400 Glycine max HOM05D007433 ORTHO05D009199 8.8e-31 137.1 107 70.1
Lalb_Chr08g0245211 Lupinus albus HOM05D007433 ORTHO05D009199 4.4e-30 134.8 120 68.3
Medtr3g103330 Medicago truncatula HOM05D007433 ORTHO05D009199 4.4e-30 134.8 118 66.9
Dinv44935 Davidia involucrata HOM05D007433 ORTHO05D009199 7.4e-30 134.0 115 65.2
Potri.014G013600 Populus trichocarpa HOM05D007433 ORTHO05D009199 1.3e-29 133.3 117 67.5
QL12p038428 Quercus lobata HOM05D007433 ORTHO05D009199 8.2e-29 130.6 115 61.7
Thecc.08G085300 Theobroma cacao HOM05D007433 ORTHO05D009199 1.1e-28 130.2 117 67.5
Haze_06413 Corylus avellana HOM05D007433 ORTHO05D009199 2.4e-28 129.0 115 66.1
GSVIVG01009308001 Vitis vinifera HOM05D007433 ORTHO05D009199 4.1e-28 128.3 116 64.7
CiPaw.08G051700 Carya illinoinensis HOM05D007433 ORTHO05D009199 1.6e-27 126.3 115 62.6
Cfa013749 Carpinus fangiana HOM05D007433 ORTHO05D009199 3.5e-27 125.2 115 65.2
Actinidia19585 Actinidia chinensis HOM05D002375 ORTHO05D002457 4.5e-27 124.8 111 62.2
COL.COLO4_28471 Corchorus olitorius HOM05D007433 ORTHO05D009199 7.7e-27 124.0 117 64.1
Rhsim07G0217700 Rhododendron simsii HOM05D007433 ORTHO05D009199 1.7e-26 122.9 119 65.5
Manes.05G183000 Manihot esculenta HOM05D007433 ORTHO05D009199 2.2e-26 122.5 118 60.2
Actinidia29630 Actinidia chinensis HOM05D001492 ORTHO05D001400 5.0e-26 121.3 114 62.3
Potri.002G116200 Populus trichocarpa HOM05D007433 ORTHO05D009199 5.0e-26 121.3 119 63.0
CiPaw.07G172700 Carya illinoinensis HOM05D007433 ORTHO05D009199 6.5e-26 120.9 117 61.5
Hma1.2p1_1170F.1_g263410 Hydrangea macrophylla HOM05D007433 ORTHO05D009199 6.5e-26 120.9 117 63.2
Manes.18G048800 Manihot esculenta HOM05D007433 ORTHO05D009199 2.5e-25 119.0 118 60.2
PGSC0003DMG400004914 Solanum tuberosum HOM05D007433 ORTHO05D009199 7.2e-25 117.5 120 56.7
Prupe.1G419900 Prunus persica HOM05D007433 ORTHO05D009199 3.6e-24 115.2 116 59.5
vmacro04593 Vaccinium macrocarpon HOM05D007433 ORTHO05D009199 3.6e-24 115.2 113 60.2
ClCG05G026590 Citrullus lanatus HOM05D007433 ORTHO05D009199 4.7e-24 114.8 116 62.1
Dinv39208 Davidia involucrata HOM05D007433 ORTHO05D009199 8.0e-24 114.0 103 62.1
Sed0005155 Sechium edule HOM05D007433 ORTHO05D009199 1.0e-23 113.6 116 61.2
Atru.chr13.862 Acer truncatum HOM05D007433 ORTHO05D009199 1.8e-23 112.8 117 59.8
CAN.G1239.9 Capsicum annuum HOM05D007433 ORTHO05D009199 1.8e-23 112.8 92 64.1
Sabra02G0091500 Salix brachista HOM05D007433 ORTHO05D009199 1.8e-23 112.8 97 66.0
Sopen04g031210 Solanum pennellii HOM05D007433 ORTHO05D009199 1.8e-23 112.8 119 54.6
MELO3C016834.2 Cucumis melo HOM05D007433 ORTHO05D009199 2.3e-23 112.5 116 60.3
Gohir.A02G080400 Gossypium hirsutum HOM05D007433 ORTHO05D009199 3.0e-23 112.1 114 62.3
Gohir.D02G088300 Gossypium hirsutum HOM05D007433 ORTHO05D009199 3.0e-23 112.1 114 62.3
Gorai.005G098900 Gossypium raimondii HOM05D007433 ORTHO05D009199 3.0e-23 112.1 114 62.3
Solyc04g077570.1 Solanum lycopersicum HOM05D007433 ORTHO05D009199 3.0e-23 112.1 110 56.4
MD15G1066100 Malus domestica HOM05D007433 ORTHO05D009199 6.7e-23 110.9 114 57.0
Ca_15891_v3 Cicer arietinum L. HOM05D007433 ORTHO05D009199 1.5e-22 109.8 118 61.0
ECA247G0789 Erigeron canadensis HOM05D007433 ORTHO05D009199 1.5e-22 109.8 114 52.6
VMungo0647G2383 Vigna mungo HOM05D007433 ORTHO05D009199 2.0e-22 109.4 121 56.2
Nitab4.5_0013161g0010 Nicotiana tabacum HOM05D007433 ORTHO05D009199 9.7e-22 107.1 114 57.0
Aqoxy6G02471 Aquilegia oxysepala HOM05D007433 ORTHO05D009199 1.3e-21 106.7 117 59.8
Glyma.17G233300 Glycine max HOM05D007433 ORTHO05D009199 1.3e-21 106.7 117 56.4
Peaxi162Scf00340g00061 Petunia axillaris HOM05D007433 ORTHO05D009199 1.3e-21 106.7 120 56.7
TAR376G0199 Trochodendron aralioides HOM05D007433 ORTHO05D009199 1.3e-21 106.7 116 56.0
TAR628G1336 Trochodendron aralioides HOM05D007433 ORTHO05D009199 1.7e-21 106.3 116 56.0
CANSAT25G0221 Cannabis sativa HOM05D007433 ORTHO05D009199 4.8e-21 104.8 118 57.6
Phvul.001G029300 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 4.8e-21 104.8 117 54.7
Eucgr.F00094 Eucalyptus grandis HOM05D007433 ORTHO05D009199 8.3e-21 104.0 102 56.9
FvH4_2g32740 Fragaria vesca HOM05D007433 ORTHO05D009199 1.4e-20 103.2 121 57.9
FAN15G2820 Fragaria x ananassa HOM05D007433 ORTHO05D009199 1.4e-20 103.2 121 57.0
FAN24G3110 Fragaria x ananassa HOM05D007433 ORTHO05D009199 1.4e-20 103.2 121 57.9
Lsat_1_v5_gn_1_480 Lactuca sativa HOM05D007433 ORTHO05D009199 1.8e-20 102.8 117 53.0
FAN20G2053 Fragaria x ananassa HOM05D007433 ORTHO05D009199 2.4e-20 102.4 122 56.6
Nn5g30654 Nelumbo nucifera HOM05D007433 ORTHO05D009199 4.1e-20 101.7 111 55.0
Gohir.A05G211600 Gossypium hirsutum HOM05D007433 ORTHO05D009199 5.3e-20 101.3 105 59.0
Cc10_g07560 Coffea canephora HOM05D007433 ORTHO05D009199 7.0e-20 100.9 119 55.5
FAN27G2289 Fragaria x ananassa HOM05D007433 ORTHO05D009199 7.0e-20 100.9 121 55.4
Gorai.009G221600 Gossypium raimondii HOM05D007433 ORTHO05D009199 9.1e-20 100.5 105 59.0
RcHm_v2.0_Chr6g0309931 Rosa chinensis HOM05D007433 ORTHO05D009199 1.2e-19 100.1 120 60.0
Gohir.D06G022200 Gossypium hirsutum HOM05D007433 ORTHO05D009199 1.6e-19 99.8 117 53.0
Gohir.D05G214900 Gossypium hirsutum HOM05D007433 ORTHO05D009199 2.0e-19 99.4 105 58.1
Gohir.A06G025100 Gossypium hirsutum HOM05D007433 ORTHO05D009199 3.5e-19 98.6 117 52.1
Gorai.010G026800 Gossypium raimondii HOM05D007433 ORTHO05D009199 3.5e-19 98.6 118 51.7
AUR62035005 Chenopodium quinoa HOM05D007433 ORTHO05D009199 7.7e-19 97.4 89 56.2
HanXRQChr10g0295351 Helianthus annuus HOM05D007433 ORTHO05D009199 1.0e-18 97.1 116 55.2
Nn6g34518 Nelumbo nucifera HOM05D007433 ORTHO05D009199 5.0e-18 94.7 128 48.4
Cpa.g.sc142.56 Carica papaya HOM05D007433 ORTHO05D009199 6.5e-18 94.4 118 52.5
Phvul.011G135200 Phaseolus vulgaris HOM05D007433 ORTHO05D009199 4.2e-17 91.7 94 55.3
Sc02g0008080 Simmondsia chinensis HOM05D007433 ORTHO05D009199 7.2e-17 90.9 100 56.0
MBI16_g32085_MAGBIO Magnolia biondii HOM05D007433 ORTHO05D009199 2.1e-16 89.4 114 50.0
Migut.C00395 Erythranthe guttata HOM05D007433 ORTHO05D009199 3.6e-16 88.6 81 56.8
TAR381G0154 Trochodendron aralioides HOM05D007433 ORTHO05D009199 3.6e-16 88.6 118 51.7
EL10Ac1g02355 Beta vulgaris HOM05D007433 ORTHO05D009199 8.0e-16 87.4 120 51.7
CsaV3_4G035230 Cucumis sativus L. HOM05D007433 ORTHO05D009199 1.0e-15 87.0 77 57.1
Oeu014281.1 Olea europaea HOM05D007433 ORTHO05D009199 6.8e-15 84.3 99 55.6
Ciclev10002882m.g Citrus clementina HOM05D007433 ORTHO05D009199 1.5e-14 83.2 120 48.3
Atru.chr13.863 Acer truncatum HOM05D007433 ORTHO05D009199 2.2e-13 79.3 96 51.0
SalBow7G1382 Salvia bowleyana HOM05D007433 ORTHO05D009199 2.8e-13 79.0 80 56.2
DCAR_008860 Daucus carota HOM05D007433 ORTHO05D009199 1.7e-10 69.7 79 51.9
SalBow3G4039 Salvia bowleyana HOM05D007433 ORTHO05D009199 2.3e-07 59.3 48 60.4
Oeu010701.1 Olea europaea HOM05D003086 ORTHO05D003347 3.0e-07 58.9 52 55.8
Migut.B01892 Erythranthe guttata HOM05D003086 ORTHO05D003347 5.2e-07 58.2 48 60.4
COL.COLO4_11609 Corchorus olitorius HOM05D007433 ORTHO05D009199 6.8e-07 57.8 41 58.5
Hma1.2p1_3243F.1_g334320 Hydrangea macrophylla HOM05D007433 ORTHO05D009199 6.8e-07 57.8 111 42.3
Potri.014G007000 Populus trichocarpa HOM05D007433 ORTHO05D009199 6.8e-07 57.8 51 52.9
Thecc.01G075800 Theobroma cacao HOM05D007433 ORTHO05D009199 6.8e-07 57.8 42 57.1
Peaxi162Scf00618g00332 Petunia axillaris HOM05D003086 ORTHO05D003347 8.9e-07 57.4 54 46.3
Ca_23518_v3 Cicer arietinum L. HOM05D003086 ORTHO05D003347 2.0e-06 56.2 67 44.8
Gohir.A12G248300 Gossypium hirsutum HOM05D003086 ORTHO05D003347 2.0e-06 56.2 65 44.6
Gohir.D12G249000 Gossypium hirsutum HOM05D003086 ORTHO05D003347 2.0e-06 56.2 65 44.6
Nn3g18930 Nelumbo nucifera HOM05D003086 ORTHO05D003347 2.6e-06 55.8 64 48.4
Actinidia18664 Actinidia chinensis HOM05D003086 ORTHO05D003347 3.4e-06 55.5 68 47.1
CAN.G874.33 Capsicum annuum HOM05D003086 ORTHO05D003347 4.4e-06 55.1 52 44.2
Gorai.008G267200 Gossypium raimondii HOM05D003086 ORTHO05D003347 5.7e-06 54.7 65 44.6
Nitab4.5_0000015g0220 Nicotiana tabacum HOM05D003086 ORTHO05D003347 5.7e-06 54.7 53 43.4
Lsat_1_v5_gn_4_30961 Lactuca sativa HOM05D003086 ORTHO05D003347 7.5e-06 54.3 54 50.0
Sed0023695 Sechium edule HOM05D003086 ORTHO05D003347 7.5e-06 54.3 48 52.1
Solyc06g052060.3 Solanum lycopersicum HOM05D003086 ORTHO05D003347 7.5e-06 54.3 53 43.4
Sopen06g018110 Solanum pennellii HOM05D003086 ORTHO05D003347 7.5e-06 54.3 53 43.4
PGSC0003DMG400019607 Solanum tuberosum HOM05D003086 ORTHO05D003347 7.5e-06 54.3 53 43.4
Atru.chr3.1055 Acer truncatum HOM05D007433 ORTHO05D009199 9.8e-06 53.9 59 47.5
Dinv26956 Davidia involucrata HOM05D000754 ORTHO05D000169 9.8e-06 53.9 96 42.7
Duzib264G0228 Durio zibethinus HOM05D007433 ORTHO05D000169 9.8e-06 53.9 46 54.3
TPR.G20234 Trifolium pratense HOM05D003086 ORTHO05D003347 9.8e-06 53.9 65 44.6


User provided reference genes

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