Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0002851 Lotus japonicus HOM05D002637 ORTHO05D008095 2.7e-191 671.8 328 100.0
Glyma.13G187300 Glycine max HOM05D002637 ORTHO05D008095 7.7e-154 547.4 328 83.2
Phvul.011G190700 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 1.6e-146 523.1 328 79.3
VMungo1127G0026 Vigna mungo HOM05D002637 ORTHO05D008095 2.9e-145 518.8 325 79.1
Lalb_Chr03g0040331 Lupinus albus HOM05D002637 ORTHO05D008095 4.0e-142 508.4 330 75.5
Psat0s4320g0040 Pisum sativum HOM05D002637 ORTHO05D008095 4.9e-140 501.5 328 76.8
Medtr7g407140 Medicago truncatula HOM05D002637 ORTHO05D008095 1.8e-139 499.6 325 78.5
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 2.0e-138 496.1 328 76.2
arahy.Tifrunner.gnm1.ann1.XZZ81X Arachis hypogaea HOM05D002637 ORTHO05D008095 3.5e-138 495.4 328 76.8
Ca_04041_v3 Cicer arietinum L. HOM05D002637 ORTHO05D008095 6.4e-124 448.0 289 77.2
GSVIVG01018268001 Vitis vinifera HOM05D002637 ORTHO05D008095 5.6e-120 434.9 328 64.9
QL04p030554 Quercus lobata HOM05D002637 ORTHO05D008095 3.6e-119 432.2 344 64.2
Dinv43626 Davidia involucrata HOM05D002637 ORTHO05D008095 3.1e-118 429.1 330 63.6
CSS0015236 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 4.0e-118 428.7 328 63.4
CSS0036120 Camellia sinensis var. sinensis HOM05D002637 ORTHO05D008095 1.5e-117 426.8 328 62.8
Hma1.2p1_0405F.1_g145580 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.4e-117 425.2 329 64.4
Hma1.2p1_3157F.1_g333383 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 4.4e-117 425.2 329 64.4
Haze_02837 Corylus avellana HOM05D002637 ORTHO05D008095 7.5e-117 424.5 331 64.4
Atru.chr5.146 Acer truncatum HOM05D002637 ORTHO05D008095 6.4e-116 421.4 330 63.0
Cfa011079 Carpinus fangiana HOM05D002637 ORTHO05D008095 1.4e-115 420.2 328 64.0
Potri.002G137300 Populus trichocarpa HOM05D002637 ORTHO05D008095 1.7e-113 413.3 327 63.0
Ciclev10021077m.g Citrus clementina HOM05D002637 ORTHO05D008095 3.9e-113 412.1 335 60.9
Duzib133G1175 Durio zibethinus HOM05D002637 ORTHO05D008095 3.9e-113 412.1 330 62.1
Thecc.01G393500 Theobroma cacao HOM05D002637 ORTHO05D008095 6.6e-113 411.4 333 62.2
TWI59G1212 Tripterygium wilfordii HOM05D002637 ORTHO05D008095 5.2e-110 401.7 330 60.9
RcHm_v2.0_Chr1g0347591 Rosa chinensis HOM05D002637 ORTHO05D008095 6.8e-110 401.4 331 63.4
Manes.01G272700 Manihot esculenta HOM05D002637 ORTHO05D008095 1.5e-109 400.2 328 60.1
Gorai.004G071300 Gossypium raimondii HOM05D002637 ORTHO05D008095 4.4e-109 398.7 328 59.8
Prupe.2G132600 Prunus persica HOM05D002637 ORTHO05D008095 1.3e-108 397.1 334 59.0
Gohir.A08G058900 Gossypium hirsutum HOM05D002637 ORTHO05D008095 2.2e-108 396.4 328 59.5
Gohir.D08G068100 Gossypium hirsutum HOM05D002637 ORTHO05D008095 6.4e-108 394.8 328 59.5
Nn1g00861 Nelumbo nucifera HOM05D002637 ORTHO05D008095 6.4e-108 394.8 329 60.8
FAN03G3044 Fragaria x ananassa HOM05D002637 ORTHO05D008095 1.4e-107 393.7 332 63.3
Nitab4.5_0003553g0010 Nicotiana tabacum HOM05D002637 ORTHO05D008095 1.6e-106 390.2 329 58.4
Cc02_g25040 Coffea canephora HOM05D002637 ORTHO05D008095 2.1e-106 389.8 330 60.9
CsaV3_3G007610 Cucumis sativus L. HOM05D002637 ORTHO05D008095 3.5e-106 389.0 330 60.0
FvH4_7g09990 Fragaria vesca HOM05D002637 ORTHO05D008095 4.6e-106 388.7 332 62.3
Solyc01g090380.3 Solanum lycopersicum HOM05D002637 ORTHO05D008095 4.6e-106 388.7 329 58.7
Sopen01g036170 Solanum pennellii HOM05D002637 ORTHO05D008095 4.6e-106 388.7 329 58.7
Cpa.g.sc166.42 Carica papaya HOM05D002637 ORTHO05D008095 6.0e-106 388.3 330 58.8
Peaxi162Scf00030g00416 Petunia axillaris HOM05D002637 ORTHO05D008095 6.0e-106 388.3 332 57.8
MELO3C005982.2 Cucumis melo HOM05D002637 ORTHO05D008095 1.3e-105 387.1 328 58.2
ECA240G0640 Erigeron canadensis HOM05D002637 ORTHO05D008095 1.7e-105 386.7 328 57.3
Nitab4.5_0003696g0060 Nicotiana tabacum HOM05D002637 ORTHO05D008095 2.3e-105 386.3 329 57.8
MSTRG.20697 Avicennia marina HOM05D002637 ORTHO05D008095 3.0e-105 386.0 329 59.9
Sed0022781 Sechium edule HOM05D002637 ORTHO05D008095 8.6e-105 384.4 327 59.9
FAN06G0182 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.3e-104 382.5 339 61.4
FAN06G4488 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.3e-104 382.1 339 61.4
Oeu063231.1 Olea europaea HOM05D002637 ORTHO05D008095 4.3e-104 382.1 330 57.6
THA.LOC104827587 Tarenaya hassleriana HOM05D002637 ORTHO05D008095 4.3e-104 382.1 330 56.4
Carub.0004s2744 Capsella rubella HOM05D002637 ORTHO05D008095 5.6e-104 381.7 329 56.2
PGSC0003DMG402026045 Solanum tuberosum HOM05D002637 ORTHO05D008095 7.3e-104 381.3 334 57.2
Eucgr.D01520 Eucalyptus grandis HOM05D002637 ORTHO05D008095 9.6e-104 380.9 331 57.4
HanXRQChr13g0423181 Helianthus annuus HOM05D002637 ORTHO05D008095 1.6e-103 380.2 328 57.0
Actinidia12150 Actinidia chinensis HOM05D002637 ORTHO05D008095 2.8e-103 379.4 301 63.1
ClCG05G000440 Citrullus lanatus HOM05D002637 ORTHO05D008095 8.1e-103 377.9 327 58.1
Lsat_1_v5_gn_3_131600 Lactuca sativa HOM05D002637 ORTHO05D008095 6.8e-102 374.8 328 55.5
COL.COLO4_12421 Corchorus olitorius HOM05D002637 ORTHO05D008095 1.3e-100 370.5 298 63.1
CAN.G362.5 Capsicum annuum HOM05D002637 ORTHO05D008095 1.7e-100 370.2 338 55.3
PGR004G1933 Punica granatum HOM05D002637 ORTHO05D008095 2.2e-100 369.8 330 55.2
MD07G1104800 Malus domestica HOM05D002637 ORTHO05D008095 4.9e-100 368.6 303 62.4
Rhsim07G0035200 Rhododendron simsii HOM05D002637 ORTHO05D008095 4.9e-100 368.6 323 58.5
Lj7A545T102 Lonicera japonica HOM05D002637 ORTHO05D008095 8.4e-100 367.9 329 56.2
CANSAT64G0516 Cannabis sativa HOM05D002637 ORTHO05D008095 5.4e-99 365.2 330 57.0
Aa31LG1G26400 Aethionema arabicum HOM05D002637 ORTHO05D008095 1.2e-98 364.0 345 51.3
FAN10G1960 Fragaria x ananassa HOM05D002637 ORTHO05D008095 4.6e-98 362.1 340 58.2
SGA_v2.0_scaffold153G36910 Striga asiatica HOM05D002637 ORTHO05D008095 5.1e-97 358.6 327 56.0
Aqoxy3G02741 Aquilegia oxysepala HOM05D002637 ORTHO05D008095 1.1e-96 357.5 336 54.5
Thhalv10001543m.g Eutrema salsugineum HOM05D002637 ORTHO05D008095 1.1e-96 357.5 335 53.7
AL4G43950 Arabidopsis lyrata HOM05D002637 ORTHO05D008095 1.5e-96 357.1 333 52.9
Migut.B01542 Erythranthe guttata HOM05D002637 ORTHO05D008095 1.5e-96 357.1 330 56.4
EL10Ac1g00753 Beta vulgaris HOM05D002637 ORTHO05D008095 5.6e-96 355.1 327 57.2
PSO063G7293 Papaver somniferum HOM05D002637 ORTHO05D008095 5.6e-96 355.1 335 52.8
Sabra02G0106200 Salix brachista HOM05D001766 ORTHO05D001875 1.3e-95 354.0 365 52.6
AUR62021542 Chenopodium quinoa HOM05D002637 ORTHO05D008095 2.8e-95 352.8 327 54.4
Sc26g0001610 Simmondsia chinensis HOM05D002637 ORTHO05D008095 3.1e-94 349.4 328 54.0
CARHR140110 Cardamine hirsuta HOM05D002637 ORTHO05D008095 2.0e-93 346.7 335 53.4
Sp4g26950 Schrenkiella parvula HOM05D002637 ORTHO05D008095 3.4e-93 345.9 334 51.5
AUR62008551 Chenopodium quinoa HOM05D002637 ORTHO05D008095 5.8e-93 345.1 331 53.8
BcaC02g07119 Brassica carinata HOM05D002637 ORTHO05D008095 8.4e-92 341.3 328 52.7
A04p33520 Brassica napus HOM05D002637 ORTHO05D008095 8.4e-92 341.3 328 52.4
C04p71280 Brassica napus HOM05D002637 ORTHO05D008095 1.9e-91 340.1 330 53.6
BolC4t28632H Brassica oleracea HOM05D002637 ORTHO05D008095 1.9e-91 340.1 330 53.6
vmacro13491 Vaccinium macrocarpon HOM05D002637 ORTHO05D008095 7.1e-91 338.2 295 57.6
BcaB06g29403 Brassica carinata HOM05D002637 ORTHO05D008095 2.7e-90 336.3 330 53.0
BraA04t18814Z Brassica rapa HOM05D002637 ORTHO05D008095 3.5e-90 335.9 329 52.3
CiPaw.13G027200 Carya illinoinensis HOM05D002637 ORTHO05D008095 2.3e-89 333.2 268 61.9
AT2G44850 Arabidopsis thaliana HOM05D002637 ORTHO05D008095 3.9e-89 332.4 292 55.1
unitig_8.g3841 Utricularia gibba HOM05D002637 ORTHO05D008095 2.9e-84 316.2 322 50.0
CDE09G0379 Ceratophyllum demersum HOM05D002637 ORTHO05D008095 3.8e-84 315.8 335 51.6
SHI13611 Sapria himalayana HOM05D002637 ORTHO05D008095 3.2e-83 312.8 336 50.3
DCAR_015837 Daucus carota HOM05D002637 ORTHO05D008095 1.5e-77 293.9 329 49.5
Prupe.2G128900 Prunus persica HOM05D002637 ORTHO05D008095 2.6e-77 293.1 335 49.9
PSO782G4032 Papaver somniferum HOM05D002637 ORTHO05D008095 3.9e-73 279.3 330 43.9
Hund17095 Selenicereus undatus HOM05D002637 ORTHO05D008095 1.1e-72 277.7 267 55.8
Os02g0655100 Oryza sativa ssp. japonica HOM05D002637 ORTHO05D008095 1.4e-70 270.8 336 43.8
Zm00001eb186370 Zea mays HOM05D002637 ORTHO05D008095 1.2e-69 267.7 339 42.5
HPP92_014683 Vanilla planifolia HOM05D002637 ORTHO05D008095 2.0e-69 266.9 330 45.8
Eucgr.D01526 Eucalyptus grandis HOM05D002637 ORTHO05D008095 2.6e-69 266.5 262 53.1
ATR0057G061 Amborella trichopoda HOM05D002637 ORTHO05D008095 7.2e-67 258.5 350 43.1
AagrBONN_evm.TU.Sc2ySwM_117.1982 Anthoceros agrestis HOM05D002637 ORTHO05D008095 8.7e-65 251.5 335 43.3
Pp3c4_13850 Physcomitrium patens HOM05D002637 ORTHO05D008095 6.3e-63 245.4 383 38.4
Pp3c12_10320 Physcomitrium patens HOM05D002637 ORTHO05D008095 1.2e-61 241.1 384 37.8
TPR.G28606 Trifolium pratense HOM05D002637 ORTHO05D008095 2.9e-60 236.5 139 83.5
SalBow5G4529 Salvia bowleyana HOM05D002637 ORTHO05D008095 1.9e-59 233.8 181 61.9
TAR629G1915 Trochodendron aralioides HOM05D002637 ORTHO05D008095 1.9e-59 233.8 186 61.3
Medtr7g407110 Medicago truncatula HOM05D002637 ORTHO05D008095 5.3e-46 189.1 118 79.7
Hma1.2p1_2406F.1_g321490 Hydrangea macrophylla HOM05D002637 ORTHO05D008095 7.2e-43 178.7 169 58.6
Ah.05g177920 Amaranthus hybridus HOM05D002637 ORTHO05D008095 1.4e-41 174.5 133 62.4
TPR.G36686 Trifolium pratense HOM05D002637 ORTHO05D008095 8.2e-39 165.2 110 77.3
TPR.G7688 Trifolium pratense HOM05D002637 ORTHO05D008095 8.2e-39 165.2 122 68.0
Phvul.011G167200 Phaseolus vulgaris HOM05D002637 ORTHO05D008095 3.5e-37 159.8 271 41.0
SEGI_39924 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 2.2e-36 157.1 134 55.2
CBR_g61261 Chara braunii HOM05D002637 ORTHO05D008095 1.5e-35 154.5 324 34.0
MBI04_g07220_MAGBIO Magnolia biondii HOM05D002637 ORTHO05D008095 2.7e-34 150.2 98 69.4
TPR.G32964 Trifolium pratense HOM05D002637 ORTHO05D008095 2.7e-34 150.2 87 85.1
Medtr7g006510 Medicago truncatula HOM05D002637 ORTHO05D008095 1.2e-32 144.8 106 66.0
SEGI_14087 Sequoiadendron giganteum HOM05D002637 ORTHO05D008095 7.5e-32 142.1 199 42.2
Atru.chr5.3330 Acer truncatum HOM05D002637 ORTHO05D008095 3.3e-19 100.1 144 41.0
Cre03.g181600 Chlamydomonas reinhardtii HOM05D002637 ORTHO05D008095 5.7e-16 89.4 318 25.2
FAN06G2370 Fragaria x ananassa HOM05D002637 ORTHO05D008095 3.2e-14 83.6 59 66.1
Aa31LG7G11720 Aethionema arabicum HOM05D002637 ORTHO05D008095 5.4e-14 82.8 67 56.7
Atru.chr5.3333 Acer truncatum HOM05D000263 ORTHO05D000213 3.9e-12 76.6 96 50.0
TAR629G2985 Trochodendron aralioides HOM05D002637 ORTHO05D008095 2.1e-10 70.9 50 62.0
Atru.chr5.3338 Acer truncatum HOM05D002637 ORTHO05D008095 2.6e-08 63.9 47 63.8


User provided reference genes

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