Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0003987 Lotus japonicus HOM05D008889 ORTHO05D009956 1.3e-58 229.6 119 100.0
Phvul.008G023501 Phaseolus vulgaris HOM05D008889 ORTHO05D009956 2.9e-42 175.3 127 77.2
Glyma.08G254600 Glycine max HOM05D008889 ORTHO05D009956 1.9e-38 162.5 130 76.2
Ca_23534_v3 Cicer arietinum L. HOM05D008889 ORTHO05D009956 1.8e-36 156.0 135 69.6
Lalb_Chr04g0258271 Lupinus albus HOM05D008889 ORTHO05D009956 1.8e-36 156.0 127 72.4
Lalb_Chr10g0092501 Lupinus albus HOM05D008889 ORTHO05D009956 4.5e-35 151.4 123 69.9
TPR.G3280 Trifolium pratense HOM05D008889 ORTHO05D009956 3.0e-31 138.7 133 69.2
Medtr7g017790 Medicago truncatula HOM05D008889 ORTHO05D009956 6.9e-28 127.5 128 65.6
Glyma.18G277500 Glycine max HOM05D008889 ORTHO05D009956 2.7e-24 115.5 100 70.0
Psat3g194040 Pisum sativum HOM05D008889 ORTHO05D009956 6.7e-23 110.9 134 56.7
MD17G1069000 Malus domestica HOM05D008889 ORTHO05D009956 8.8e-15 84.0 122 48.4
Manes.02G062300 Manihot esculenta HOM05D008889 ORTHO05D009956 2.2e-13 79.3 125 45.6
Sabra17G0089900 Salix brachista HOM05D008889 ORTHO05D009956 2.2e-13 79.3 120 48.3
TWI60G1323 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 2.2e-13 79.3 124 49.2
Potri.017G107000 Populus trichocarpa HOM05D008889 ORTHO05D009956 2.4e-12 75.9 122 47.5
Prupe.3G245600 Prunus persica HOM05D008889 ORTHO05D009956 2.4e-12 75.9 127 45.7
Sabra04G0073700 Salix brachista HOM05D008889 ORTHO05D009956 3.1e-12 75.5 95 54.7
Manes.01G105700 Manihot esculenta HOM05D008889 ORTHO05D009956 6.9e-12 74.3 118 46.6
CiPaw.04G050600 Carya illinoinensis HOM05D008889 ORTHO05D009956 1.7e-10 69.7 130 46.9
Potri.004G108840 Populus trichocarpa HOM05D008889 ORTHO05D009956 1.7e-10 69.7 115 49.6
FAN05G4365 Fragaria x ananassa HOM05D008889 ORTHO05D009956 5.0e-10 68.2 126 42.9
RcHm_v2.0_Chr2g0164181 Rosa chinensis HOM05D008889 ORTHO05D009956 6.5e-10 67.8 127 43.3
arahy.Tifrunner.gnm1.ann1.II05IL Arachis hypogaea HOM05D008889 ORTHO05D009956 1.1e-09 67.0 50 74.0
FAN02G0304 Fragaria x ananassa HOM05D008889 ORTHO05D009956 1.1e-09 67.0 127 40.9
Duzib133G1477 Durio zibethinus HOM05D008889 ORTHO05D009956 1.4e-09 66.6 136 42.6
FvH4_6g45950 Fragaria vesca HOM05D008889 ORTHO05D009956 1.4e-09 66.6 126 42.1
FAN14G5446 Fragaria x ananassa HOM05D008889 ORTHO05D009956 1.4e-09 66.6 126 42.1
Gorai.004G064000 Gossypium raimondii HOM05D009227 ORTHO05D009956 3.2e-09 65.5 80 51.2
Lsat_1_v5_gn_4_113140 Lactuca sativa HOM05D038017 ORTHO05D009802 3.2e-09 65.5 79 48.1
PSO478G2273 Papaver somniferum HOM05D042328 ORTHO05D009956 4.2e-09 65.1 118 44.9
CANSAT64G2743 Cannabis sativa HOM05D008889 ORTHO05D009956 5.5e-09 64.7 117 43.6
FAN09G2052 Fragaria x ananassa HOM05D008889 ORTHO05D009956 7.2e-09 64.3 126 41.3
Ciclev10013380m.g Citrus clementina HOM05D008889 ORTHO05D009956 1.6e-08 63.2 112 48.2
unitig_21.g20864 Utricularia gibba HOM05D011353 ORTHO05D009956 1.6e-08 63.2 86 46.5
Ca_02709_v3 Cicer arietinum L. HOM05D008563 ORTHO05D009956 2.1e-08 62.8 69 58.0
Gohir.D08G061900 Gossypium hirsutum HOM05D009227 ORTHO05D009956 2.7e-08 62.4 119 42.9
PSO017G1525 Papaver somniferum HOM05D042328 ORTHO05D009956 2.7e-08 62.4 118 44.1
QL02p063786 Quercus lobata HOM05D009227 ORTHO05D009956 2.7e-08 62.4 89 44.9
BcaB07g30061 Brassica carinata HOM05D009227 ORTHO05D009956 4.7e-08 61.6 77 54.5
A02p37090 Brassica napus HOM05D009227 ORTHO05D009956 7.9e-08 60.8 75 50.7
C02p56090 Brassica napus HOM05D009227 ORTHO05D009956 7.9e-08 60.8 75 50.7
BolC2t11666H Brassica oleracea HOM05D009227 ORTHO05D009956 7.9e-08 60.8 75 50.7
BraA02t08695Z Brassica rapa HOM05D009227 ORTHO05D009956 7.9e-08 60.8 75 50.7
CSS0016849 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 1.4e-07 60.1 120 40.0
Eucgr.J01434 Eucalyptus grandis HOM05D008889 ORTHO05D009956 2.3e-07 59.3 111 45.9
CSS0048960 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 3.0e-07 58.9 120 40.0
Gohir.D12G187700 Gossypium hirsutum HOM05D008563 ORTHO05D009802 5.1e-07 58.2 77 48.1
Gorai.008G201100 Gossypium raimondii HOM05D008563 ORTHO05D009802 5.1e-07 58.2 77 46.8
Sopen06g026600 Solanum pennellii HOM05D014920 ORTHO05D009802 5.1e-07 58.2 119 45.4
TWI34G1181 Tripterygium wilfordii HOM05D008889 ORTHO05D009956 5.1e-07 58.2 101 42.6
Gohir.A08G052300 Gossypium hirsutum HOM05D008889 ORTHO05D009956 6.7e-07 57.8 129 40.3
Psat5g232520 Pisum sativum HOM05D008563 ORTHO05D009802 6.7e-07 57.8 68 50.0
Thecc.04G112500 Theobroma cacao HOM05D008889 ORTHO05D009956 6.7e-07 57.8 101 43.6
unitig_744.g24288 Utricularia gibba HOM05D009227 ORTHO05D009956 6.7e-07 57.8 112 44.6
Solyc06g069340.1 Solanum lycopersicum HOM05D014920 ORTHO05D009802 8.8e-07 57.4 118 42.4
unitig_27.g25224 Utricularia gibba HOM05D008889 ORTHO05D009956 1.1e-06 57.0 79 49.4
Duzib084G1352 Durio zibethinus HOM05D008563 ORTHO05D009802 1.5e-06 56.6 133 37.6
Glyma.04G157900 Glycine max HOM05D008563 ORTHO05D009956 2.0e-06 56.2 100 42.0
PGSC0003DMG400004059 Solanum tuberosum HOM05D014920 ORTHO05D009802 2.0e-06 56.2 132 41.7
CSS0034251 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.6e-06 55.8 124 41.9
CSS0042453 Camellia sinensis var. sinensis HOM05D008563 ORTHO05D009802 2.6e-06 55.8 124 41.9
Psat4g045520 Pisum sativum HOM05D008563 ORTHO05D009802 4.4e-06 55.1 92 41.3
Duzib138G0287 Durio zibethinus HOM05D008889 ORTHO05D009956 5.7e-06 54.7 105 40.0
Medtr2g058870 Medicago truncatula HOM05D008563 ORTHO05D009956 5.7e-06 54.7 79 48.1
Os08g0486700 Oryza sativa ssp. japonica HOM05D038128 ORTHO05D037193 5.7e-06 54.7 75 46.7
AL7G51640 Arabidopsis lyrata HOM05D009227 ORTHO05D009956 7.4e-06 54.3 68 50.0
Carub.0007s3707 Capsella rubella HOM05D009227 ORTHO05D009956 7.4e-06 54.3 119 42.0
Lj4g0009196 Lotus japonicus HOM05D008563 ORTHO05D009802 7.4e-06 54.3 116 38.8
Sed0012187 Sechium edule HOM05D008563 ORTHO05D009802 9.7e-06 53.9 80 45.0


User provided reference genes

Program Settings