Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P937T48 Lonicera japonica HOM05D005580 ORTHO05D006395 3.3e-77 291.6 142 100.0
Rhsim03G0130700 Rhododendron simsii HOM05D005580 ORTHO05D006395 6.9e-67 257.3 142 85.9
CSS0041204 Camellia sinensis var. sinensis HOM05D005580 ORTHO05D006395 3.4e-66 255.0 142 85.2
Thecc.10G042400 Theobroma cacao HOM05D005580 ORTHO05D006395 7.6e-66 253.8 142 84.5
GSVIVG01016552001 Vitis vinifera HOM05D005580 ORTHO05D006395 1.0e-65 253.4 142 85.2
Eucgr.G02934 Eucalyptus grandis HOM05D005580 ORTHO05D006395 1.3e-65 253.1 142 83.8
Cfa001474 Carpinus fangiana HOM05D005580 ORTHO05D006395 2.9e-65 251.9 142 83.8
Cc02_g07860 Coffea canephora HOM05D005580 ORTHO05D006395 4.9e-65 251.1 142 84.5
HanXRQChr14g0457951 Helianthus annuus HOM05D005580 ORTHO05D006395 1.1e-64 250.0 142 84.5
Nn2g11101 Nelumbo nucifera HOM05D005580 ORTHO05D006395 1.4e-64 249.6 142 81.7
Duzib128G0371 Durio zibethinus HOM05D005580 ORTHO05D006395 1.9e-64 249.2 142 82.4
Oeu064380.1 Olea europaea HOM05D005580 ORTHO05D006395 1.9e-64 249.2 142 81.7
Cpa.g.sc1.404 Carica papaya HOM05D005580 ORTHO05D006395 2.5e-64 248.8 145 84.1
Duzib106G1822 Durio zibethinus HOM05D005580 ORTHO05D006395 2.5e-64 248.8 142 83.1
Manes.10G030300 Manihot esculenta HOM05D005580 ORTHO05D006395 3.2e-64 248.4 142 83.1
DCAR_011695 Daucus carota HOM05D005580 ORTHO05D006395 4.2e-64 248.1 145 83.4
TAR623G0785 Trochodendron aralioides HOM05D005580 ORTHO05D006395 4.2e-64 248.1 142 81.7
TAR633G1881 Trochodendron aralioides HOM05D005580 ORTHO05D006395 7.1e-64 247.3 142 81.0
Nn2g13341 Nelumbo nucifera HOM05D005580 ORTHO05D006395 1.2e-63 246.5 142 81.7
COL.COLO4_15040 Corchorus olitorius HOM05D005580 ORTHO05D006395 1.6e-63 246.1 142 81.7
Potri.010G203900 Populus trichocarpa HOM05D005580 ORTHO05D006395 1.6e-63 246.1 143 83.9
Atru.chr12.452 Acer truncatum HOM05D005580 ORTHO05D006395 4.6e-63 244.6 146 82.9
Atru.chr12.474 Acer truncatum HOM05D005580 ORTHO05D006395 4.6e-63 244.6 146 82.9
Manes.07G116200 Manihot esculenta HOM05D005580 ORTHO05D006395 4.6e-63 244.6 142 81.7
vmacro07170 Vaccinium macrocarpon HOM05D005580 ORTHO05D006395 4.6e-63 244.6 136 84.6
Potri.008G055800 Populus trichocarpa HOM05D005580 ORTHO05D006395 6.0e-63 244.2 143 83.2
TWI38G1118 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 6.0e-63 244.2 142 82.4
CiPaw.01G287400 Carya illinoinensis HOM05D005580 ORTHO05D006395 7.9e-63 243.8 142 82.4
QL08p059794 Quercus lobata HOM05D005580 ORTHO05D006395 1.8e-62 242.7 143 81.1
Gorai.013G022300 Gossypium raimondii HOM05D005580 ORTHO05D006395 3.0e-62 241.9 142 81.0
DCAR_027619 Daucus carota HOM05D005580 ORTHO05D006395 3.9e-62 241.5 142 80.3
FvH4_7g22470 Fragaria vesca HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
FAN01G0694 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
FAN01G2215 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
FAN03G1496 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
FAN06G0736 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
FAN06G1328 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
FAN10G2347 Fragaria x ananassa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 143 81.8
Gohir.D13G019900 Gossypium hirsutum HOM05D005580 ORTHO05D006395 3.9e-62 241.5 142 80.3
Lsat_1_v5_gn_2_119121 Lactuca sativa HOM05D005580 ORTHO05D006395 3.9e-62 241.5 150 78.7
RcHm_v2.0_Chr1g0367081 Rosa chinensis HOM05D005580 ORTHO05D006395 6.7e-62 240.7 143 81.8
Gohir.A13G019300 Gossypium hirsutum HOM05D005580 ORTHO05D006395 8.7e-62 240.4 142 80.3
Sabra08G0040500 Salix brachista HOM05D005580 ORTHO05D006395 2.5e-61 238.8 143 81.8
CANSAT56G2481 Cannabis sativa HOM05D005580 ORTHO05D006395 4.3e-61 238.0 145 80.0
MD01G1134100 Malus domestica HOM05D005580 ORTHO05D006395 4.3e-61 238.0 144 81.2
Nitab4.5_0001097g0030 Nicotiana tabacum HOM05D005580 ORTHO05D006395 4.3e-61 238.0 145 80.7
Gohir.A10G218800 Gossypium hirsutum HOM05D005580 ORTHO05D006395 5.7e-61 237.7 142 79.6
Gohir.D10G228400 Gossypium hirsutum HOM05D005580 ORTHO05D006395 5.7e-61 237.7 142 79.6
Gorai.011G260800 Gossypium raimondii HOM05D005580 ORTHO05D006395 5.7e-61 237.7 142 79.6
Nitab4.5_0013062g0010 Nicotiana tabacum HOM05D005580 ORTHO05D006395 5.7e-61 237.7 145 80.0
HanXRQChr02g0037481 Helianthus annuus HOM05D005580 ORTHO05D006395 7.4e-61 237.3 142 78.2
Prupe.2G235300 Prunus persica HOM05D005580 ORTHO05D006395 7.4e-61 237.3 144 80.6
SalBow6G2402 Salvia bowleyana HOM05D005580 ORTHO05D006395 7.4e-61 237.3 142 78.2
CANSAT56G4483 Cannabis sativa HOM05D005580 ORTHO05D006395 9.7e-61 236.9 145 79.3
TWI63G0967 Tripterygium wilfordii HOM05D005580 ORTHO05D006395 1.3e-60 236.5 142 81.7
CiPaw.02G183900 Carya illinoinensis HOM05D005580 ORTHO05D006395 1.6e-60 236.1 140 78.6
Lj8C84T10 Lonicera japonica HOM05D005580 ORTHO05D006395 1.6e-60 236.1 142 74.6
ECA238G1104 Erigeron canadensis HOM05D005580 ORTHO05D006395 2.8e-60 235.3 148 77.7
VMungo1383G1027 Vigna mungo HOM05D005580 ORTHO05D006395 2.8e-60 235.3 145 77.9
Lsat_1_v5_gn_8_15580 Lactuca sativa HOM05D005580 ORTHO05D006395 3.7e-60 235.0 142 78.9
PGSC0003DMG400023532 Solanum tuberosum HOM05D005580 ORTHO05D006395 4.8e-60 234.6 137 79.6
ClCG09G019730 Citrullus lanatus HOM05D005580 ORTHO05D006395 6.3e-60 234.2 143 79.0
Glyma.18G291400 Glycine max HOM05D005580 ORTHO05D006395 8.2e-60 233.8 147 76.2
MELO3C021630.2 Cucumis melo HOM05D005580 ORTHO05D006395 1.4e-59 233.0 143 78.3
CsaV3_5G026670 Cucumis sativus L. HOM05D005580 ORTHO05D006395 1.4e-59 233.0 143 78.3
Glyma.02G091600 Glycine max HOM05D005580 ORTHO05D006395 1.4e-59 233.0 145 76.6
Sed0020308 Sechium edule HOM05D005580 ORTHO05D006395 1.4e-59 233.0 143 79.0
MSTRG.8252 Avicennia marina HOM05D005580 ORTHO05D006395 3.1e-59 231.9 142 78.2
MD07G1198300 Malus domestica HOM05D005580 ORTHO05D006395 3.1e-59 231.9 144 79.2
Peaxi162Scf00886g00003 Petunia axillaris HOM05D005580 ORTHO05D006395 4.1e-59 231.5 147 77.6
Sabra10G0157500 Salix brachista HOM05D005580 ORTHO05D006395 5.3e-59 231.1 143 79.0
Phvul.008G010700 Phaseolus vulgaris HOM05D005580 ORTHO05D006395 9.0e-59 230.3 134 79.9
Solyc05g054450.1 Solanum lycopersicum HOM05D005580 ORTHO05D006395 1.2e-58 229.9 133 80.5
Sopen05g032940 Solanum pennellii HOM05D005580 ORTHO05D006395 1.2e-58 229.9 133 80.5
unitig_8.g3317 Utricularia gibba HOM05D005580 ORTHO05D006395 1.2e-58 229.9 142 76.1
Sed0002022 Sechium edule HOM05D005580 ORTHO05D006395 1.5e-58 229.6 143 76.9
Os05g0459300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 2.6e-58 228.8 142 78.2
Lj1g0024567 Lotus japonicus HOM05D005580 ORTHO05D006395 3.4e-58 228.4 143 77.6
Lalb_Chr17g0336141 Lupinus albus HOM05D005580 ORTHO05D006395 5.9e-58 227.6 144 75.7
MBI05_g22035_MAGBIO Magnolia biondii HOM05D005580 ORTHO05D006395 5.9e-58 227.6 142 76.1
THA.LOC104810028 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 1.0e-57 226.9 145 75.2
HPP92_019446 Vanilla planifolia HOM05D005580 ORTHO05D006395 1.7e-57 226.1 142 73.2
TPR.G23775 Trifolium pratense HOM05D005580 ORTHO05D006395 1.9e-56 222.6 146 73.3
Medtr7g026320 Medicago truncatula HOM05D005580 ORTHO05D006395 4.2e-56 221.5 145 73.1
PSO339G6083 Papaver somniferum HOM05D005580 ORTHO05D006395 1.2e-55 219.9 142 76.8
Sc10g0001550 Simmondsia chinensis HOM05D005580 ORTHO05D006395 2.1e-55 219.2 143 76.9
PSO339G4490 Papaver somniferum HOM05D005580 ORTHO05D006395 2.7e-55 218.8 143 74.1
PSO384G2205 Papaver somniferum HOM05D005580 ORTHO05D006395 2.7e-55 218.8 143 74.1
Ca_26455_v3 Cicer arietinum L. HOM05D005580 ORTHO05D006395 3.6e-55 218.4 144 71.5
PSO151G0057 Papaver somniferum HOM05D005580 ORTHO05D006395 4.6e-55 218.0 142 76.1
Actinidia02948 Actinidia chinensis HOM05D005580 ORTHO05D006395 3.9e-54 214.9 144 74.3
Thhalv10010708m.g Eutrema salsugineum HOM05D005580 ORTHO05D006395 3.9e-54 214.9 148 70.9
AL5G36570 Arabidopsis lyrata HOM05D005580 ORTHO05D006395 1.1e-53 213.4 148 70.9
Psat3g161760 Pisum sativum HOM05D005580 ORTHO05D006395 1.5e-53 213.0 149 69.1
PGR142G3643 Punica granatum HOM05D005580 ORTHO05D006395 1.5e-53 213.0 138 75.4
Sp5g07050 Schrenkiella parvula HOM05D005580 ORTHO05D006395 2.5e-53 212.2 148 70.9
AT3G55420 Arabidopsis thaliana HOM05D005580 ORTHO05D006395 4.3e-53 211.5 148 70.3
SEGI_33908 Sequoiadendron giganteum HOM05D005580 ORTHO05D006395 4.3e-53 211.5 142 70.4
ATR0559G355 Amborella trichopoda HOM05D005580 ORTHO05D006395 1.3e-52 209.9 144 69.4
ClCG07G003270 Citrullus lanatus HOM05D005580 ORTHO05D006395 1.3e-52 209.9 153 66.0
THA.LOC104824274 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 1.6e-52 209.5 133 72.9
A09p48340 Brassica napus HOM05D005580 ORTHO05D006395 2.2e-52 209.1 148 70.3
BraA09t40286Z Brassica rapa HOM05D005580 ORTHO05D006395 2.2e-52 209.1 148 70.3
Aa31LG10G10450 Aethionema arabicum HOM05D005580 ORTHO05D006395 6.3e-52 207.6 137 74.5
BcaC02g09755 Brassica carinata HOM05D005580 ORTHO05D006395 6.3e-52 207.6 148 69.6
C04p36960 Brassica napus HOM05D005580 ORTHO05D006395 6.3e-52 207.6 148 69.6
BolC4t25261H Brassica oleracea HOM05D005580 ORTHO05D006395 6.3e-52 207.6 148 69.6
BcaC07g39844 Brassica carinata HOM05D005580 ORTHO05D006395 8.2e-52 207.2 148 68.9
Carub.0005s2214 Capsella rubella HOM05D005580 ORTHO05D006395 8.2e-52 207.2 149 69.8
CsaV3_5G008020 Cucumis sativus L. HOM05D005580 ORTHO05D006395 8.2e-52 207.2 150 66.7
MELO3C023848.2 Cucumis melo HOM05D005580 ORTHO05D006395 1.1e-51 206.8 149 67.1
C08p30460 Brassica napus HOM05D005580 ORTHO05D006395 1.4e-51 206.5 148 68.9
BolC8t50680H Brassica oleracea HOM05D005580 ORTHO05D006395 1.4e-51 206.5 148 68.9
A04p04530 Brassica napus HOM05D005580 ORTHO05D006395 2.4e-51 205.7 148 68.9
BraA04t16163Z Brassica rapa HOM05D005580 ORTHO05D006395 2.4e-51 205.7 148 68.9
Sed0012553 Sechium edule HOM05D005580 ORTHO05D006395 2.4e-51 205.7 149 66.4
C08p30630 Brassica napus HOM05D005580 ORTHO05D006395 5.3e-51 204.5 148 68.2
THA.LOC104807715 Tarenaya hassleriana HOM05D005580 ORTHO05D006395 1.2e-50 203.4 145 68.3
BcaB01g00102 Brassica carinata HOM05D005580 ORTHO05D006395 2.0e-50 202.6 149 67.8
Lalb_Chr10g0091641 Lupinus albus HOM05D005580 ORTHO05D006395 4.5e-50 201.4 131 72.5
Ciclev10032947m.g Citrus clementina HOM05D005580 ORTHO05D006395 5.9e-50 201.1 120 82.5
SGA_v2.0_scaffold2G01004 Striga asiatica HOM05D005580 ORTHO05D006395 1.0e-49 200.3 120 76.7
Ah.16g102300 Amaranthus hybridus HOM05D005580 ORTHO05D006395 1.3e-49 199.9 134 70.9
AUR62012083 Chenopodium quinoa HOM05D005580 ORTHO05D006395 1.3e-49 199.9 135 70.4
AUR62039380 Chenopodium quinoa HOM05D000020 ORTHO05D001617 2.9e-49 198.7 135 70.4
Dinv26015 Davidia involucrata HOM05D005580 ORTHO05D006395 8.5e-49 197.2 125 73.6
CDE02G1824 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 1.2e-47 193.4 135 68.1
Os12g0571300 Oryza sativa ssp. japonica HOM05D005580 ORTHO05D006395 3.0e-46 188.7 151 60.9
SGA_v2.0_scaffold221G42666 Striga asiatica HOM05D005580 ORTHO05D006395 4.4e-45 184.9 108 77.8
BcaC07g39859 Brassica carinata HOM05D005580 ORTHO05D006395 4.5e-42 174.9 142 61.3
Migut.F01495 Erythranthe guttata HOM05D005580 ORTHO05D006395 1.7e-41 172.9 101 80.2
Oeu048246.1 Olea europaea HOM05D005580 ORTHO05D006395 6.5e-41 171.0 104 77.9
CARHR165440 Cardamine hirsuta HOM05D005580 ORTHO05D006395 1.0e-38 163.7 108 72.2
BcaB02g08423 Brassica carinata HOM05D005580 ORTHO05D006395 3.3e-37 158.7 108 72.2
Dinv03047 Davidia involucrata HOM05D005580 ORTHO05D006395 1.3e-36 156.8 142 62.0
Cc05_g01760 Coffea canephora HOM05D005580 ORTHO05D006395 5.0e-33 144.8 104 68.3
CDE08G0377 Ceratophyllum demersum HOM05D005580 ORTHO05D006395 6.5e-25 117.9 142 47.2
Aqoxy4G02929 Aquilegia oxysepala HOM05D005580 ORTHO05D006395 1.2e-23 113.6 60 86.7
SEGI_21732 Sequoiadendron giganteum HOM05D003049 ORTHO05D003531 4.5e-18 95.1 62 74.2
arahy.Tifrunner.gnm1.ann1.HEV3CF Arachis hypogaea HOM05D000969 ORTHO05D011765 2.9e-17 92.4 60 70.0


User provided reference genes

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