Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0003464 Lotus japonicus HOM05D008367 ORTHO05D010529 3.6e-98 361.7 195 100.0
Glyma.03G163200 Glycine max HOM05D008367 ORTHO05D010529 1.5e-48 196.8 194 64.4
Glyma.19G164700 Glycine max HOM05D008367 ORTHO05D010529 9.9e-48 194.1 194 63.4
Ca_08676_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 3.2e-46 189.1 192 60.9
Phvul.001G161100 Phaseolus vulgaris HOM05D008367 ORTHO05D010529 3.9e-44 182.2 193 60.1
Ca_08710_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 5.1e-44 181.8 192 59.9
Ca_08702_v3 Cicer arietinum L. HOM05D008367 ORTHO05D010529 1.1e-41 174.1 192 58.3
Medtr7g096950 Medicago truncatula HOM05D008367 ORTHO05D010529 5.2e-41 171.8 190 53.2
VMungo1383G3617 Vigna mungo HOM05D008367 ORTHO05D010529 1.1e-38 164.1 193 55.4
Psat3g056920 Pisum sativum HOM05D008367 ORTHO05D010529 3.0e-36 156.0 194 57.7
QL09p038772 Quercus lobata HOM05D008367 ORTHO05D010529 3.0e-36 156.0 197 52.3
Lalb_Chr01g0012251 Lupinus albus HOM05D008367 ORTHO05D010529 6.0e-29 131.7 189 49.7
Duzib138G1787 Durio zibethinus HOM05D008367 ORTHO05D010529 1.1e-25 120.9 195 43.6
Haze_24631 Corylus avellana HOM05D008367 ORTHO05D010529 3.1e-25 119.4 195 45.1
Cfa002424 Carpinus fangiana HOM05D008367 ORTHO05D010529 1.7e-23 113.6 200 42.0
CiPaw.03G264200 Carya illinoinensis HOM05D008367 ORTHO05D010529 1.7e-23 113.6 200 41.5
Ciclev10022407m.g Citrus clementina HOM05D008367 ORTHO05D010529 2.9e-23 112.8 203 40.9
Potri.005G224200 Populus trichocarpa HOM05D008367 ORTHO05D010529 4.9e-23 112.1 199 41.2
Manes.13G034100 Manihot esculenta HOM05D008367 ORTHO05D010529 1.4e-22 110.5 196 42.3
Sabra02G0030800 Salix brachista HOM05D008367 ORTHO05D010529 1.4e-22 110.5 208 38.9
Duzib133G0413 Durio zibethinus HOM05D008367 ORTHO05D010529 1.9e-22 110.2 196 42.9
Cpa.g.sc165.10 Carica papaya HOM05D008367 ORTHO05D010529 4.2e-22 109.0 191 43.5
MD05G1197200 Malus domestica HOM05D008367 ORTHO05D010529 9.3e-22 107.8 206 39.8
Rhsim01G0263900 Rhododendron simsii HOM05D008367 ORTHO05D010529 1.2e-21 107.5 203 38.9
Cc01_g18350 Coffea canephora HOM05D008367 ORTHO05D010529 1.6e-21 107.1 204 41.7
Potri.002G038400 Populus trichocarpa HOM05D008367 ORTHO05D010529 1.6e-21 107.1 194 41.2
FAN27G3501 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.9e-21 104.8 202 41.6
FAN20G2986 Fragaria x ananassa HOM05D004208 ORTHO05D005156 1.3e-20 104.0 201 41.8
Sabra05G0173000 Salix brachista HOM05D008367 ORTHO05D010529 1.8e-20 103.6 198 39.4
FvH4_2g21490 Fragaria vesca HOM05D008367 ORTHO05D010529 2.3e-20 103.2 196 41.3
RcHm_v2.0_Chr6g0288121 Rosa chinensis HOM05D008367 ORTHO05D010529 1.5e-19 100.5 196 41.8
Actinidia25788 Actinidia chinensis HOM05D008367 ORTHO05D010529 2.5e-19 99.8 195 41.0
Rhsim13G0035000 Rhododendron simsii HOM05D008367 ORTHO05D010529 3.3e-19 99.4 204 39.7
Hma1.2p1_0273F.1_g109700 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 7.4e-19 98.2 200 39.5
Hma1.2p1_0576F.1_g182070 Hydrangea macrophylla HOM05D008367 ORTHO05D010529 7.4e-19 98.2 197 37.1
Thecc.01G258200 Theobroma cacao HOM05D008367 ORTHO05D010529 2.1e-18 96.7 196 40.3
Prupe.8G223700 Prunus persica HOM05D008367 ORTHO05D010529 2.4e-17 93.2 200 38.5
Atru.chr5.1688 Acer truncatum HOM05D008367 ORTHO05D010529 3.1e-17 92.8 190 38.9
Gohir.D07G155080 Gossypium hirsutum HOM05D008367 ORTHO05D010529 5.3e-17 92.0 197 40.1
Gorai.001G177400 Gossypium raimondii HOM05D008367 ORTHO05D010529 5.3e-17 92.0 197 40.1
Actinidia09550 Actinidia chinensis HOM05D008367 ORTHO05D010529 9.0e-17 91.3 192 39.1
COL.COLO4_05894 Corchorus olitorius HOM05D008367 ORTHO05D010529 9.0e-17 91.3 209 39.2
CAN.G896.7 Capsicum annuum HOM05D008367 ORTHO05D010529 2.6e-16 89.7 201 37.8
Gohir.A07G148700 Gossypium hirsutum HOM05D008367 ORTHO05D010529 4.5e-16 89.0 196 38.3
Migut.N02203 Erythranthe guttata HOM05D008367 ORTHO05D010529 7.6e-16 88.2 199 34.7
FAN24G2300 Fragaria x ananassa HOM05D004208 ORTHO05D005156 7.6e-16 88.2 189 39.2
Actinidia27694 Actinidia chinensis HOM05D008367 ORTHO05D010529 1.4e-14 84.0 184 34.2
CANSAT01G1417 Cannabis sativa HOM05D008367 ORTHO05D010529 2.1e-13 80.1 218 37.2
Nitab4.5_0000470g0140 Nicotiana tabacum HOM05D008367 ORTHO05D010529 3.9e-12 75.9 200 37.0
Sopen09g028370 Solanum pennellii HOM05D008367 ORTHO05D010529 5.1e-12 75.5 187 34.2
Oeu025845.1 Olea europaea HOM05D008367 ORTHO05D010529 1.5e-11 73.9 200 33.5
PGSC0003DMG400010298 Solanum tuberosum HOM05D008367 ORTHO05D010529 2.5e-11 73.2 181 33.1
Dinv22407 Davidia involucrata HOM05D008367 ORTHO05D010529 4.3e-11 72.4 108 48.1
Eucgr.B01554 Eucalyptus grandis HOM05D008367 ORTHO05D010529 5.6e-11 72.0 178 34.3
DCAR_007739 Daucus carota HOM05D008367 ORTHO05D010529 7.4e-11 71.6 112 45.5
Prupe.1G039600 Prunus persica HOM05D007526 ORTHO05D009350 4.5e-08 62.4 226 27.4
SGA_v2.0_scaffold80G25773 Striga asiatica HOM05D008367 ORTHO05D010529 5.8e-08 62.0 191 29.8
VMungo0720G1630 Vigna mungo HOM05D007526 ORTHO05D009350 1.0e-07 61.2 194 30.4
Thecc.04G255400 Theobroma cacao HOM05D007526 ORTHO05D009350 4.9e-07 58.9 208 26.0
ECA236G2746 Erigeron canadensis HOM05D008367 ORTHO05D010529 8.4e-07 58.2 46 58.7
THA.LOC104814518 Tarenaya hassleriana HOM05D013395 ORTHO05D015261 1.1e-06 57.8 182 31.9
Lsat_1_v5_gn_8_93101 Lactuca sativa HOM05D008367 ORTHO05D010529 1.9e-06 57.0 181 32.0
Duzib151G1045 Durio zibethinus HOM05D007526 ORTHO05D009350 2.5e-06 56.6 207 28.5
Ciclev10005975m.g Citrus clementina HOM05D007526 ORTHO05D009350 3.2e-06 56.2 199 25.6
MBI07_g16245_MAGBIO Magnolia biondii HOM05D007526 ORTHO05D009350 3.2e-06 56.2 184 31.0
Rhsim13G0034900 Rhododendron simsii HOM05D009321 ORTHO05D010529 4.2e-06 55.8 80 45.0
Oeu055231.1 Olea europaea HOM05D007526 ORTHO05D009350 5.5e-06 55.5 206 29.6
Glyma.10G006400 Glycine max HOM05D007526 ORTHO05D009350 9.3e-06 54.7 217 28.6
TAR365G0977 Trochodendron aralioides HOM05D007526 ORTHO05D009350 9.3e-06 54.7 187 28.3


User provided reference genes

Program Settings