Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 2.8e-76 288.5 141 100.0
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-65 252.7 137 92.0
Lj2P438T31 Lonicera japonica HOM05D008126 ORTHO05D000309 4.2e-64 248.1 139 88.5
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-57 226.5 136 84.6
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-56 223.4 136 83.1
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-56 223.0 136 83.8
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 1.9e-56 222.6 136 82.4
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-56 222.2 119 90.8
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-56 222.2 136 83.1
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 7.4e-53 210.7 119 86.6
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 3.4e-50 201.8 120 81.7
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 4.9e-49 198.0 120 80.8
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-49 197.2 120 80.0
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-49 197.2 120 80.0
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-48 194.5 100 91.0
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 7.1e-48 194.1 120 78.3
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 9.3e-48 193.7 120 79.2
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-47 193.4 120 78.3
Lj5P369T29 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-45 186.8 120 77.5
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.3e-45 185.3 115 78.3
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-44 183.3 120 75.0
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-44 181.0 102 83.3
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 8.1e-44 180.6 111 79.3
Lj4P899T22 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-43 180.3 113 77.0
Lj9P530T13 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-42 175.6 120 72.5
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-40 167.9 119 68.1
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-39 166.4 120 67.5
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-39 165.6 119 68.1
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-39 165.6 87 89.7
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-39 164.5 138 60.1
Lj3P1030T42 Lonicera japonica HOM05D008126 ORTHO05D000309 1.0e-38 163.7 134 64.9
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-38 162.9 119 65.5
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-38 162.9 86 90.7
Lj5P17T12 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-38 162.9 102 75.5
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-38 160.6 120 65.0
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 3.3e-37 158.7 120 65.0
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 5.7e-37 157.9 119 67.2
Lj1P842T49 Lonicera japonica HOM05D008126 ORTHO05D000309 4.8e-36 154.8 105 72.4
Lj9P461T43 Lonicera japonica HOM05D008126 ORTHO05D000309 4.8e-36 154.8 144 54.9
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 6.3e-36 154.5 141 58.2
Lj1P1225T25 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-35 153.7 109 67.0
Lj2P1035T33 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-35 152.1 101 73.3
Lj9P465T64 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-35 151.4 114 66.7
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 2.6e-34 149.1 119 64.7
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 7.6e-34 147.5 119 63.0
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-32 143.7 115 60.0
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-30 134.8 106 62.3
Lj4P611T23 Lonicera japonica HOM05D008126 ORTHO05D000309 3.1e-27 125.6 108 57.4
Lj2P661T3 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-27 124.8 117 53.8
Lj7P342T47 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-26 123.6 110 58.2
Lj1P817T17 Lonicera japonica HOM05D008126 ORTHO05D000309 5.0e-25 118.2 88 63.6
Lj6P361T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.1e-23 112.8 89 60.7
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 3.6e-23 112.1 112 53.6
Lj8P617T6 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-21 107.1 85 60.0
Lj3P956T21 Lonicera japonica HOM05D008126 ORTHO05D000309 5.7e-21 104.8 72 77.8
Lj2P359T36 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-19 100.5 89 56.2
Lj9P201T30 Lonicera japonica HOM05D008126 ORTHO05D000309 1.5e-18 96.7 75 69.3
Lj5P258T10 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-16 90.5 80 58.8
Lj1P1015T13 Lonicera japonica HOM05D008126 ORTHO05D000309 9.1e-11 70.9 55 65.5
Lju9295C0G2 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-10 70.1 115 41.7
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 3.8e-09 65.5 58 51.7
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 5.0e-09 65.1 118 33.1
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 2.5e-08 62.8 55 49.1
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.2e-08 62.4 98 38.8
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.2e-08 62.0 72 41.7
Hma1.2p1_1051F.1_g252070 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 7.2e-08 61.2 55 52.7
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 9.4e-08 60.8 46 50.0
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.4e-08 60.8 82 41.5
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.4e-08 60.8 55 47.3
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-07 60.5 55 45.5
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.2e-07 60.5 55 50.9
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.6e-07 60.1 74 43.2
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 2.1e-07 59.7 120 35.8
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 2.1e-07 59.7 125 30.4
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.1e-07 59.7 74 41.9
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 2.1e-07 59.7 56 46.4
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-07 59.3 104 36.5
BcaB07g33982 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-07 59.3 114 30.7
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-07 59.3 120 35.8
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 2.7e-07 59.3 120 35.8
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.7e-07 59.3 55 45.5
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 2.7e-07 59.3 72 43.1
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 2.7e-07 59.3 60 45.0
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 3.6e-07 58.9 104 35.6
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.6e-07 58.9 70 45.7
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.6e-07 58.9 80 40.0
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 3.6e-07 58.9 42 54.8
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 3.6e-07 58.9 42 54.8
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 3.6e-07 58.9 67 43.3
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 3.6e-07 58.9 65 44.6
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.7e-07 58.5 68 39.7
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 4.7e-07 58.5 55 52.7
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 4.7e-07 58.5 55 52.7
CAN.G1343.17 Capsicum annuum HOM05D009408 ORTHO05D000309 6.1e-07 58.2 89 34.8
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.1e-07 58.2 155 30.3
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.1e-07 58.2 98 35.7
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.1e-07 58.2 49 51.0
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 6.1e-07 58.2 67 41.8
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 6.1e-07 58.2 67 41.8
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 6.1e-07 58.2 67 41.8
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 6.1e-07 58.2 67 41.8
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 6.1e-07 58.2 43 53.5
BcaB03g16006 Brassica carinata HOM05D007774 ORTHO05D000309 8.0e-07 57.8 98 30.6
BcaB06g27901 Brassica carinata HOM05D007774 ORTHO05D000309 8.0e-07 57.8 104 35.6
CAN.G1801.2 Capsicum annuum HOM05D009408 ORTHO05D000309 8.0e-07 57.8 89 36.0
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.0e-07 57.8 70 45.7
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 8.0e-07 57.8 49 51.0
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 8.0e-07 57.8 52 50.0
Rhsim03G0135300 Rhododendron simsii HOM05D010572 ORTHO05D012753 8.0e-07 57.8 45 51.1
BcaB03g16083 Brassica carinata HOM05D007774 ORTHO05D000309 1.0e-06 57.4 120 35.0
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 1.0e-06 57.4 49 51.0
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 1.0e-06 57.4 55 49.1
BolC9t53939H Brassica oleracea HOM05D007774 ORTHO05D000309 1.4e-06 57.0 82 36.6
CAN.G781.1 Capsicum annuum HOM05D009408 ORTHO05D000309 1.4e-06 57.0 46 47.8
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 1.4e-06 57.0 66 42.4
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 1.4e-06 57.0 42 52.4
SGA_v2.0_scaffold211G42175 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-06 57.0 64 43.8
VMungo1383G2600 Vigna mungo HOM05D010006 ORTHO05D009911 1.4e-06 57.0 70 42.9
CAN.G1014.58 Capsicum annuum HOM05D009408 ORTHO05D000309 1.8e-06 56.6 62 45.2
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.8e-06 56.6 80 38.8
Eucgr.G02031 Eucalyptus grandis HOM05D015495 ORTHO05D000309 1.8e-06 56.6 79 38.0
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 73 41.1
SGA_v2.0_scaffold621G53225 Striga asiatica HOM05D011630 ORTHO05D014269 1.8e-06 56.6 54 44.4
BcaC04g20915 Brassica carinata HOM05D007774 ORTHO05D000309 2.3e-06 56.2 116 26.7
BolC2t09463H Brassica oleracea HOM05D007774 ORTHO05D000309 2.3e-06 56.2 82 36.6
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.3e-06 56.2 55 43.6
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.3e-06 56.2 70 44.3
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 2.3e-06 56.2 47 51.1
Peaxi162Scf01216g00039 Petunia axillaris HOM05D004040 ORTHO05D000309 2.3e-06 56.2 69 43.5
SGA_v2.0_scaffold152G36801 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-06 56.2 56 48.2
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 2.3e-06 56.2 135 29.6
SGA_v2.0_scaffold3G01769 Striga asiatica HOM05D001383 ORTHO05D000309 2.3e-06 56.2 56 48.2
CAN.G275.3 Capsicum annuum HOM05D009408 ORTHO05D004497 3.0e-06 55.8 90 33.3
Nitab4.5_0000299g0230 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.0e-06 55.8 49 49.0
Nitab4.5_0000381g0280 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.0e-06 55.8 49 49.0
Nitab4.5_0000682g0010 Nicotiana tabacum HOM05D009794 ORTHO05D000309 3.0e-06 55.8 49 51.0
Peaxi162Scf00002g02917 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 53 50.9
Peaxi162Scf00039g00714 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 55 50.9
Peaxi162Scf00187g01114 Petunia axillaris HOM05D001383 ORTHO05D000309 3.0e-06 55.8 55 50.9
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 3.0e-06 55.8 139 29.5
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 3.0e-06 55.8 135 29.6
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 3.0e-06 55.8 54 42.6
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 3.0e-06 55.8 135 29.6
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 4.0e-06 55.5 110 35.5
CAN.G548.7 Capsicum annuum HOM05D009408 ORTHO05D000309 4.0e-06 55.5 90 32.2
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.0e-06 55.5 120 36.7
Lsat_1_v5_gn_1_98500 Lactuca sativa HOM05D010091 ORTHO05D012356 4.0e-06 55.5 66 40.9
Lsat_1_v5_gn_3_56760 Lactuca sativa HOM05D010091 ORTHO05D000529 4.0e-06 55.5 66 40.9
Nitab4.5_0001759g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.0e-06 55.5 49 49.0
Peaxi162Scf00562g00026 Petunia axillaris HOM05D004040 ORTHO05D000309 4.0e-06 55.5 42 52.4
Peaxi162Scf00814g00243 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-06 55.5 55 49.1
Peaxi162Scf01414g00015 Petunia axillaris HOM05D001383 ORTHO05D000309 4.0e-06 55.5 67 40.3
VMungo0464G1367 Vigna mungo HOM05D008573 ORTHO05D009911 4.0e-06 55.5 81 37.0
BolC5t33238H Brassica oleracea HOM05D007774 ORTHO05D000309 5.2e-06 55.1 67 35.8
Dinv24546 Davidia involucrata HOM05D001383 ORTHO05D000309 5.2e-06 55.1 41 58.5
Lsat_1_v5_gn_9_80080 Lactuca sativa HOM05D010091 ORTHO05D012356 5.2e-06 55.1 66 39.4
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 5.2e-06 55.1 135 29.6
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 5.2e-06 55.1 135 29.6
VMungo1215G0338 Vigna mungo HOM05D002602 ORTHO05D002661 5.2e-06 55.1 96 32.3
BcaB05g23917 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-06 54.7 114 26.3
BcaC04g22268 Brassica carinata HOM05D007774 ORTHO05D000309 6.7e-06 54.7 116 26.7
BolC6t37988H Brassica oleracea HOM05D007774 ORTHO05D000309 6.7e-06 54.7 61 42.6
CiPaw.11G026600 Carya illinoinensis HOM05D009850 ORTHO05D011981 6.7e-06 54.7 55 43.6
COL.COLO4_35283 Corchorus olitorius HOM05D023691 ORTHO05D000309 6.7e-06 54.7 43 51.2
Nitab4.5_0000101g0100 Nicotiana tabacum HOM05D004040 ORTHO05D000309 6.7e-06 54.7 94 36.2
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.7e-06 54.7 49 51.0
Nitab4.5_0002918g0110 Nicotiana tabacum HOM05D009794 ORTHO05D000309 6.7e-06 54.7 41 51.2
Peaxi162Scf00012g01429 Petunia axillaris HOM05D001383 ORTHO05D000309 6.7e-06 54.7 55 47.3
Peaxi162Scf00091g00518 Petunia axillaris HOM05D001383 ORTHO05D000309 6.7e-06 54.7 55 49.1
Peaxi162Scf00100g00811 Petunia axillaris HOM05D004040 ORTHO05D000309 6.7e-06 54.7 43 51.2
Peaxi162Scf00137g00148 Petunia axillaris HOM05D004040 ORTHO05D000309 6.7e-06 54.7 43 51.2
BcaB06g26191 Brassica carinata HOM05D007774 ORTHO05D000309 8.8e-06 54.3 114 29.8
Lsat_1_v5_gn_4_63641 Lactuca sativa HOM05D010091 ORTHO05D012356 8.8e-06 54.3 88 37.5
Rhsim11G0156600 Rhododendron simsii HOM05D010572 ORTHO05D012753 8.8e-06 54.3 80 35.0
VMungo0540G1045 Vigna mungo HOM05D010006 ORTHO05D009911 8.8e-06 54.3 54 42.6


User provided reference genes

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