Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0003216 Lotus japonicus HOM05D007728 ORTHO05D009681 1.2e-245 852.8 444 100.0
Lj1g0027806 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-132 476.5 462 56.5
Lj3g0005611 Lotus japonicus HOM05D007728 ORTHO05D009681 6.8e-129 464.9 483 53.8
Lj1g0027147 Lotus japonicus HOM05D007728 ORTHO05D009681 8.3e-127 458.0 459 55.6
Lj6g0022050 Lotus japonicus HOM05D007728 ORTHO05D009681 1.2e-125 454.1 461 54.0
LjContig00357g0010761 Lotus japonicus HOM05D007728 ORTHO05D009681 2.7e-125 453.0 465 54.6
Lj1g0023634 Lotus japonicus HOM05D007728 ORTHO05D009681 2.1e-109 400.2 427 54.1
Lj1g0007911 Lotus japonicus HOM05D007728 ORTHO05D009681 8.4e-103 378.3 230 82.2
Lj5g0003789 Lotus japonicus HOM05D007728 ORTHO05D009681 1.0e-100 371.3 403 52.9
Lj6g0001515 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-95 353.6 395 51.6
Lj3g0004344 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-79 301.2 461 41.2
Lj1g0001720 Lotus japonicus HOM05D007728 ORTHO05D009681 8.4e-79 298.5 468 42.3
Lj2g0011761 Lotus japonicus HOM05D007728 ORTHO05D009681 7.9e-69 265.4 297 50.5
Lj4g0007695 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-65 254.2 510 36.3
Lj1g0018999 Lotus japonicus HOM05D007728 ORTHO05D009681 9.4e-62 241.9 364 42.6
Lj1g0006672 Lotus japonicus HOM05D007728 ORTHO05D009681 8.5e-39 165.6 241 43.2
Lj6g0011981 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-36 157.5 283 32.2
Lj4g0019282 Lotus japonicus HOM05D007728 ORTHO05D009681 2.6e-35 154.1 242 37.2
Lj5g0008262 Lotus japonicus HOM05D007728 ORTHO05D009681 7.0e-33 146.0 264 29.5
Lj1g0018604 Lotus japonicus HOM05D007728 ORTHO05D009681 1.2e-32 145.2 388 28.9
Lj2g0007737 Lotus japonicus HOM05D007728 ORTHO05D009681 7.7e-32 142.5 397 28.2
Lj3g0019926 Lotus japonicus HOM05D007728 ORTHO05D009681 1.7e-31 141.4 266 31.6
Lj4g0006777 Lotus japonicus HOM05D007728 ORTHO05D009681 4.2e-30 136.7 268 29.5
Medtr5g023720 Medicago truncatula HOM05D007728 ORTHO05D009681 4.2e-30 136.7 263 28.5
Lj3g0001236 Lotus japonicus HOM05D007728 ORTHO05D009681 2.0e-27 127.9 216 42.1
Lj3g0016118 Lotus japonicus HOM05D007728 ORTHO05D009681 2.2e-26 124.4 265 30.9
TPR.G37581 Trifolium pratense HOM05D007728 ORTHO05D009681 2.9e-26 124.0 254 27.6
Lj2g0021840 Lotus japonicus HOM05D007728 ORTHO05D009681 6.4e-26 122.9 235 30.6
Medtr6g471840 Medicago truncatula HOM05D007728 ORTHO05D009681 6.4e-26 122.9 259 29.3
Lj6g0010635 Lotus japonicus HOM05D007728 ORTHO05D009681 1.1e-25 122.1 263 28.5
Lj4g0000914 Lotus japonicus HOM05D007728 ORTHO05D009681 1.8e-25 121.3 271 27.7
Lj1g0017228 Lotus japonicus HOM05D007728 ORTHO05D009681 3.2e-25 120.6 144 49.3
arahy.Tifrunner.gnm1.ann1.AR083C Arachis hypogaea HOM05D038934 ORTHO05D021507 7.0e-25 119.4 260 31.2
Lj1g0008845 Lotus japonicus HOM05D002252 ORTHO05D002451 9.2e-25 119.0 272 27.6
Lj4g0000724 Lotus japonicus HOM05D002252 ORTHO05D002451 9.2e-25 119.0 272 27.6
Lj4g0017512 Lotus japonicus HOM05D007728 ORTHO05D009681 4.6e-24 116.7 309 27.2
Lj4g0023855 Lotus japonicus HOM05D007728 ORTHO05D009681 1.3e-23 115.2 173 33.5
Lj3g0002464 Lotus japonicus HOM05D007728 ORTHO05D009681 2.3e-23 114.4 189 31.7
Lj4g0000181 Lotus japonicus HOM05D007728 ORTHO05D009681 5.0e-23 113.2 250 29.2
Lj4g0001150 Lotus japonicus HOM05D007728 ORTHO05D009681 5.0e-23 113.2 250 29.2
Lj4g0018110 Lotus japonicus HOM05D007728 ORTHO05D009681 5.0e-23 113.2 249 28.9
Lj4g0023843 Lotus japonicus HOM05D007728 ORTHO05D009681 6.6e-23 112.8 250 29.2
TPR.G2699 Trifolium pratense HOM05D000045 ORTHO05D000067 1.2e-21 108.6 246 28.9
arahy.Tifrunner.gnm1.ann1.9R8PUV Arachis hypogaea HOM05D008607 ORTHO05D010784 2.8e-21 107.5 245 29.4
arahy.Tifrunner.gnm1.ann1.D9VETH Arachis hypogaea HOM05D008607 ORTHO05D010784 2.8e-21 107.5 275 28.7
arahy.Tifrunner.gnm1.ann1.CQ2DU1 Arachis hypogaea HOM05D008607 ORTHO05D010784 3.6e-21 107.1 239 30.1
arahy.Tifrunner.gnm1.ann1.UYMN7S Arachis hypogaea HOM05D008607 ORTHO05D010784 6.2e-21 106.3 242 29.3
arahy.Tifrunner.gnm1.ann1.F1MI29 Arachis hypogaea HOM05D008607 ORTHO05D010784 1.4e-20 105.1 271 28.0
arahy.Tifrunner.gnm1.ann1.6ZP1HE Arachis hypogaea HOM05D007728 ORTHO05D021507 6.8e-20 102.8 163 31.9
arahy.Tifrunner.gnm1.ann1.WWA99J Arachis hypogaea HOM05D008607 ORTHO05D010784 8.9e-20 102.4 237 29.1
Lj2g0002411 Lotus japonicus HOM05D007728 ORTHO05D009681 8.9e-20 102.4 157 45.9
Lj3g0006822 Lotus japonicus HOM05D040744 ORTHO05D009681 1.2e-19 102.1 261 26.4
Lj4g0027426 Lotus japonicus HOM05D007728 ORTHO05D009681 1.5e-19 101.7 274 28.8
Lj6g0022916 Lotus japonicus HOM05D007728 ORTHO05D009681 3.4e-19 100.5 302 26.2
arahy.Tifrunner.gnm1.ann1.IPN40Q Arachis hypogaea HOM05D008607 ORTHO05D010784 7.5e-19 99.4 235 28.5
Lj6g0019939 Lotus japonicus HOM05D007728 ORTHO05D009681 7.5e-19 99.4 209 29.7
arahy.Tifrunner.gnm1.ann1.NMLT85 Arachis hypogaea HOM05D007728 ORTHO05D021507 9.8e-19 99.0 244 26.6
arahy.Tifrunner.gnm1.ann1.FLR77E Arachis hypogaea HOM05D007728 ORTHO05D021507 1.3e-18 98.6 244 26.6
Lj5g0016739 Lotus japonicus HOM05D024850 ORTHO05D025768 1.7e-18 98.2 233 28.3
Lj4g0022567 Lotus japonicus HOM05D007728 ORTHO05D009681 2.9e-18 97.4 222 28.8
Medtr1g070355 Medicago truncatula HOM05D000045 ORTHO05D007522 6.4e-18 96.3 221 29.0
arahy.Tifrunner.gnm1.ann1.26YFK1 Arachis hypogaea HOM05D007728 ORTHO05D021507 1.4e-17 95.1 244 26.2
Lj5g0000777 Lotus japonicus HOM05D024850 ORTHO05D025768 2.4e-17 94.4 235 27.7
Lj5g0019189 Lotus japonicus HOM05D007728 ORTHO05D009681 3.2e-17 94.0 232 27.6
arahy.Tifrunner.gnm1.ann1.8HM2EW Arachis hypogaea HOM05D008607 ORTHO05D010784 1.2e-16 92.0 193 32.1
arahy.Tifrunner.gnm1.ann1.WZZH7X Arachis hypogaea HOM05D008607 ORTHO05D010784 1.2e-16 92.0 193 32.1
arahy.Tifrunner.gnm1.ann1.K8WX4Q Arachis hypogaea HOM05D014551 ORTHO05D009681 2.7e-16 90.9 263 26.6
Medtr3g023970 Medicago truncatula HOM05D007728 ORTHO05D022933 6.0e-16 89.7 327 25.4
TPR.G35664 Trifolium pratense HOM05D007728 ORTHO05D025857 7.8e-16 89.4 114 39.5
arahy.Tifrunner.gnm1.ann1.E3DKLZ Arachis hypogaea HOM05D009036 ORTHO05D011872 1.0e-15 89.0 265 25.7
Lj1g0024522 Lotus japonicus HOM05D007728 ORTHO05D009681 3.0e-15 87.4 207 26.1
Lj4g0015611 Lotus japonicus HOM05D007728 ORTHO05D009681 5.6e-14 83.2 221 29.0
Lj4g0006061 Lotus japonicus HOM05D007728 ORTHO05D009681 7.3e-14 82.8 175 26.9
Medtr6g045620 Medicago truncatula HOM05D007728 ORTHO05D010784 7.3e-14 82.8 139 37.4
arahy.Tifrunner.gnm1.ann1.LCEB5E Arachis hypogaea HOM05D009036 ORTHO05D011872 1.8e-12 78.2 269 23.4
Lj1g0022308 Lotus japonicus HOM05D024850 ORTHO05D025768 3.1e-12 77.4 158 29.1
arahy.Tifrunner.gnm1.ann1.2QX347 Arachis hypogaea HOM05D009036 ORTHO05D011872 4.0e-12 77.0 269 23.0
arahy.Tifrunner.gnm1.ann1.7H371A Arachis hypogaea HOM05D009036 ORTHO05D011872 5.2e-12 76.6 272 24.6
Lj3g0012082 Lotus japonicus HOM05D007728 ORTHO05D009681 6.8e-12 76.3 233 27.0
arahy.Tifrunner.gnm1.ann1.LVQ59A Arachis hypogaea HOM05D008607 ORTHO05D010784 1.5e-11 75.1 191 30.4
Lj1g0000596 Lotus japonicus HOM05D007728 ORTHO05D009681 4.4e-11 73.6 103 32.0
TPR.G37698 Trifolium pratense HOM05D007728 ORTHO05D025857 9.8e-11 72.4 152 28.3
arahy.Tifrunner.gnm1.ann1.NU7MFM Arachis hypogaea HOM05D009036 ORTHO05D085799 2.2e-10 71.2 246 24.8
Medtr0268s0040 Medicago truncatula HOM05D035021 ORTHO05D022933 4.9e-10 70.1 162 25.3
arahy.Tifrunner.gnm1.ann1.RT05UY Arachis hypogaea HOM05D009036 ORTHO05D011872 6.4e-10 69.7 268 24.3
Lj5g0026008 Lotus japonicus HOM05D016573 ORTHO05D009681 6.4e-10 69.7 159 28.3
arahy.Tifrunner.gnm1.ann1.DQEM0F Arachis hypogaea HOM05D009036 ORTHO05D011872 1.1e-09 68.9 269 23.4
Medtr6g061910 Medicago truncatula HOM05D035021 ORTHO05D022933 1.1e-09 68.9 162 25.3
arahy.Tifrunner.gnm1.ann1.7CZB22 Arachis hypogaea HOM05D009036 ORTHO05D011872 1.4e-09 68.6 153 26.1
arahy.Tifrunner.gnm1.ann1.F05QJ0 Arachis hypogaea HOM05D000023 ORTHO05D000014 1.9e-09 68.2 256 24.6
arahy.Tifrunner.gnm1.ann1.AXL83M Arachis hypogaea HOM05D008645 ORTHO05D007788 2.4e-09 67.8 378 24.3
Lj1g0002377 Lotus japonicus HOM05D024850 ORTHO05D025768 2.4e-09 67.8 149 27.5
Lalb_Chr06g0171961 Lupinus albus HOM05D007728 ORTHO05D009681 9.2e-09 65.9 123 28.5
arahy.Tifrunner.gnm1.ann1.CYJA9T Arachis hypogaea HOM05D007728 ORTHO05D009681 1.6e-08 65.1 260 22.7
Lj2g0015274 Lotus japonicus HOM05D007728 ORTHO05D009681 2.7e-08 64.3 82 46.3
Glyma.05G077850 Glycine max HOM05D007728 ORTHO05D009681 6.0e-08 63.2 89 32.6
Lj5g0007568 Lotus japonicus HOM05D007728 ORTHO05D009681 6.0e-08 63.2 277 24.9
arahy.Tifrunner.gnm1.ann1.PRU9CS Arachis hypogaea HOM05D009036 ORTHO05D011872 1.0e-07 62.4 176 23.3
Medtr5g054010 Medicago truncatula HOM05D035021 ORTHO05D022933 1.3e-07 62.0 145 26.9
arahy.Tifrunner.gnm1.ann1.P8R7I9 Arachis hypogaea HOM05D009036 ORTHO05D011872 1.7e-07 61.6 168 26.2
TPR.G39856 Trifolium pratense HOM05D007728 ORTHO05D025857 2.3e-07 61.2 85 37.6
arahy.Tifrunner.gnm1.ann1.4TSV6W Arachis hypogaea HOM05D008645 ORTHO05D007788 3.9e-07 60.5 268 22.8
arahy.Tifrunner.gnm1.ann1.63191C Arachis hypogaea HOM05D014551 ORTHO05D009681 3.9e-07 60.5 314 22.9
arahy.Tifrunner.gnm1.ann1.GI9T10 Arachis hypogaea HOM05D008645 ORTHO05D007788 3.9e-07 60.5 268 22.8
arahy.Tifrunner.gnm1.ann1.E81N8H Arachis hypogaea HOM05D009036 ORTHO05D011872 6.6e-07 59.7 223 22.0
Lj1g0016589 Lotus japonicus HOM05D007728 ORTHO05D009681 8.6e-07 59.3 106 30.2
arahy.Tifrunner.gnm1.ann1.3VIF24 Arachis hypogaea HOM05D009036 ORTHO05D011872 2.5e-06 57.8 304 25.0
Lj1g0024226 Lotus japonicus HOM05D007728 ORTHO05D036499 2.5e-06 57.8 99 31.3
Lj5g0015834 Lotus japonicus HOM05D007728 ORTHO05D036499 2.5e-06 57.8 99 31.3
arahy.Tifrunner.gnm1.ann1.M7A2ZD Arachis hypogaea HOM05D038934 ORTHO05D021507 4.3e-06 57.0 233 25.3
arahy.Tifrunner.gnm1.ann1.RA57MB Arachis hypogaea HOM05D008645 ORTHO05D007788 4.3e-06 57.0 269 23.4
Lj2g0027504 Lotus japonicus HOM05D009725 ORTHO05D007788 7.3e-06 56.2 172 23.3
Medtr4g040020 Medicago truncatula HOM05D009725 ORTHO05D007788 7.3e-06 56.2 170 22.4


User provided reference genes

Program Settings