Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0004073 Lotus japonicus HOM05D006438 ORTHO05D007998 0.0e+00 1251.1 653 100.0
Glyma.19G256300 Glycine max HOM05D006438 ORTHO05D007998 5.2e-295 1017.3 653 81.8
Glyma.03G257800 Glycine max HOM05D006438 ORTHO05D007998 9.2e-292 1006.5 648 81.5
Phvul.006G113600 Phaseolus vulgaris HOM05D006438 ORTHO05D007998 3.2e-284 981.5 648 79.2
Lalb_Chr18g0044491 Lupinus albus HOM05D006438 ORTHO05D007998 7.3e-281 970.3 652 78.2
Ca_09510_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.9e-279 963.8 654 76.8
Ca_30059_v3 Cicer arietinum L. HOM05D006438 ORTHO05D007998 6.9e-279 963.8 654 76.8
VMungo0540G1767 Vigna mungo HOM05D006438 ORTHO05D007998 2.3e-274 948.7 649 76.9
TPR.G4682 Trifolium pratense HOM05D006438 ORTHO05D007998 3.3e-265 918.3 628 76.6
Medtr7g117420 Medicago truncatula HOM05D006438 ORTHO05D007998 3.9e-258 894.8 631 75.0
Psat3g002440 Pisum sativum HOM05D006438 ORTHO05D007998 5.1e-258 894.4 654 73.1
arahy.Tifrunner.gnm1.ann1.QN4XTT Arachis hypogaea HOM05D006438 ORTHO05D007998 2.4e-255 885.6 647 73.9
arahy.Tifrunner.gnm1.ann1.TZA1ET Arachis hypogaea HOM05D006438 ORTHO05D007998 4.5e-254 881.3 645 74.0
QL06p050047 Quercus lobata HOM05D006438 ORTHO05D007998 4.4e-241 838.2 655 69.2
CiPaw.02G041100 Carya illinoinensis HOM05D006438 ORTHO05D007998 1.2e-238 830.1 646 69.8
QL11p022848 Quercus lobata HOM05D006438 ORTHO05D007998 1.4e-236 823.2 655 68.2
Cfa003796 Carpinus fangiana HOM05D006438 ORTHO05D007998 4.8e-232 808.1 656 67.8
Actinidia20246 Actinidia chinensis HOM05D006438 ORTHO05D007998 2.2e-229 799.3 640 67.0
Dinv32596 Davidia involucrata HOM05D006438 ORTHO05D007998 4.2e-228 795.0 656 65.7
Manes.13G078900 Manihot esculenta HOM05D006438 ORTHO05D007998 9.4e-228 793.9 651 66.5
Haze_15664 Corylus avellana HOM05D006438 ORTHO05D007998 1.2e-227 793.5 656 66.6
Prupe.2G189300 Prunus persica HOM05D006438 ORTHO05D007998 8.8e-226 787.3 644 65.8
vmacro13165 Vaccinium macrocarpon HOM05D006438 ORTHO05D007998 2.6e-225 785.8 641 66.3
FAN03G1123 Fragaria x ananassa HOM05D006438 ORTHO05D007998 6.3e-224 781.2 658 64.7
Lj7A500T115 Lonicera japonica HOM05D006438 ORTHO05D007998 9.1e-223 777.3 662 63.7
FAN10G0107 Fragaria x ananassa HOM05D006438 ORTHO05D007998 3.5e-222 775.4 658 64.1
TWI59G0942 Tripterygium wilfordii HOM05D006438 ORTHO05D007998 7.7e-222 774.2 648 65.0
RcHm_v2.0_Chr1g0359811 Rosa chinensis HOM05D006438 ORTHO05D007998 2.2e-221 772.7 668 63.5
FAN10G3447 Fragaria x ananassa HOM05D006438 ORTHO05D007998 8.5e-221 770.8 656 64.0
Rhsim07G0003900 Rhododendron simsii HOM05D006438 ORTHO05D007998 8.5e-221 770.8 645 65.9
FvH4_7g16650 Fragaria vesca HOM05D006438 ORTHO05D007998 1.5e-220 770.0 648 64.5
CSS0029538 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 1.9e-220 769.6 656 65.4
CSS0017951 Camellia sinensis var. sinensis HOM05D006438 ORTHO05D007998 4.2e-220 768.5 657 65.3
CANSAT56G2224 Cannabis sativa HOM05D006438 ORTHO05D007998 4.2e-220 768.5 657 63.0
Manes.13G077643 Manihot esculenta HOM05D006438 ORTHO05D007998 2.1e-219 766.1 651 65.1
MSTRG.17348 Avicennia marina HOM05D006438 ORTHO05D007998 3.0e-218 762.3 649 63.0
Thecc.01G341800 Theobroma cacao HOM05D006438 ORTHO05D007998 8.8e-218 760.8 678 63.4
Duzib138G1266 Durio zibethinus HOM05D006438 ORTHO05D007998 2.4e-215 752.7 675 61.9
Cpa.g.sc96.25 Carica papaya HOM05D006438 ORTHO05D007998 7.0e-215 751.1 659 64.0
MD07G1150500 Malus domestica HOM05D006438 ORTHO05D007998 1.2e-214 750.4 646 62.8
Sabra14G0072800 Salix brachista HOM05D006438 ORTHO05D007998 1.6e-214 750.0 653 63.6
DCAR_005393 Daucus carota HOM05D006438 ORTHO05D007998 1.7e-213 746.5 658 62.9
Potri.002G171600 Populus trichocarpa HOM05D006438 ORTHO05D007998 5.0e-213 745.0 658 62.9
GSVIVG01027157001 Vitis vinifera HOM05D006438 ORTHO05D007998 6.6e-213 744.6 655 62.9
Ciclev10019221m.g Citrus clementina HOM05D006438 ORTHO05D007998 1.9e-212 743.0 660 62.4
Nn3g18981 Nelumbo nucifera HOM05D006438 ORTHO05D007998 1.9e-212 743.0 655 61.7
PGSC0003DMG400000230 Solanum tuberosum HOM05D006438 ORTHO05D007998 4.2e-212 741.9 660 62.1
Migut.B01878 Erythranthe guttata HOM05D006438 ORTHO05D007998 5.5e-212 741.5 651 61.4
Gohir.A08G125100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.8e-211 739.2 664 61.9
Sopen01g039750 Solanum pennellii HOM05D006438 ORTHO05D007998 1.4e-210 736.9 667 61.9
Hund27192 Selenicereus undatus HOM05D006438 ORTHO05D007998 1.8e-210 736.5 682 60.1
Solyc01g096030.4 Solanum lycopersicum HOM05D006438 ORTHO05D007998 3.4e-209 732.3 663 61.8
FAN01G1234 Fragaria x ananassa HOM05D006438 ORTHO05D007998 7.5e-209 731.1 661 61.7
PSO170G3726 Papaver somniferum HOM05D006438 ORTHO05D007998 1.3e-208 730.3 652 61.7
MD01G1082100 Malus domestica HOM05D006438 ORTHO05D007998 1.7e-208 729.9 651 61.6
SGA_v2.0_scaffold5G03022 Striga asiatica HOM05D006438 ORTHO05D007998 2.2e-208 729.6 652 60.7
CAN.G1415.26 Capsicum annuum HOM05D006438 ORTHO05D007998 3.7e-208 728.8 668 61.4
Sc23g0002070 Simmondsia chinensis HOM05D006438 ORTHO05D007998 1.4e-207 726.9 683 59.2
Gohir.D08G146100 Gossypium hirsutum HOM05D006438 ORTHO05D007998 2.4e-207 726.1 655 61.8
Peaxi162Scf00786g00012 Petunia axillaris HOM05D006438 ORTHO05D007998 4.1e-207 725.3 659 60.4
ClCG06G001260 Citrullus lanatus HOM05D006438 ORTHO05D007998 1.6e-206 723.4 652 62.0
Gorai.004G151600 Gossypium raimondii HOM05D006438 ORTHO05D007998 1.6e-206 723.4 655 62.0
Nitab4.5_0013402g0010 Nicotiana tabacum HOM05D006438 ORTHO05D007998 3.5e-206 722.2 663 60.9
Nn1g00253 Nelumbo nucifera HOM05D006438 ORTHO05D007998 4.5e-206 721.8 648 60.8
PSO063G1116 Papaver somniferum HOM05D006438 ORTHO05D007998 4.5e-206 721.8 654 61.8
SalBow3G2635 Salvia bowleyana HOM05D006438 ORTHO05D007998 4.5e-206 721.8 651 59.1
EL10Ac1g00261 Beta vulgaris HOM05D006438 ORTHO05D007998 7.8e-206 721.1 665 59.4
ECA236G2598 Erigeron canadensis HOM05D006438 ORTHO05D007998 5.0e-205 718.4 640 61.6
Eucgr.A01924 Eucalyptus grandis HOM05D006438 ORTHO05D007998 7.3e-204 714.5 644 60.6
Nitab4.5_0000172g0480 Nicotiana tabacum HOM05D006438 ORTHO05D007998 7.3e-204 714.5 667 60.6
AUR62023453 Chenopodium quinoa HOM05D006438 ORTHO05D007998 8.9e-202 707.6 664 58.0
PGR031G2090 Punica granatum HOM05D006438 ORTHO05D007998 6.0e-198 694.9 648 59.1
HanXRQChr04g0120541 Helianthus annuus HOM05D006438 ORTHO05D007998 7.8e-198 694.5 641 60.8
MELO3C022408.2 Cucumis melo HOM05D006438 ORTHO05D007998 1.3e-197 693.7 649 61.2
Aqoxy5G04279 Aquilegia oxysepala HOM05D006438 ORTHO05D007998 1.9e-196 689.9 654 59.3
Ah.05g179490 Amaranthus hybridus HOM05D006438 ORTHO05D007998 5.2e-194 681.8 666 57.5
CsaV3_6G007190 Cucumis sativus L. HOM05D006438 ORTHO05D007998 2.6e-193 679.5 648 60.3
THA.LOC104817364 Tarenaya hassleriana HOM05D006438 ORTHO05D007998 2.4e-191 672.9 683 55.3
COL.COLO4_06280 Corchorus olitorius HOM05D006438 ORTHO05D007998 9.2e-191 671.0 603 61.0
Sed0005284 Sechium edule HOM05D006438 ORTHO05D007998 6.6e-189 664.8 654 58.1
Potri.014G099300 Populus trichocarpa HOM05D006438 ORTHO05D007998 1.1e-188 664.1 580 62.8
MBI07_g40678_MAGBIO Magnolia biondii HOM05D006438 ORTHO05D007998 1.8e-186 656.8 667 55.9
Aa31LG10G15790 Aethionema arabicum HOM05D006438 ORTHO05D007998 1.2e-182 644.0 672 55.2
Lsat_1_v5_gn_7_1020 Lactuca sativa HOM05D006438 ORTHO05D007998 1.0e-181 641.0 657 58.0
unitig_37.g12626 Utricularia gibba HOM05D006438 ORTHO05D007998 8.9e-178 627.9 622 56.9
AUR62004500 Chenopodium quinoa HOM05D006438 ORTHO05D007998 9.9e-177 624.4 651 54.1
AL5G44360 Arabidopsis lyrata HOM05D006438 ORTHO05D007998 6.0e-174 615.1 682 52.9
Sp5g01570 Schrenkiella parvula HOM05D006438 ORTHO05D007998 2.5e-172 609.8 686 51.2
HPP92_008818 Vanilla planifolia HOM05D006438 ORTHO05D007998 3.3e-172 609.4 684 50.9
Thhalv10005821m.g Eutrema salsugineum HOM05D006438 ORTHO05D007998 2.8e-171 606.3 681 52.0
ATR0602G124 Amborella trichopoda HOM05D006438 ORTHO05D007998 4.7e-171 605.5 679 52.4
Actinidia10144 Actinidia chinensis HOM05D006438 ORTHO05D007998 4.4e-169 599.0 473 65.5
CARHR172130 Cardamine hirsuta HOM05D006438 ORTHO05D007998 3.8e-168 595.9 686 51.2
Carub.0005s2854 Capsella rubella HOM05D006438 ORTHO05D007998 2.4e-167 593.2 679 50.8
AT3G61800 Arabidopsis thaliana HOM05D006438 ORTHO05D007998 4.2e-167 592.4 685 51.1
BraA07t30216Z Brassica rapa HOM05D006438 ORTHO05D007998 1.2e-166 590.9 680 51.2
A07p25760 Brassica napus HOM05D006438 ORTHO05D007998 6.0e-166 588.6 697 50.6
BolC6t37959H Brassica oleracea HOM05D006438 ORTHO05D007998 6.0e-166 588.6 684 51.3
C06p27980 Brassica napus HOM05D006438 ORTHO05D007998 8.7e-165 584.7 684 50.7
SEGI_11798 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.0e-136 491.5 689 44.0
Pp3c3_31410 Physcomitrium patens HOM05D006438 ORTHO05D007998 8.8e-125 451.8 696 39.9
Mapoly0002s0048 Marchantia polymorpha HOM05D006438 ORTHO05D007998 5.7e-124 449.1 690 39.6
Cc10_g13840 Coffea canephora HOM05D006438 ORTHO05D007998 1.7e-123 447.6 383 64.5
Dinv35119 Davidia involucrata HOM05D006438 ORTHO05D007998 2.4e-122 443.7 654 44.0
Zm00001eb378420 Zea mays HOM05D006438 ORTHO05D007998 2.6e-121 440.3 627 44.7
SMO365G0083 Selaginella moellendorffii HOM05D006438 ORTHO05D007998 1.7e-120 437.6 643 41.2
Atru.chr5.676 Acer truncatum HOM05D006438 ORTHO05D007998 1.1e-119 434.9 313 74.8
BcaC08g45166 Brassica carinata HOM05D006438 ORTHO05D007998 6.7e-117 425.6 565 45.3
CDE08G0794 Ceratophyllum demersum HOM05D006438 ORTHO05D007998 1.0e-104 385.2 365 57.0
SHI13317 Sapria himalayana HOM05D006438 ORTHO05D007998 2.7e-102 377.1 366 56.8
BcaC08g45168 Brassica carinata HOM05D006438 ORTHO05D007998 1.7e-96 357.8 321 60.7
Atru.chr5.675 Acer truncatum HOM05D006438 ORTHO05D007998 1.4e-74 285.0 244 63.9
AagrBONN_evm.TU.Sc2ySwM_368.299 Anthoceros agrestis HOM05D006438 ORTHO05D007998 1.1e-69 268.9 595 32.3
BcaC08g45167 Brassica carinata HOM05D006438 ORTHO05D007998 5.3e-53 213.4 245 51.4
SEGI_17110 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 2.0e-44 184.9 225 44.0
C08p42400 Brassica napus HOM05D006438 ORTHO05D007998 1.7e-43 181.8 325 38.8
BraA06t25827Z Brassica rapa HOM05D006438 ORTHO05D007998 6.0e-41 173.3 264 42.4
Sabra02G0141200 Salix brachista HOM05D006438 ORTHO05D007998 1.9e-26 125.2 357 28.9
SEGI_37113 Sequoiadendron giganteum HOM05D006438 ORTHO05D007998 1.7e-19 102.1 180 33.3
Zm00001eb167390 Zea mays HOM05D006438 ORTHO05D007998 3.7e-14 84.3 88 54.5
MCO15G002 Micromonas commoda HOM05D006438 ORTHO05D007998 3.9e-08 64.3 221 28.1
Aa31sc496G10 Aethionema arabicum HOM05D006438 ORTHO05D007998 2.2e-06 58.5 120 39.2


User provided reference genes

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