Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0002015 Lotus japonicus HOM05D007522 ORTHO05D009518 5.3e-207 724.2 379 100.0
Glyma.06G072500 Glycine max HOM05D007522 ORTHO05D009518 5.8e-137 491.5 379 71.0
Phvul.009G097000 Phaseolus vulgaris HOM05D007522 ORTHO05D009518 6.9e-130 468.0 380 66.8
Ca_15704_v3 Cicer arietinum L. HOM05D000186 ORTHO05D001124 9.0e-130 467.6 391 67.3
TPR.G34679 Trifolium pratense HOM05D007522 ORTHO05D009518 1.1e-127 460.7 378 67.2
arahy.Tifrunner.gnm1.ann1.J4BCXN Arachis hypogaea HOM05D007522 ORTHO05D009518 5.3e-122 441.8 391 63.2
Lalb_Chr08g0243841 Lupinus albus HOM05D007522 ORTHO05D009518 9.9e-121 437.6 387 63.0
VMungo1309G1471 Vigna mungo HOM05D007522 ORTHO05D009518 8.2e-107 391.3 314 68.5
Medtr3g108530 Medicago truncatula HOM05D007522 ORTHO05D009518 1.8e-98 363.6 259 75.7
Psat0s1782g0120 Pisum sativum HOM05D007522 ORTHO05D009518 6.9e-98 361.7 329 61.7
QL12p031480 Quercus lobata HOM05D007522 ORTHO05D009518 4.7e-86 322.4 390 51.5
arahy.Tifrunner.gnm1.ann1.EE81AI Arachis hypogaea HOM05D007522 ORTHO05D009518 9.7e-84 314.7 216 76.4
CiPaw.07G218500 Carya illinoinensis HOM05D007522 ORTHO05D009518 1.0e-80 304.7 376 49.7
TAR383G0977 Trochodendron aralioides HOM05D007522 ORTHO05D009518 5.0e-80 302.4 403 46.4
COL.COLO4_24044 Corchorus olitorius HOM05D007522 ORTHO05D009518 1.8e-74 283.9 261 60.5
Gohir.A13G204200 Gossypium hirsutum HOM05D007522 ORTHO05D009518 5.9e-73 278.9 257 60.3
Potri.006G247900 Populus trichocarpa HOM05D007522 ORTHO05D009518 5.9e-73 278.9 270 57.8
Gohir.D13G209500 Gossypium hirsutum HOM05D007522 ORTHO05D009518 7.7e-73 278.5 257 60.3
Gorai.013G238600 Gossypium raimondii HOM05D007522 ORTHO05D009518 7.7e-73 278.5 257 60.3
FvH4_2g30000 Fragaria vesca HOM05D007522 ORTHO05D009518 1.3e-72 277.7 257 60.3
RcHm_v2.0_Chr6g0312911 Rosa chinensis HOM05D007522 ORTHO05D009518 2.9e-72 276.6 257 59.9
FAN15G2839 Fragaria x ananassa HOM05D007522 ORTHO05D009518 6.5e-72 275.4 257 59.9
Sabra06G0193900 Salix brachista HOM05D007522 ORTHO05D009518 3.2e-71 273.1 257 58.8
FAN24G0147 Fragaria x ananassa HOM05D007522 ORTHO05D009518 5.5e-71 272.3 251 61.0
Manes.03G065616 Manihot esculenta HOM05D007522 ORTHO05D009518 5.2e-69 265.8 284 54.9
GSVIVG01035795001 Vitis vinifera HOM05D007522 ORTHO05D009518 6.8e-69 265.4 268 53.4
Prupe.1G467900 Prunus persica HOM05D007522 ORTHO05D009518 1.5e-68 264.2 254 59.1
MD15G1116400 Malus domestica HOM05D007522 ORTHO05D009518 4.4e-68 262.7 254 57.5
CSS0007980 Camellia sinensis var. sinensis HOM05D007522 ORTHO05D009518 1.4e-66 257.7 284 52.1
PGR044G0714 Punica granatum HOM05D007522 ORTHO05D009518 1.6e-65 254.2 261 53.3
Duzib187G1360 Durio zibethinus HOM05D007522 ORTHO05D009518 4.5e-65 252.7 208 65.4
Aqoxy2G01954 Aquilegia oxysepala HOM05D007522 ORTHO05D009518 9.5e-63 245.0 380 43.2
Ciclev10009234m.g Citrus clementina HOM05D007522 ORTHO05D009518 1.6e-62 244.2 240 58.3
Sed0015375 Sechium edule HOM05D007522 ORTHO05D009518 4.7e-62 242.7 274 49.6
FAN27G1610 Fragaria x ananassa HOM05D007522 ORTHO05D009518 1.0e-61 241.5 224 61.2
CARHR240530 Cardamine hirsuta HOM05D007522 ORTHO05D009518 4.0e-61 239.6 257 52.5
Nn8g39310 Nelumbo nucifera HOM05D007522 ORTHO05D009518 4.0e-61 239.6 404 38.9
Thecc.09G145600 Theobroma cacao HOM05D007522 ORTHO05D009518 4.0e-61 239.6 242 57.0
Carub.0007s0799 Capsella rubella HOM05D007522 ORTHO05D009518 6.8e-61 238.8 277 49.1
Actinidia13430 Actinidia chinensis HOM05D007522 ORTHO05D009518 1.2e-60 238.0 249 53.8
THA.LOC104819887 Tarenaya hassleriana HOM05D007522 ORTHO05D009518 2.6e-60 236.9 314 44.6
AL7G19200 Arabidopsis lyrata HOM05D007522 ORTHO05D009518 3.4e-60 236.5 261 51.0
Oeu014660.1 Olea europaea HOM05D007522 ORTHO05D009518 5.7e-60 235.7 267 50.6
Aa31LG4G11730 Aethionema arabicum HOM05D007522 ORTHO05D009518 2.2e-59 233.8 277 49.1
Thhalv10025779m.g Eutrema salsugineum HOM05D007522 ORTHO05D009518 6.3e-59 232.3 257 51.0
AT4G32560 Arabidopsis thaliana HOM05D007522 ORTHO05D009518 1.1e-58 231.5 261 49.4
BcaC09g52047 Brassica carinata HOM05D007522 ORTHO05D009518 1.4e-58 231.1 274 50.4
BolC1t00636H Brassica oleracea HOM05D007522 ORTHO05D009518 4.1e-58 229.6 276 50.0
C01p06400 Brassica napus HOM05D007522 ORTHO05D009518 7.0e-58 228.8 276 50.0
Sp7g30340 Schrenkiella parvula HOM05D007522 ORTHO05D009518 1.2e-57 228.0 257 51.0
A01p05830 Brassica napus HOM05D007522 ORTHO05D009518 1.6e-57 227.6 274 50.7
BraA01t00551Z Brassica rapa HOM05D007522 ORTHO05D009518 7.8e-57 225.3 274 50.0
MELO3C011219.2 Cucumis melo HOM05D007522 ORTHO05D009518 3.8e-56 223.0 269 48.7
Eucgr.C02839 Eucalyptus grandis HOM05D007522 ORTHO05D009518 3.8e-56 223.0 245 51.8
Eucgr.C02850 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.6e-56 222.2 246 50.8
HanXRQChr13g0402121 Helianthus annuus HOM05D007522 ORTHO05D009518 1.1e-55 221.5 253 49.0
Cpa.g.sc91.26 Carica papaya HOM05D007522 ORTHO05D009518 7.3e-55 218.8 384 39.8
EL10Ac2g02553 Beta vulgaris HOM05D007522 ORTHO05D009518 9.5e-55 218.4 367 39.0
Eucgr.C02854 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.8e-54 216.9 278 46.8
CsaV3_2G031690 Cucumis sativus L. HOM05D007522 ORTHO05D009518 1.0e-53 214.9 249 49.4
Migut.A00284 Erythranthe guttata HOM05D007522 ORTHO05D009518 1.5e-52 211.1 248 48.4
MSTRG.25867 Avicennia marina HOM05D007522 ORTHO05D009518 2.0e-52 210.7 249 48.2
Eucgr.L02345 Eucalyptus grandis HOM05D007522 ORTHO05D009518 2.6e-52 210.3 273 46.5
Atru.chr7.2341 Acer truncatum HOM05D007522 ORTHO05D009518 5.8e-52 209.1 191 60.2
Peaxi162Scf00267g00097 Petunia axillaris HOM05D007522 ORTHO05D009518 7.5e-52 208.8 255 48.2
Cc11_g01290 Coffea canephora HOM05D007522 ORTHO05D009518 1.4e-50 204.5 218 53.2
CANSAT11G2673 Cannabis sativa HOM05D007522 ORTHO05D009518 5.4e-50 202.6 188 60.1
Haze_21613 Corylus avellana HOM05D007522 ORTHO05D009518 9.2e-50 201.8 354 39.5
ATR0083G062 Amborella trichopoda HOM05D007522 ORTHO05D009518 1.2e-49 201.4 261 42.9
PSO782G1743 Papaver somniferum HOM05D007522 ORTHO05D009518 1.2e-49 201.4 286 44.4
Rhsim02G0189000 Rhododendron simsii HOM05D007522 ORTHO05D009518 1.0e-48 198.4 214 52.3
Solyc06g011403.1 Solanum lycopersicum HOM05D007522 ORTHO05D009518 3.9e-48 196.4 243 46.9
Sopen06g006080 Solanum pennellii HOM05D007522 ORTHO05D009518 3.9e-48 196.4 243 47.3
ECA233G0736 Erigeron canadensis HOM05D007522 ORTHO05D009518 6.6e-48 195.7 249 47.0
PSO063G3677 Papaver somniferum HOM05D007522 ORTHO05D009518 1.1e-47 194.9 281 45.2
Lsat_1_v5_gn_6_22860 Lactuca sativa HOM05D007522 ORTHO05D009518 6.2e-46 189.1 250 46.0
Eucgr.C02843 Eucalyptus grandis HOM05D007522 ORTHO05D009518 6.8e-45 185.7 214 50.9
Dinv30202 Davidia involucrata HOM05D007522 ORTHO05D009518 1.9e-42 177.6 193 52.3
Pp3c10_19840 Physcomitrium patens HOM05D007522 ORTHO05D009518 6.0e-41 172.6 478 29.9
vmacro11126 Vaccinium macrocarpon HOM05D007522 ORTHO05D009518 5.1e-40 169.5 339 37.5
AUR62032367 Chenopodium quinoa HOM05D007522 ORTHO05D009518 3.3e-39 166.8 209 47.4
Mapoly0015s0053 Marchantia polymorpha HOM05D007522 ORTHO05D009518 7.3e-39 165.6 511 27.6
AagrBONN_evm.TU.Sc2ySwM_117.2977 Anthoceros agrestis HOM05D007522 ORTHO05D009518 1.8e-37 161.0 259 38.2
Glyma.04G070700 Glycine max HOM05D007522 ORTHO05D009518 5.8e-36 156.0 136 61.8
HPP92_008699 Vanilla planifolia HOM05D002348 ORTHO05D002512 3.9e-32 143.3 325 33.5
SalBow8G3415 Salvia bowleyana HOM05D007522 ORTHO05D009518 4.3e-31 139.8 107 65.4
CDE02G2364 Ceratophyllum demersum HOM05D007522 ORTHO05D009518 4.7e-30 136.3 264 36.4
AUR62024852 Chenopodium quinoa HOM05D007522 ORTHO05D009518 7.6e-28 129.0 259 37.8
Ah.10g025820 Amaranthus hybridus HOM05D007522 ORTHO05D009518 1.3e-27 128.3 148 50.7
MD08G1138500 Malus domestica HOM05D007522 ORTHO05D009518 6.6e-24 115.9 89 64.0
CBR_g51241 Chara braunii HOM05D007522 ORTHO05D009518 1.8e-21 107.8 274 27.4
VMungo1309G0092 Vigna mungo HOM05D007522 ORTHO05D009518 5.3e-21 106.3 115 45.2
Cfa021487 Carpinus fangiana HOM05D000146 ORTHO05D007947 9.9e-20 102.1 265 31.7
MD08G1138600 Malus domestica HOM05D007522 ORTHO05D009518 7.1e-18 95.9 128 45.3
CBR_g75925 Chara braunii HOM05D007522 ORTHO05D009518 5.1e-16 89.7 130 36.2
Glyma.04G070800 Glycine max HOM05D007522 ORTHO05D009518 1.3e-14 85.1 52 82.7
Cfa021321 Carpinus fangiana HOM05D007522 ORTHO05D009518 5.3e-13 79.7 95 50.5
Hund03006 Selenicereus undatus HOM05D007522 ORTHO05D009518 8.7e-08 62.4 184 31.0
SMO329G0073 Selaginella moellendorffii HOM05D007522 ORTHO05D009518 3.3e-07 60.5 102 35.3
SEGI_07807 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 4.8e-06 56.6 65 44.6
SEGI_10687 Sequoiadendron giganteum HOM05D007522 ORTHO05D009518 8.1e-06 55.8 104 33.7


User provided reference genes

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