Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1g0001463 Lotus japonicus HOM05D007384 ORTHO05D008511 3.2e-78 295.0 153 100.0
Lalb_Chr11g0068051 Lupinus albus HOM05D007384 ORTHO05D008511 4.1e-25 118.6 164 50.6
Medtr3g094800 Medicago truncatula HOM05D007384 ORTHO05D008511 1.6e-24 116.7 155 51.6
Glyma.06G146100 Glycine max HOM05D007384 ORTHO05D008511 7.5e-19 97.8 164 46.3
arahy.Tifrunner.gnm1.ann1.P053PK Arachis hypogaea HOM05D007384 ORTHO05D008511 1.1e-17 94.0 166 42.2
arahy.Tifrunner.gnm1.ann1.66AXK3 Arachis hypogaea HOM05D007384 ORTHO05D008511 1.9e-17 93.2 165 40.6
arahy.Tifrunner.gnm1.ann1.3HN607 Arachis hypogaea HOM05D007384 ORTHO05D008511 3.2e-17 92.4 165 40.0
Glyma.08G141200 Glycine max HOM05D007384 ORTHO05D008511 5.4e-17 91.7 156 39.7
VMungo0251G1085 Vigna mungo HOM05D007384 ORTHO05D008511 2.1e-16 89.7 156 40.4
Phvul.009G139900 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 2.7e-16 89.4 160 46.2
Sabra05G0069000 Salix brachista HOM05D007384 ORTHO05D008511 2.3e-15 86.3 159 37.1
Psat5g065520 Pisum sativum HOM05D007384 ORTHO05D008511 1.1e-14 84.0 171 40.4
Glyma.05G183400 Glycine max HOM05D007384 ORTHO05D008511 3.3e-14 82.4 150 36.0
TWI77G0698 Tripterygium wilfordii HOM05D007384 ORTHO05D008511 3.3e-14 82.4 154 37.0
Dinv19495 Davidia involucrata HOM05D007384 ORTHO05D008511 3.6e-13 79.0 171 34.5
Dinv42700 Davidia involucrata HOM05D007384 ORTHO05D008511 6.2e-13 78.2 160 36.2
VMungo1309G0400 Vigna mungo HOM05D007384 ORTHO05D008511 6.2e-13 78.2 162 43.2
Potri.005G083900 Populus trichocarpa HOM05D007384 ORTHO05D008511 1.4e-12 77.0 151 35.8
TPR.G40723 Trifolium pratense HOM05D007384 ORTHO05D008511 2.3e-12 76.3 140 43.6
SalBow5G0260 Salvia bowleyana HOM05D007384 ORTHO05D008511 6.8e-12 74.7 151 36.4
Glyma.04G219700 Glycine max HOM05D007384 ORTHO05D008511 8.9e-12 74.3 102 49.0
Lj4g0022190 Lotus japonicus HOM05D007384 ORTHO05D008511 1.5e-11 73.6 168 37.5
Lj4g0025402 Lotus japonicus HOM05D007384 ORTHO05D008511 1.5e-11 73.6 168 37.5
Thecc.01G112100 Theobroma cacao HOM05D007384 ORTHO05D008511 1.5e-11 73.6 158 34.8
Duzib187G0804 Durio zibethinus HOM05D007384 ORTHO05D008511 2.0e-11 73.2 142 36.6
SalBow5G4202 Salvia bowleyana HOM05D007384 ORTHO05D008511 2.0e-11 73.2 149 36.2
MSTRG.23314 Avicennia marina HOM05D007384 ORTHO05D008511 3.4e-11 72.4 155 33.5
FAN19G0612 Fragaria x ananassa HOM05D007384 ORTHO05D008511 9.9e-11 70.9 160 35.6
RcHm_v2.0_Chr2g0116341 Rosa chinensis HOM05D007384 ORTHO05D008511 1.3e-10 70.5 156 32.7
FAN23G2853 Fragaria x ananassa HOM05D007384 ORTHO05D008511 1.7e-10 70.1 156 34.6
FvH4_1g22200 Fragaria vesca HOM05D007384 ORTHO05D008511 2.2e-10 69.7 160 35.0
Lalb_Chr07g0184821 Lupinus albus HOM05D007384 ORTHO05D008511 2.2e-10 69.7 156 35.3
Peaxi162Scf00323g00037 Petunia axillaris HOM05D007384 ORTHO05D008511 2.2e-10 69.7 159 36.5
FAN26G2489 Fragaria x ananassa HOM05D007384 ORTHO05D008511 2.9e-10 69.3 156 34.0
Lsat_1_v5_gn_2_65360 Lactuca sativa HOM05D007384 ORTHO05D008511 1.1e-09 67.4 163 31.3
Duzib187G1860 Durio zibethinus HOM05D007384 ORTHO05D008511 1.4e-09 67.0 152 33.6
Potri.007G081700 Populus trichocarpa HOM05D007384 ORTHO05D008511 7.1e-09 64.7 147 33.3
Sed0027168 Sechium edule HOM05D007384 ORTHO05D008511 7.1e-09 64.7 158 33.5
Prupe.6G173600 Prunus persica HOM05D007384 ORTHO05D008511 1.2e-08 63.9 159 31.4
Oeu056489.1 Olea europaea HOM05D007384 ORTHO05D008511 2.1e-08 63.2 159 35.2
Phvul.002G264500 Phaseolus vulgaris HOM05D007384 ORTHO05D008511 3.5e-08 62.4 156 35.3
PGSC0003DMG400012958 Solanum tuberosum HOM05D007384 ORTHO05D008511 4.6e-08 62.0 160 34.4
CiPaw.03G134700 Carya illinoinensis HOM05D007384 ORTHO05D008511 6.0e-08 61.6 157 31.8
Oeu056487.1 Olea europaea HOM05D007384 ORTHO05D008511 6.0e-08 61.6 160 33.8
CARHR278890 Cardamine hirsuta HOM05D012887 ORTHO05D008511 1.0e-07 60.8 162 33.3
Oeu028376.1 Olea europaea HOM05D007384 ORTHO05D008511 1.7e-07 60.1 164 32.3
Oeu028378.1 Olea europaea HOM05D007384 ORTHO05D008511 1.7e-07 60.1 164 32.3
Cc07_g16090 Coffea canephora HOM05D007384 ORTHO05D008511 3.0e-07 59.3 161 32.3
CiPaw.04G092400 Carya illinoinensis HOM05D007384 ORTHO05D008511 3.9e-07 58.9 162 31.5
Lalb_Chr12g0203551 Lupinus albus HOM05D007384 ORTHO05D008511 3.9e-07 58.9 151 35.8
arahy.Tifrunner.gnm1.ann1.XNBA0B Arachis hypogaea HOM05D007384 ORTHO05D008511 5.1e-07 58.5 79 51.9
Manes.13G077680 Manihot esculenta HOM05D007384 ORTHO05D008511 5.1e-07 58.5 156 33.3
THA.LOC104799256 Tarenaya hassleriana HOM05D012887 ORTHO05D008511 5.1e-07 58.5 158 31.6
Gohir.A10G086700 Gossypium hirsutum HOM05D007384 ORTHO05D008511 8.6e-07 57.8 161 32.3
HanXRQChr10g0295241 Helianthus annuus HOM05D007384 ORTHO05D008511 8.6e-07 57.8 137 31.4
Solyc04g053145.1 Solanum lycopersicum HOM05D007384 ORTHO05D008511 1.1e-06 57.4 146 34.2
MD01G1019000 Malus domestica HOM05D007384 ORTHO05D008511 2.5e-06 56.2 154 31.8
Rhsim10G0013800 Rhododendron simsii HOM05D007384 ORTHO05D008511 3.3e-06 55.8 144 31.2
Atru.chr4.403 Acer truncatum HOM05D007384 ORTHO05D008511 4.3e-06 55.5 155 29.0
Nn5g28918 Nelumbo nucifera HOM05D007384 ORTHO05D008511 5.6e-06 55.1 169 26.0
Hund03542 Selenicereus undatus HOM05D007384 ORTHO05D008511 5.6e-06 55.1 167 33.5
Gorai.011G111700 Gossypium raimondii HOM05D007384 ORTHO05D008511 9.6e-06 54.3 164 31.1


User provided reference genes

Program Settings