Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0002079 Lotus japonicus HOM05D008013 ORTHO05D010149 3.8e-39 164.5 88 100.0
Lalb_Chr19g0126801 Lupinus albus HOM05D008013 ORTHO05D010149 5.1e-36 154.1 88 93.2
Glyma.09G252532 Glycine max HOM05D008013 ORTHO05D010149 1.5e-35 152.5 84 95.2
TPR.G29412 Trifolium pratense HOM05D008013 ORTHO05D010149 1.5e-35 152.5 88 90.9
Glyma.18G240151 Glycine max HOM05D008013 ORTHO05D010149 3.3e-35 151.4 84 96.4
Phvul.008G056200 Phaseolus vulgaris HOM05D008013 ORTHO05D010149 2.8e-34 148.3 87 90.8
Actinidia34775 Actinidia chinensis HOM05D008013 ORTHO05D010149 4.0e-33 144.4 88 83.0
CiPaw.08G117300 Carya illinoinensis HOM05D008013 ORTHO05D010149 2.6e-32 141.7 88 81.8
Haze_04520 Corylus avellana HOM05D008013 ORTHO05D010149 2.6e-32 141.7 88 83.0
Thecc.05G204600 Theobroma cacao HOM05D008013 ORTHO05D010149 3.4e-32 141.4 88 83.0
CSS0003713 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 3.8e-31 137.9 88 79.5
CSS0043393 Camellia sinensis var. sinensis HOM05D008013 ORTHO05D010149 3.8e-31 137.9 88 79.5
MD12G1257800 Malus domestica HOM05D008013 ORTHO05D010149 3.8e-31 137.9 88 80.7
Dinv02912 Davidia involucrata HOM05D008013 ORTHO05D010149 6.4e-31 137.1 88 76.1
TWI59G0485 Tripterygium wilfordii HOM05D008013 ORTHO05D010149 8.4e-31 136.7 87 77.0
Ciclev10013456m.g Citrus clementina HOM05D008013 ORTHO05D010149 1.4e-30 136.0 87 81.6
MD04G1240900 Malus domestica HOM05D008013 ORTHO05D010149 1.4e-30 136.0 88 79.5
Cc09_g03310 Coffea canephora HOM05D008013 ORTHO05D010149 1.9e-30 135.6 88 77.3
Manes.09G183801 Manihot esculenta HOM05D008013 ORTHO05D010149 1.9e-30 135.6 88 78.4
GSVIVG01019150001 Vitis vinifera HOM05D008013 ORTHO05D010149 1.9e-30 135.6 88 80.7
arahy.Tifrunner.gnm1.ann1.L7M8PN Arachis hypogaea HOM05D008013 ORTHO05D010149 2.5e-30 135.2 77 92.2
Gohir.A08G224100 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.2e-30 134.4 88 79.5
Gohir.D08G244400 Gossypium hirsutum HOM05D008013 ORTHO05D010149 4.2e-30 134.4 88 79.5
THA.LOC104803516 Tarenaya hassleriana HOM05D008013 ORTHO05D010149 4.2e-30 134.4 88 77.3
Rhsim09G0131000 Rhododendron simsii HOM05D008013 ORTHO05D010149 7.1e-30 133.7 89 76.4
RcHm_v2.0_Chr3g0448311 Rosa chinensis HOM05D008013 ORTHO05D010149 1.2e-29 132.9 88 77.3
Nn1g08299 Nelumbo nucifera HOM05D008013 ORTHO05D010149 3.5e-29 131.3 88 73.9
HanXRQChr11g0333671 Helianthus annuus HOM05D008013 ORTHO05D010149 3.0e-28 128.3 88 71.6
CsaV3_5G032690 Cucumis sativus L. HOM05D008013 ORTHO05D010149 5.1e-28 127.5 88 75.0
Atru.chr12.2150 Acer truncatum HOM05D008013 ORTHO05D010149 6.7e-28 127.1 81 81.5
Sed0019978 Sechium edule HOM05D008013 ORTHO05D010149 6.7e-28 127.1 88 72.7
Potri.019G051850 Populus trichocarpa HOM05D008013 ORTHO05D010149 1.1e-27 126.3 79 81.0
Solyc04g150139.1 Solanum lycopersicum HOM05D008013 ORTHO05D010149 4.3e-27 124.4 85 74.1
CAN.G4.29 Capsicum annuum HOM05D008013 ORTHO05D010149 5.6e-27 124.0 85 71.8
Oeu001239.1 Olea europaea HOM05D008013 ORTHO05D010149 9.6e-27 123.2 88 69.3
FAN05G0262 Fragaria x ananassa HOM05D008013 ORTHO05D010149 2.1e-26 122.1 101 65.3
Gorai.004G260700 Gossypium raimondii HOM05D008013 ORTHO05D010149 1.1e-25 119.8 81 77.8
Gohir.D13G159800 Gossypium hirsutum HOM05D008013 ORTHO05D010149 1.8e-25 119.0 81 76.5
Gohir.A13G155000 Gossypium hirsutum HOM05D008013 ORTHO05D010149 9.0e-25 116.7 81 75.3
Migut.F02069 Erythranthe guttata HOM05D008013 ORTHO05D010149 2.0e-24 115.5 88 62.5
Thhalv10026665m.g Eutrema salsugineum HOM05D008013 ORTHO05D010149 2.0e-24 115.5 84 69.0
Sp7g28270 Schrenkiella parvula HOM05D008013 ORTHO05D010149 2.6e-24 115.2 84 67.9
AL7G21760 Arabidopsis lyrata HOM05D008013 ORTHO05D010149 5.8e-24 114.0 84 69.0
Carub.0007s1021 Capsella rubella HOM05D008013 ORTHO05D010149 5.8e-24 114.0 84 66.7
CANSAT54G1767 Cannabis sativa HOM05D000837 ORTHO05D008386 7.6e-24 113.6 81 70.4
Aa31LG2G20150 Aethionema arabicum HOM05D008013 ORTHO05D010149 1.3e-23 112.8 84 66.7
PGR119G0441 Punica granatum HOM05D000837 ORTHO05D008386 1.3e-23 112.8 81 67.9
AT4G30390 Arabidopsis thaliana HOM05D008013 ORTHO05D010149 2.9e-23 111.7 84 65.5
vmacro10397 Vaccinium macrocarpon HOM05D000837 ORTHO05D008386 6.5e-23 110.5 103 62.1
Hund07321 Selenicereus undatus HOM05D008013 ORTHO05D010149 8.4e-23 110.2 80 70.0
EL10Ac4g09411 Beta vulgaris HOM05D008013 ORTHO05D010149 2.5e-22 108.6 83 67.5
A08p19260 Brassica napus HOM05D008013 ORTHO05D010149 5.5e-22 107.5 84 63.1
BraA08t33887Z Brassica rapa HOM05D008013 ORTHO05D010149 5.5e-22 107.5 84 63.1
BcaNung00543 Brassica carinata HOM05D008013 ORTHO05D010149 9.3e-22 106.7 84 61.9
C07p57840 Brassica napus HOM05D008013 ORTHO05D010149 9.3e-22 106.7 84 61.9
BolC7t46244H Brassica oleracea HOM05D008013 ORTHO05D010149 9.3e-22 106.7 84 61.9
Ah.06g195780 Amaranthus hybridus HOM05D008013 ORTHO05D010149 1.2e-21 106.3 87 64.4
A03p59800 Brassica napus HOM05D008013 ORTHO05D010149 1.6e-21 105.9 85 60.0
SHI02464 Sapria himalayana HOM05D008013 ORTHO05D010149 2.7e-21 105.1 79 68.4
unitig_736.g22502 Utricularia gibba HOM05D008013 ORTHO05D010149 2.7e-21 105.1 81 63.0
HanXRQChr05g0156911 Helianthus annuus HOM05D000837 ORTHO05D008386 3.5e-21 104.8 79 67.1
BraA03t15033Z Brassica rapa HOM05D008013 ORTHO05D010149 2.3e-20 102.1 84 59.5
Hund21874 Selenicereus undatus HOM05D008013 ORTHO05D010149 2.5e-19 98.6 69 73.9
ClCG10G008070 Citrullus lanatus HOM05D000837 ORTHO05D008386 3.3e-19 98.2 117 50.4
Sabra19G0056800 Salix brachista HOM05D008013 ORTHO05D010149 5.7e-19 97.4 129 46.5
PSO170G5632 Papaver somniferum HOM05D000837 ORTHO05D008386 2.8e-18 95.1 84 54.8
PSO357G0534 Papaver somniferum HOM05D008013 ORTHO05D010149 2.8e-18 95.1 84 54.8
Pp3c1_15100 Physcomitrium patens HOM05D008013 ORTHO05D010149 1.1e-17 93.2 86 51.2
BcaB03g12645 Brassica carinata HOM05D008013 ORTHO05D010149 4.2e-14 81.3 85 54.1
AagrBONN_evm.TU.Sc2ySwM_228.1824 Anthoceros agrestis HOM05D008013 ORTHO05D010149 1.6e-13 79.3 80 53.8
PGSC0003DMG402023117 Solanum tuberosum HOM05D008013 ORTHO05D010149 2.1e-13 79.0 85 54.1
Sed0019520 Sechium edule HOM05D008013 ORTHO05D010149 7.9e-13 77.0 52 71.2
TAR109G0001 Trochodendron aralioides HOM05D008013 ORTHO05D010149 8.8e-12 73.6 41 82.9
FAN09G3946 Fragaria x ananassa HOM05D000837 ORTHO05D008386 2.2e-10 68.9 50 68.0
CARHR238290 Cardamine hirsuta HOM05D008013 ORTHO05D010149 6.3e-10 67.4 49 63.3
Sc16g0010260 Simmondsia chinensis HOM05D008013 ORTHO05D010149 1.4e-09 66.2 44 70.5
MBI07_g00621_MAGBIO Magnolia biondii HOM05D000837 ORTHO05D008386 6.9e-09 63.9 50 62.0
BcaC01g01153 Brassica carinata HOM05D008013 ORTHO05D010149 1.7e-07 59.3 58 51.7
Eucgr.B01381 Eucalyptus grandis HOM05D008013 ORTHO05D010149 3.2e-06 55.1 80 45.0


User provided reference genes

Program Settings