Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0003700 Lotus japonicus HOM05D007213 ORTHO05D009165 0.0e+00 1349.3 737 100.0
Glyma.01G245400 Glycine max HOM05D007213 ORTHO05D009165 3.9e-246 855.1 755 67.2
Ca_24332_v3 Cicer arietinum L. HOM05D007213 ORTHO05D009165 1.1e-240 837.0 735 67.9
TPR.G21615 Trifolium pratense HOM05D007213 ORTHO05D009165 2.9e-233 812.4 750 64.7
Medtr5g004630 Medicago truncatula HOM05D007213 ORTHO05D009165 1.6e-223 780.0 739 64.5
Phvul.002G054800 Phaseolus vulgaris HOM05D007213 ORTHO05D009165 3.0e-222 775.8 812 59.7
VMungo1215G3163 Vigna mungo HOM05D007213 ORTHO05D009165 2.7e-191 672.9 825 53.8
Cfa014177 Carpinus fangiana HOM05D007213 ORTHO05D009165 6.5e-185 651.7 769 53.6
GSVIVG01013472001 Vitis vinifera HOM05D007213 ORTHO05D009165 2.8e-180 636.3 689 56.3
Psat4g219720 Pisum sativum HOM05D007213 ORTHO05D009165 2.1e-175 620.2 696 56.8
Haze_22902 Corylus avellana HOM05D007213 ORTHO05D009165 3.0e-166 589.7 777 49.9
FAN04G0748 Fragaria x ananassa HOM05D007213 ORTHO05D009165 5.6e-160 568.9 737 49.0
Dinv35497 Davidia involucrata HOM05D007213 ORTHO05D009165 8.0e-159 565.1 773 48.4
Dinv05524 Davidia involucrata HOM05D007213 ORTHO05D009165 5.2e-158 562.4 845 46.4
Ciclev10000432m.g Citrus clementina HOM05D007213 ORTHO05D009165 9.8e-157 558.1 745 48.5
Nn5g31088 Nelumbo nucifera HOM05D007213 ORTHO05D009165 5.4e-155 552.4 811 45.6
FAN18G3120 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.5e-152 541.6 743 47.5
QL02p016552 Quercus lobata HOM05D007213 ORTHO05D009165 4.7e-151 539.3 782 47.2
CSS0032989 Camellia sinensis var. sinensis HOM05D007213 ORTHO05D009165 1.3e-148 531.2 872 42.9
Potri.002G000800 Populus trichocarpa HOM05D007213 ORTHO05D009165 1.3e-148 531.2 748 47.2
Aqoxy5G00918 Aquilegia oxysepala HOM05D007213 ORTHO05D009165 3.7e-148 529.6 800 44.6
PGSC0003DMG400025663 Solanum tuberosum HOM05D007213 ORTHO05D009165 2.1e-146 523.9 780 44.6
Thecc.07G095200 Theobroma cacao HOM05D007213 ORTHO05D009165 1.0e-145 521.5 744 46.4
Actinidia15534 Actinidia chinensis HOM05D007213 ORTHO05D009165 3.9e-145 519.6 829 43.1
Sabra02G0000800 Salix brachista HOM05D007213 ORTHO05D009165 7.3e-144 515.4 758 45.9
Rhsim06G0000200 Rhododendron simsii HOM05D007213 ORTHO05D009165 1.4e-142 511.1 808 43.4
Eucgr.F03636 Eucalyptus grandis HOM05D007213 ORTHO05D009165 4.0e-142 509.6 816 42.8
MBI01_g32846_MAGBIO Magnolia biondii HOM05D007213 ORTHO05D009165 8.9e-142 508.4 551 53.7
vmacro21731 Vaccinium macrocarpon HOM05D007213 ORTHO05D009165 1.3e-140 504.6 797 43.3
PSO017G1686 Papaver somniferum HOM05D007213 ORTHO05D009165 2.9e-140 503.4 782 44.1
Cpa.g.sc36.83 Carica papaya HOM05D007213 ORTHO05D009165 4.9e-140 502.7 741 45.1
EL10Ac5g11683 Beta vulgaris HOM05D007213 ORTHO05D009165 1.1e-139 501.5 797 42.5
AUR62036517 Chenopodium quinoa HOM05D007213 ORTHO05D009165 2.4e-139 500.4 797 42.5
FvH4_5g26850 Fragaria vesca HOM05D007213 ORTHO05D009165 2.4e-139 500.4 738 45.1
PSO170G0484 Papaver somniferum HOM05D007213 ORTHO05D009165 1.6e-138 497.7 787 44.0
CAN.G1330.34 Capsicum annuum HOM05D007213 ORTHO05D009165 4.6e-138 496.1 736 44.7
Gohir.A04G034000 Gossypium hirsutum HOM05D007213 ORTHO05D009165 6.0e-138 495.7 759 44.4
FAN13G0578 Fragaria x ananassa HOM05D007213 ORTHO05D009165 2.3e-137 493.8 739 44.9
Sed0002482 Sechium edule HOM05D007213 ORTHO05D009165 6.6e-137 492.3 732 44.7
FAN08G1354 Fragaria x ananassa HOM05D007213 ORTHO05D009165 9.6e-136 488.4 735 44.1
Gohir.D05G349200 Gossypium hirsutum HOM05D007213 ORTHO05D009165 2.1e-135 487.3 759 43.9
Actinidia17102 Actinidia chinensis HOM05D007213 ORTHO05D009165 4.7e-135 486.1 818 42.2
MD04G1004600 Malus domestica HOM05D007213 ORTHO05D009165 4.7e-135 486.1 756 44.4
AUR62042263 Chenopodium quinoa HOM05D007213 ORTHO05D009165 6.2e-135 485.7 793 41.5
Gorai.009G379100 Gossypium raimondii HOM05D007213 ORTHO05D009165 1.1e-134 485.0 786 43.3
Peaxi162Scf00385g01231 Petunia axillaris HOM05D007213 ORTHO05D009165 8.4e-132 475.3 735 43.7
HanXRQChr07g0204351 Helianthus annuus HOM05D007213 ORTHO05D009165 1.7e-129 467.6 808 41.1
ECA233G0001 Erigeron canadensis HOM05D007213 ORTHO05D009165 5.6e-128 462.6 745 41.7
Atru.chr13.12 Acer truncatum HOM05D007213 ORTHO05D009165 9.6e-128 461.8 790 41.3
CANSAT54G2751 Cannabis sativa HOM05D007213 ORTHO05D009165 2.8e-127 460.3 730 42.9
A05p07120 Brassica napus HOM05D007213 ORTHO05D009165 4.4e-125 453.0 732 42.5
BraA05t19677Z Brassica rapa HOM05D007213 ORTHO05D009165 9.9e-125 451.8 733 42.7
Lsat_1_v5_gn_8_25680 Lactuca sativa HOM05D007213 ORTHO05D009165 2.7e-122 443.7 827 39.5
Manes.05G113600 Manihot esculenta HOM05D007213 ORTHO05D009165 4.6e-122 443.0 771 40.5
COL.COLO4_36704 Corchorus olitorius HOM05D007213 ORTHO05D009165 6.0e-122 442.6 543 50.1
Cc10_g00050 Coffea canephora HOM05D007213 ORTHO05D009165 1.5e-120 438.0 775 40.4
Sp4g21590 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.3e-120 436.8 734 41.7
SpUn0018_0080 Schrenkiella parvula HOM05D007213 ORTHO05D009165 3.3e-120 436.8 734 41.7
TWI12G1047 Tripterygium wilfordii HOM05D007213 ORTHO05D009165 3.3e-120 436.8 743 42.7
AL6G36700 Arabidopsis lyrata HOM05D007213 ORTHO05D009165 5.6e-120 436.0 738 41.3
BcaB02g09137 Brassica carinata HOM05D007213 ORTHO05D009165 5.3e-118 429.5 735 41.9
RcHm_v2.0_Chr7g0217751 Rosa chinensis HOM05D007213 ORTHO05D009165 1.5e-117 427.9 743 41.7
DCAR_013347 Daucus carota HOM05D007213 ORTHO05D009165 4.5e-117 426.4 535 48.2
AT5G25070 Arabidopsis thaliana HOM05D007213 ORTHO05D009165 9.9e-117 425.2 749 41.0
CARHR285120 Cardamine hirsuta HOM05D007213 ORTHO05D009165 1.7e-116 424.5 736 41.2
CiPaw.07G129300 Carya illinoinensis HOM05D007213 ORTHO05D009165 1.9e-115 421.0 569 49.2
THA.LOC104801651 Tarenaya hassleriana HOM05D007213 ORTHO05D009165 7.1e-115 419.1 763 39.3
BolC4t22448H Brassica oleracea HOM05D007213 ORTHO05D009165 1.8e-113 414.5 730 40.8
Prupe.1G004400 Prunus persica HOM05D007213 ORTHO05D009165 1.8e-113 414.5 747 41.1
Thhalv10016307m.g Eutrema salsugineum HOM05D007213 ORTHO05D009165 3.0e-113 413.7 734 39.9
Eucgr.B01563 Eucalyptus grandis HOM05D007213 ORTHO05D009165 6.7e-113 412.5 400 58.8
C04p08490 Brassica napus HOM05D007213 ORTHO05D009165 2.8e-111 407.1 731 40.5
ATR0605G010 Amborella trichopoda HOM05D007213 ORTHO05D009165 2.2e-108 397.5 493 47.7
CDE06G2408 Ceratophyllum demersum HOM05D007213 ORTHO05D009165 8.7e-105 385.6 496 46.6
Eucgr.B03972 Eucalyptus grandis HOM05D007213 ORTHO05D009165 2.4e-102 377.5 420 54.3
PGR031G0765 Punica granatum HOM05D007213 ORTHO05D009165 3.7e-95 353.6 784 36.2
Nitab4.5_0003364g0010 Nicotiana tabacum HOM05D007213 ORTHO05D009165 7.7e-93 345.9 575 41.0
Glyma.03G099100 Glycine max HOM05D007213 ORTHO05D009165 1.1e-88 332.0 324 62.7
Zm00001eb035390 Zea mays HOM05D007213 ORTHO05D009165 1.1e-83 315.5 767 34.0
Aa31LG9G12510 Aethionema arabicum HOM05D007213 ORTHO05D009165 9.4e-83 312.4 757 34.5
BcaC02g12047 Brassica carinata HOM05D007213 ORTHO05D009165 6.7e-81 306.2 441 44.7
Sc07g0007610 Simmondsia chinensis HOM05D007213 ORTHO05D009165 9.4e-75 285.8 606 35.6
TAR381G1607 Trochodendron aralioides HOM05D007213 ORTHO05D009165 2.6e-72 277.7 266 60.5
Zm00001eb174530 Zea mays HOM05D007213 ORTHO05D009165 7.4e-72 276.2 779 31.5
Carub.0006s2290 Capsella rubella HOM05D007213 ORTHO05D009165 1.3e-71 275.4 735 34.3
HPP92_026844 Vanilla planifolia HOM05D007213 ORTHO05D009165 3.6e-66 257.3 389 41.6
TAR381G0309 Trochodendron aralioides HOM05D007213 ORTHO05D009165 7.5e-64 249.6 486 39.7
Mapoly0055s0021 Marchantia polymorpha HOM05D007213 ORTHO05D009165 8.5e-60 236.1 704 28.7
AagrBONN_evm.TU.Sc2ySwM_344.2101 Anthoceros agrestis HOM05D007213 ORTHO05D009165 9.5e-51 206.1 513 30.8
SMO239G0074 Selaginella moellendorffii HOM05D007213 ORTHO05D009165 1.3e-44 185.7 515 31.7
Hma1.2p1_0810F.1_g221910 Hydrangea macrophylla HOM05D007213 ORTHO05D009165 9.2e-38 162.9 184 53.3
SEGI_34531 Sequoiadendron giganteum HOM05D007213 ORTHO05D009165 9.2e-38 162.9 752 28.5
Actinidia08359 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.7e-28 132.1 343 35.9
Actinidia37289 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.7e-28 132.1 201 47.3
Oeu000728.1 Olea europaea HOM05D007213 ORTHO05D009165 5.1e-20 104.0 125 52.0
HPP92_026843 Vanilla planifolia HOM05D007213 ORTHO05D009165 6.2e-18 97.1 364 29.1
Actinidia08360 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.1e-14 86.3 81 64.2
HPP92_019587 Vanilla planifolia HOM05D007213 ORTHO05D009165 9.3e-14 83.2 133 37.6
Actinidia37290 Actinidia chinensis HOM05D007213 ORTHO05D009165 1.9e-11 75.5 132 42.4
ATR0605G187 Amborella trichopoda HOM05D007213 ORTHO05D009165 9.0e-09 66.6 214 31.3
Dinv19952 Davidia involucrata HOM05D007213 ORTHO05D009165 1.7e-07 62.4 69 49.3
HPP92_019588 Vanilla planifolia HOM05D007213 ORTHO05D009165 2.9e-07 61.6 131 38.9
Lsat_1_v5_gn_4_123560 Lactuca sativa HOM05D007213 ORTHO05D009165 1.4e-06 59.3 87 39.1
Lsat_1_v5_gn_4_171321 Lactuca sativa HOM05D007213 ORTHO05D009165 3.2e-06 58.2 87 37.9


User provided reference genes

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