Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P896T21 Lonicera japonica HOM05D002854 ORTHO05D003051 2.1e-49 198.7 104 100.0
Dinv15450 Davidia involucrata HOM05D002854 ORTHO05D003051 1.9e-26 122.5 104 70.2
CSS0036877 Camellia sinensis var. sinensis HOM05D002854 ORTHO05D003051 1.1e-24 116.7 105 67.6
Hma1.2p1_2203F.1_g317080 Hydrangea macrophylla HOM05D002854 ORTHO05D003051 1.2e-23 113.2 105 67.6
TAR624G0331 Trochodendron aralioides HOM05D002854 ORTHO05D003051 4.2e-21 104.8 104 65.4
Nn2g12752 Nelumbo nucifera HOM05D002854 ORTHO05D003051 1.2e-20 103.2 103 59.2
PSO675G2695 Papaver somniferum HOM05D002854 ORTHO05D003051 1.2e-20 103.2 104 58.7
DCAR_013778 Daucus carota HOM05D002854 ORTHO05D003051 3.5e-20 101.7 107 60.7
vmacro11619 Vaccinium macrocarpon HOM05D002854 ORTHO05D003051 6.1e-20 100.9 103 61.2
Potri.001G468300 Populus trichocarpa HOM05D002854 ORTHO05D003051 1.3e-19 99.8 105 60.0
GSVIVG01014835001 Vitis vinifera HOM05D002854 ORTHO05D003051 3.9e-19 98.2 106 58.5
PSO541G3812 Papaver somniferum HOM05D002854 ORTHO05D003051 5.1e-19 97.8 104 55.8
Actinidia30372 Actinidia chinensis HOM05D002854 ORTHO05D003051 1.5e-18 96.3 108 61.1
Rhsim06G0232900 Rhododendron simsii HOM05D002854 ORTHO05D003051 3.3e-18 95.1 104 54.8
Rhsim04G0009700 Rhododendron simsii HOM05D002854 ORTHO05D003051 2.2e-17 92.4 114 57.9
Potri.011G165400 Populus trichocarpa HOM05D002854 ORTHO05D003051 4.8e-17 91.3 103 54.4
Sabra16G0317500 Salix brachista HOM05D002854 ORTHO05D003051 1.8e-16 89.4 103 58.3
Cc05_g15440 Coffea canephora HOM05D002854 ORTHO05D003051 3.1e-16 88.6 108 56.5
Duzib213G0668 Durio zibethinus HOM05D002854 ORTHO05D003051 4.1e-16 88.2 101 53.5
Sabra11G0140100 Salix brachista HOM05D002854 ORTHO05D003051 5.3e-16 87.8 100 52.0
Thecc.07G005100 Theobroma cacao HOM05D002854 ORTHO05D003051 6.9e-16 87.4 100 56.0
Lsat_1_v5_gn_7_116481 Lactuca sativa HOM05D002854 ORTHO05D003051 1.2e-15 86.7 107 57.9
Phvul.010G102200 Phaseolus vulgaris HOM05D002854 ORTHO05D003051 1.2e-15 86.7 101 56.4
VMungo0331G1734 Vigna mungo HOM05D002854 ORTHO05D003051 2.6e-15 85.5 101 56.4
Ca_03488_v3 Cicer arietinum L. HOM05D002854 ORTHO05D003051 4.5e-15 84.7 101 58.4
COL.COLO4_07763 Corchorus olitorius HOM05D002854 ORTHO05D003051 1.0e-14 83.6 101 52.5
CiPaw.10G167200 Carya illinoinensis HOM05D002854 ORTHO05D003051 2.2e-14 82.4 104 54.8
Gohir.D05G386800 Gossypium hirsutum HOM05D002854 ORTHO05D003051 2.9e-14 82.0 87 60.9
Gorai.009G453500 Gossypium raimondii HOM05D002854 ORTHO05D003051 2.9e-14 82.0 87 60.9
Psat6g048680 Pisum sativum HOM05D002854 ORTHO05D003051 2.9e-14 82.0 102 58.8
Migut.M01616 Erythranthe guttata HOM05D002854 ORTHO05D003051 3.8e-14 81.6 99 55.6
Cpa.g.sc12.96 Carica papaya HOM05D002854 ORTHO05D003051 5.0e-14 81.3 102 52.0
Gohir.A04G002600 Gossypium hirsutum HOM05D002854 ORTHO05D003051 6.5e-14 80.9 94 56.4
QL08p002520 Quercus lobata HOM05D002854 ORTHO05D003051 6.5e-14 80.9 108 54.6
Gohir.A02G114500 Gossypium hirsutum HOM05D002854 ORTHO05D003051 8.5e-14 80.5 99 49.5
Gohir.D03G055500 Gossypium hirsutum HOM05D002854 ORTHO05D003051 8.5e-14 80.5 99 49.5
Gorai.003G058300 Gossypium raimondii HOM05D002854 ORTHO05D003051 8.5e-14 80.5 99 49.5
CANSAT01G0752 Cannabis sativa HOM05D002854 ORTHO05D003051 2.5e-13 79.0 108 48.1
Ca_03501_v3 Cicer arietinum L. HOM05D002854 ORTHO05D003051 3.2e-13 78.6 101 57.4
COL.COLO4_17407 Corchorus olitorius HOM05D002854 ORTHO05D003051 3.2e-13 78.6 99 49.5
MD11G1039000 Malus domestica HOM05D002854 ORTHO05D003051 4.2e-13 78.2 107 50.5
Manes.05G202200 Manihot esculenta HOM05D002854 ORTHO05D003051 4.2e-13 78.2 105 48.6
Sopen12g007810 Solanum pennellii HOM05D002854 ORTHO05D003051 5.5e-13 77.8 102 52.9
Nitab4.5_0000134g0070 Nicotiana tabacum HOM05D002854 ORTHO05D003051 9.4e-13 77.0 99 54.5
Nitab4.5_0010989g0010 Nicotiana tabacum HOM05D002854 ORTHO05D003051 9.4e-13 77.0 103 51.5
RcHm_v2.0_Chr5g0075351 Rosa chinensis HOM05D002854 ORTHO05D003051 9.4e-13 77.0 110 50.9
Cfa021906 Carpinus fangiana HOM05D002854 ORTHO05D003051 1.2e-12 76.6 108 50.0
TWI38G2036 Tripterygium wilfordii HOM05D002854 ORTHO05D003051 1.2e-12 76.6 102 48.0
SalBow3G3879 Salvia bowleyana HOM05D002854 ORTHO05D003051 1.6e-12 76.3 104 49.0
Phvul.010G105600 Phaseolus vulgaris HOM05D002854 ORTHO05D003051 2.1e-12 75.9 100 52.0
Solyc12g015820.1 Solanum lycopersicum HOM05D002854 ORTHO05D003051 2.1e-12 75.9 102 52.9
Aqoxy7G00765 Aquilegia oxysepala HOM05D002854 ORTHO05D003051 2.7e-12 75.5 103 50.5
C01p22490 Brassica napus HOM05D002854 ORTHO05D003051 2.7e-12 75.5 105 55.2
BolC1t02180H Brassica oleracea HOM05D002854 ORTHO05D003051 2.7e-12 75.5 105 55.2
FvH4_3g42140 Fragaria vesca HOM05D002854 ORTHO05D003051 3.6e-12 75.1 104 51.9
FAN11G1641 Fragaria x ananassa HOM05D000722 ORTHO05D003051 3.6e-12 75.1 104 51.9
Nitab4.5_0000598g0090 Nicotiana tabacum HOM05D002854 ORTHO05D003051 4.6e-12 74.7 103 50.5
vmacro09612 Vaccinium macrocarpon HOM05D002854 ORTHO05D003051 6.1e-12 74.3 108 54.6
Ah.03g134530 Amaranthus hybridus HOM05D002854 ORTHO05D003051 7.9e-12 73.9 101 50.5
Duzib170G1116 Durio zibethinus HOM05D002854 ORTHO05D003051 7.9e-12 73.9 97 49.5
Oeu049427.2 Olea europaea HOM05D002854 ORTHO05D003051 7.9e-12 73.9 100 53.0
Peaxi162Scf00006g00715 Petunia axillaris HOM05D002854 ORTHO05D003051 7.9e-12 73.9 96 52.1
Sed0026831 Sechium edule HOM05D002854 ORTHO05D003051 7.9e-12 73.9 103 54.4
Haze_09882 Corylus avellana HOM05D002854 ORTHO05D003051 1.0e-11 73.6 106 50.0
FAN25G3339 Fragaria x ananassa HOM05D002854 ORTHO05D003051 1.0e-11 73.6 104 51.0
TWI39G1293 Tripterygium wilfordii HOM05D002854 ORTHO05D003051 1.4e-11 73.2 102 47.1
A01p17770 Brassica napus HOM05D002854 ORTHO05D003051 2.3e-11 72.4 104 54.8
FAN21G1355 Fragaria x ananassa HOM05D000722 ORTHO05D003051 2.3e-11 72.4 103 48.5
Sc03g0011680 Simmondsia chinensis HOM05D002854 ORTHO05D003051 2.3e-11 72.4 101 49.5
THA.LOC104813459 Tarenaya hassleriana HOM05D002854 ORTHO05D003051 2.3e-11 72.4 81 60.5
Glyma.07G062400 Glycine max HOM05D002854 ORTHO05D003051 3.0e-11 72.0 105 49.5
CARHR234090 Cardamine hirsuta HOM05D002854 ORTHO05D003051 5.1e-11 71.2 102 52.9
Sopen02g026450 Solanum pennellii HOM05D002854 ORTHO05D003051 5.1e-11 71.2 103 52.4
BcaC09g50717 Brassica carinata HOM05D002854 ORTHO05D003051 6.7e-11 70.9 103 53.4
Ciclev10008763m.g Citrus clementina HOM05D002854 ORTHO05D003051 6.7e-11 70.9 102 47.1
Ca_28527_v3 Cicer arietinum L. HOM05D002854 ORTHO05D003051 8.8e-11 70.5 61 68.9
Thhalv10027252m.g Eutrema salsugineum HOM05D002854 ORTHO05D003051 8.8e-11 70.5 102 52.0
Solyc12g015910.1 Solanum lycopersicum HOM05D002854 ORTHO05D003051 8.8e-11 70.5 101 51.5
VMungo0331G0648 Vigna mungo HOM05D002854 ORTHO05D003051 8.8e-11 70.5 107 47.7
Aa31LG5G11870 Aethionema arabicum HOM05D002854 ORTHO05D003051 1.1e-10 70.1 104 52.9
MBI15_g19867_MAGBIO Magnolia biondii HOM05D002854 ORTHO05D003051 1.1e-10 70.1 104 45.2
Atru.chr2.3884 Acer truncatum HOM05D002854 ORTHO05D003051 1.5e-10 69.7 102 43.1
BcaNung02408 Brassica carinata HOM05D002854 ORTHO05D003051 1.5e-10 69.7 61 67.2
Oeu053370.1 Olea europaea HOM05D002854 ORTHO05D003051 1.5e-10 69.7 108 51.9
PGR083G1211 Punica granatum HOM05D002854 ORTHO05D003051 1.5e-10 69.7 104 49.0
Prupe.6G029600 Prunus persica HOM05D002854 ORTHO05D003051 2.0e-10 69.3 116 44.8
THA.LOC104817723 Tarenaya hassleriana HOM05D002854 ORTHO05D003051 2.0e-10 69.3 90 54.4
CsaV3_7G021450 Cucumis sativus L. HOM05D002854 ORTHO05D003051 3.3e-10 68.6 65 61.5
ClCG09G021620 Citrullus lanatus HOM05D002854 ORTHO05D003051 4.3e-10 68.2 104 50.0
Eucgr.F02016 Eucalyptus grandis HOM05D002854 ORTHO05D003051 4.3e-10 68.2 105 44.8
AT4G26500 Arabidopsis thaliana HOM05D002854 ORTHO05D003051 5.7e-10 67.8 103 48.5
CAN.G222.157 Capsicum annuum HOM05D002854 ORTHO05D003051 5.7e-10 67.8 95 51.6
Medtr1g047990 Medicago truncatula HOM05D002854 ORTHO05D003051 5.7e-10 67.8 101 49.5
EL10Ac4g09787 Beta vulgaris HOM05D002854 ORTHO05D003051 7.4e-10 67.4 106 46.2
Lj3g0013242 Lotus japonicus HOM05D002854 ORTHO05D003051 7.4e-10 67.4 109 47.7
FAN16G0314 Fragaria x ananassa HOM05D000722 ORTHO05D003051 2.8e-09 65.5 108 43.5
Lalb_Chr04g0259341 Lupinus albus HOM05D002854 ORTHO05D003051 2.8e-09 65.5 68 57.4
Sp7g24460 Schrenkiella parvula HOM05D002854 ORTHO05D003051 2.8e-09 65.5 102 50.0
PGSC0003DMG402029805 Solanum tuberosum HOM05D002854 ORTHO05D003051 2.8e-09 65.5 117 45.3
arahy.Tifrunner.gnm1.ann1.SCBD8U Arachis hypogaea HOM05D002854 ORTHO05D003051 4.8e-09 64.7 119 44.5
AL7G26420 Arabidopsis lyrata HOM05D002854 ORTHO05D003051 8.2e-09 63.9 82 57.3
Lsat_1_v5_gn_9_89180 Lactuca sativa HOM05D002854 ORTHO05D003051 1.4e-08 63.2 111 45.0
arahy.Tifrunner.gnm1.ann1.542A2E Arachis hypogaea HOM05D002854 ORTHO05D003051 1.8e-08 62.8 118 44.9
unitig_21.g20271 Utricularia gibba HOM05D002854 ORTHO05D003051 5.3e-08 61.2 103 44.7
SalBow7G2944 Salvia bowleyana HOM05D002854 ORTHO05D003051 6.9e-08 60.8 48 70.8
SGA_v2.0_scaffold7G03530 Striga asiatica HOM05D002854 ORTHO05D003051 6.9e-08 60.8 102 48.0
TPR.G27227 Trifolium pratense HOM05D002854 ORTHO05D003051 6.9e-08 60.8 98 45.9
Carub.0007s1438 Capsella rubella HOM05D002854 ORTHO05D003051 1.2e-07 60.1 102 46.1
SGA_v2.0_scaffold168G38585 Striga asiatica HOM05D002854 ORTHO05D003051 2.0e-07 59.3 39 71.8
VMungo1383G1078 Vigna mungo HOM05D002854 ORTHO05D003051 2.0e-07 59.3 42 73.8
CSS0015002 Camellia sinensis var. sinensis HOM05D002854 ORTHO05D003051 2.6e-07 58.9 40 72.5
Cpa.g.sc3.441 Carica papaya HOM05D002854 ORTHO05D003051 5.9e-07 57.8 90 46.7
BcaC06g32740 Brassica carinata HOM05D002854 ORTHO05D003051 2.9e-06 55.5 33 78.8
Sabra04G0001900 Salix brachista HOM05D002854 ORTHO05D003051 3.8e-06 55.1 35 74.3
ECA236G2755 Erigeron canadensis HOM05D002854 ORTHO05D003051 8.5e-06 53.9 35 68.6
HanXRQChr03g0080451 Helianthus annuus HOM05D002854 ORTHO05D003051 8.5e-06 53.9 114 41.2


User provided reference genes

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