Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 6.1e-67 257.3 126 100.0
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.3e-53 212.2 116 86.2
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 6.6e-53 210.7 116 86.2
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 1.1e-52 209.9 117 85.5
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 3.3e-52 208.4 116 84.5
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 2.3e-50 202.2 116 83.6
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 4.0e-50 201.4 117 82.9
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 6.8e-50 200.7 121 79.3
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 8.9e-50 200.3 117 82.9
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 2.0e-49 199.1 119 79.0
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 2.0e-49 199.1 117 81.2
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 3.4e-49 198.4 121 78.5
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 3.4e-49 198.4 117 82.1
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 1.1e-47 193.4 116 78.4
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 1.4e-47 193.0 116 78.4
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 4.1e-47 191.4 117 76.9
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 1.2e-46 189.9 117 74.4
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.6e-46 189.5 117 76.1
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 4.6e-46 188.0 119 74.8
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 6.0e-46 187.6 116 75.9
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.7e-45 186.0 117 72.6
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 1.7e-45 186.0 117 76.9
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 1.7e-45 186.0 117 73.5
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 1.7e-45 186.0 117 76.1
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 2.3e-45 185.7 116 72.4
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 3.9e-45 184.9 117 74.4
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 6.6e-45 184.1 117 74.4
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 8.6e-45 183.7 117 73.5
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 8.6e-45 183.7 117 73.5
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 8.6e-45 183.7 108 80.6
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 1.1e-44 183.3 117 72.6
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 1.5e-44 183.0 119 72.3
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.9e-44 182.6 119 71.4
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.5e-44 182.2 116 73.3
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 7.3e-44 180.6 118 71.2
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 9.5e-44 180.3 117 69.2
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 1.2e-43 179.9 117 74.4
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 1.2e-43 179.9 116 71.6
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 1.6e-43 179.5 117 71.8
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 1.6e-43 179.5 120 67.5
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 3.6e-43 178.3 107 78.5
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 3.6e-43 178.3 117 72.6
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 1.8e-42 176.0 117 70.1
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 4.0e-42 174.9 116 66.4
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 4.0e-42 174.9 117 70.1
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 5.2e-42 174.5 116 69.8
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 5.2e-42 174.5 117 69.2
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 1.2e-41 173.3 116 69.0
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.5e-41 172.9 120 70.8
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 2.6e-41 172.2 116 68.1
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 4.4e-41 171.4 117 65.8
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 4.4e-41 171.4 116 69.8
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 4.4e-41 171.4 115 69.6
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.3e-40 169.9 117 65.8
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.7e-40 169.5 144 60.4
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 2.2e-40 169.1 116 64.7
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 3.7e-40 168.3 117 64.1
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 6.4e-40 167.5 113 65.5
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 6.4e-40 167.5 113 66.4
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 6.4e-40 167.5 138 59.4
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 8.3e-40 167.2 116 63.8
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 1.4e-39 166.4 117 68.4
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 1.9e-39 166.0 113 65.5
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 1.9e-39 166.0 117 66.7
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.4e-39 165.6 116 64.7
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 2.4e-39 165.6 112 70.5
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 3.2e-39 165.2 113 64.6
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 3.2e-39 165.2 120 67.5
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 5.4e-39 164.5 116 63.8
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 5.4e-39 164.5 116 63.8
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 5.4e-39 164.5 116 63.8
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 5.4e-39 164.5 116 63.8
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 7.1e-39 164.1 101 76.2
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 4.6e-38 161.4 116 62.1
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 4.6e-38 161.4 119 67.2
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 2.3e-37 159.1 118 65.3
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 8.6e-37 157.1 100 70.0
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.2e-35 153.3 93 75.3
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 2.1e-35 152.5 117 60.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 4.4e-33 144.8 116 60.3
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 7.6e-33 144.1 117 63.2
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.1e-31 140.2 114 60.5
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 5.1e-29 131.3 117 53.8
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 8.1e-27 124.0 77 74.0
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 1.8e-26 122.9 79 73.4
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 2.2e-24 115.9 78 69.2
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 1.4e-23 113.2 111 48.6
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.6e-22 109.8 79 68.4
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.6e-22 109.8 110 48.2
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 2.5e-20 102.4 87 62.1
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.4e-18 96.7 106 48.1
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.5e-17 93.2 59 71.2
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 1.9e-12 76.3 85 47.1
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 3.3e-12 75.5 102 40.2
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 9.9e-09 63.9 92 42.4
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 3.8e-08 62.0 38 71.1


User provided reference genes

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