Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P884T63 Lonicera japonica HOM05D000033 ORTHO05D043816 1.9e-36 155.2 73 100.0
CSS0031691 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D010119 2.7e-22 108.2 72 70.8
Lj8A176T67 Lonicera japonica HOM05D000033 ORTHO05D010119 5.9e-22 107.1 67 74.6
Hma1.2p1_0036F.1_g022780 Hydrangea macrophylla HOM05D000033 ORTHO05D010119 1.7e-21 105.5 72 70.8
Actinidia39074 Actinidia chinensis HOM05D000033 ORTHO05D010119 2.9e-21 104.8 71 70.4
DCAR_013211 Daucus carota HOM05D000033 ORTHO05D010119 5.0e-21 104.0 71 66.2
DCAR_017093 Daucus carota HOM05D000033 ORTHO05D010119 1.5e-20 102.4 70 68.6
TAR624G1216 Trochodendron aralioides HOM05D000033 ORTHO05D010119 2.8e-19 98.2 73 68.5
Lsat_1_v5_gn_7_113400 Lactuca sativa HOM05D000033 ORTHO05D010119 1.5e-17 92.4 70 65.7
Dinv40831 Davidia involucrata HOM05D000033 ORTHO05D010119 2.6e-17 91.7 52 78.8
ECA236G2717 Erigeron canadensis HOM05D000033 ORTHO05D010119 7.5e-17 90.1 55 72.7
TWI38G2181 Tripterygium wilfordii HOM05D000033 ORTHO05D010119 9.8e-17 89.7 73 64.4
Oeu005973.1 Olea europaea HOM05D000033 ORTHO05D010119 1.7e-16 89.0 63 65.1
TWI39G0153 Tripterygium wilfordii HOM05D000033 ORTHO05D010119 2.2e-16 88.6 73 63.0
MBI16_g11550_MAGBIO Magnolia biondii HOM05D000033 ORTHO05D010119 2.8e-16 88.2 72 61.1
Nitab4.5_0000461g0030 Nicotiana tabacum HOM05D000033 ORTHO05D010119 2.8e-16 88.2 70 60.0
Peaxi162Scf00285g00927 Petunia axillaris HOM05D000033 ORTHO05D010119 4.9e-16 87.4 70 60.0
CAN.G337.32 Capsicum annuum HOM05D000033 ORTHO05D010119 8.3e-16 86.7 70 60.0
Duzib213G0429 Durio zibethinus HOM05D000033 ORTHO05D010119 8.3e-16 86.7 71 62.0
Sopen07g033450 Solanum pennellii HOM05D000033 ORTHO05D010119 8.3e-16 86.7 70 58.6
Nitab4.5_0008232g0010 Nicotiana tabacum HOM05D000033 ORTHO05D010119 1.1e-15 86.3 70 60.0
CiPaw.11G200400 Carya illinoinensis HOM05D000033 ORTHO05D043816 1.4e-15 85.9 73 57.5
Ciclev10010218m.g Citrus clementina HOM05D000033 ORTHO05D010119 1.4e-15 85.9 60 66.7
Thecc.07G023200 Theobroma cacao HOM05D000033 ORTHO05D010119 1.4e-15 85.9 71 62.0
PGSC0003DMG400022189 Solanum tuberosum HOM05D000033 ORTHO05D010119 1.8e-15 85.5 70 57.1
Cc05_g14620 Coffea canephora HOM05D000033 ORTHO05D010119 3.2e-15 84.7 69 60.9
Cfa020235 Carpinus fangiana HOM05D000033 ORTHO05D010119 5.4e-15 84.0 55 72.7
Gohir.A13G135000 Gossypium hirsutum HOM05D000033 ORTHO05D010119 7.0e-15 83.6 71 62.0
Haze_09781 Corylus avellana HOM05D000033 ORTHO05D010119 9.2e-15 83.2 68 61.8
Gohir.D13G139400 Gossypium hirsutum HOM05D000033 ORTHO05D010119 1.2e-14 82.8 71 60.6
Gorai.013G156100 Gossypium raimondii HOM05D000033 ORTHO05D010119 1.2e-14 82.8 71 60.6
Aqoxy1G04017 Aquilegia oxysepala HOM05D000033 ORTHO05D010119 2.0e-14 82.0 72 59.7
Manes.03G137400 Manihot esculenta HOM05D000033 ORTHO05D010119 2.7e-14 81.6 72 58.3
Eucgr.F00623 Eucalyptus grandis HOM05D000033 ORTHO05D010119 3.5e-14 81.3 57 68.4
COL.COLO4_09779 Corchorus olitorius HOM05D000033 ORTHO05D010119 4.6e-14 80.9 71 57.7
Gohir.D01G073000 Gossypium hirsutum HOM05D000033 ORTHO05D010119 7.8e-14 80.1 71 57.7
Gorai.002G096000 Gossypium raimondii HOM05D000033 ORTHO05D010119 7.8e-14 80.1 71 57.7
ATR1149G104 Amborella trichopoda HOM05D000033 ORTHO05D010119 1.0e-13 79.7 73 54.8
Oeu054325.1 Olea europaea HOM05D000033 ORTHO05D010119 1.7e-13 79.0 71 53.5
Potri.011G088000 Populus trichocarpa HOM05D000033 ORTHO05D010119 2.9e-13 78.2 61 63.9
Phvul.008G275000 Phaseolus vulgaris HOM05D000033 ORTHO05D010119 6.6e-13 77.0 72 52.8
Cpa.g.sc12.199 Carica papaya HOM05D000033 ORTHO05D010119 1.1e-12 76.3 61 60.7
Gohir.A01G086800 Gossypium hirsutum HOM05D000033 ORTHO05D010119 2.5e-12 75.1 71 54.9
CANSAT11G1838 Cannabis sativa HOM05D000033 ORTHO05D010119 3.3e-12 74.7 76 53.9
Glyma.02G297100 Glycine max HOM05D000033 ORTHO05D010119 3.3e-12 74.7 72 54.2
Prupe.4G232000 Prunus persica HOM05D000033 ORTHO05D010119 7.3e-12 73.6 60 61.7
FvH4_3g23970 Fragaria vesca HOM05D000033 ORTHO05D010119 9.5e-12 73.2 55 60.0
FAN11G0982 Fragaria x ananassa HOM05D000033 ORTHO05D010119 9.5e-12 73.2 55 60.0
RcHm_v2.0_Chr5g0042511 Rosa chinensis HOM05D000033 ORTHO05D010119 9.5e-12 73.2 55 60.0
VMungo0647G0231 Vigna mungo HOM05D000033 ORTHO05D010119 9.5e-12 73.2 67 53.7
FAN16G1389 Fragaria x ananassa HOM05D000033 ORTHO05D010119 1.6e-11 72.4 55 60.0
FAN21G2377 Fragaria x ananassa HOM05D000033 ORTHO05D010119 1.6e-11 72.4 55 60.0
FAN25G0080 Fragaria x ananassa HOM05D000033 ORTHO05D010119 1.6e-11 72.4 55 60.0
FAN25G2758 Fragaria x ananassa HOM05D000033 ORTHO05D010119 1.6e-11 72.4 55 60.0
PGR083G0088 Punica granatum HOM05D000033 ORTHO05D010119 2.8e-11 71.6 54 64.8
Psat0s2739g0080 Pisum sativum HOM05D000033 ORTHO05D010119 6.1e-11 70.5 59 61.0
Medtr5g094380 Medicago truncatula HOM05D000033 ORTHO05D010119 1.4e-10 69.3 59 61.0
arahy.Tifrunner.gnm1.ann1.N3INHP Arachis hypogaea HOM05D000033 ORTHO05D010119 2.3e-10 68.6 59 54.2
MD11G1205400 Malus domestica HOM05D000033 ORTHO05D010119 2.3e-10 68.6 56 60.7
LjContig00272g0022031 Lotus japonicus HOM05D000033 ORTHO05D010119 1.5e-09 65.9 57 57.9
ClCG09G021140 Citrullus lanatus HOM05D000033 ORTHO05D010119 2.0e-09 65.5 60 51.7
CsaV3_7G018430 Cucumis sativus L. HOM05D000033 ORTHO05D010119 2.6e-09 65.1 59 54.2
TPR.G31725 Trifolium pratense HOM05D000033 ORTHO05D010119 3.4e-09 64.7 60 55.0
Sed0021336 Sechium edule HOM05D000033 ORTHO05D010119 5.8e-09 63.9 60 53.3
MELO3C024912.2 Cucumis melo HOM05D000033 ORTHO05D010119 9.8e-09 63.2 59 50.8
SalBow8G1868 Salvia bowleyana HOM05D000033 ORTHO05D010119 1.7e-08 62.4 54 57.4
Ah.07g197030 Amaranthus hybridus HOM05D000033 ORTHO05D001999 1.6e-06 55.8 59 45.8
DCAR_006860 Daucus carota HOM05D000033 ORTHO05D001999 1.6e-06 55.8 56 48.2
Glyma.15G052900 Glycine max HOM05D000033 ORTHO05D010114 2.0e-06 55.5 61 44.3
TPR.G13607 Trifolium pratense HOM05D000033 ORTHO05D010114 2.7e-06 55.1 59 44.1
ATR1125G124 Amborella trichopoda HOM05D000033 ORTHO05D004067 3.5e-06 54.7 56 48.2
CSS0043465 Camellia sinensis var. sinensis HOM05D000033 ORTHO05D001999 3.5e-06 54.7 74 36.5
CARHR266360 Cardamine hirsuta HOM05D000033 ORTHO05D013408 3.5e-06 54.7 56 44.6
Medtr2g008740 Medicago truncatula HOM05D000033 ORTHO05D010114 3.5e-06 54.7 59 42.4
Oeu046822.1 Olea europaea HOM05D000033 ORTHO05D001999 3.5e-06 54.7 71 40.8
Psat1g216800 Pisum sativum HOM05D000033 ORTHO05D010114 3.5e-06 54.7 59 44.1
Carub.0008s1350 Capsella rubella HOM05D000033 ORTHO05D013408 4.6e-06 54.3 56 44.6
AT5G53320 Arabidopsis thaliana HOM05D000033 ORTHO05D013408 6.0e-06 53.9 56 44.6
BcaB01g04534 Brassica carinata HOM05D000033 ORTHO05D000913 6.0e-06 53.9 56 48.2
BcaC01g06244 Brassica carinata HOM05D000033 ORTHO05D013408 6.0e-06 53.9 56 44.6
A03p12320 Brassica napus HOM05D000033 ORTHO05D000913 6.0e-06 53.9 56 48.2
C03p14470 Brassica napus HOM05D000033 ORTHO05D000913 6.0e-06 53.9 56 48.2
C03p17730 Brassica napus HOM05D000033 ORTHO05D013408 6.0e-06 53.9 56 44.6
BolC3t13888H Brassica oleracea HOM05D000033 ORTHO05D000913 6.0e-06 53.9 56 48.2
BolC3t14183H Brassica oleracea HOM05D000033 ORTHO05D013408 6.0e-06 53.9 56 44.6
BraA03t10543Z Brassica rapa HOM05D000033 ORTHO05D000913 6.0e-06 53.9 56 48.2
Nitab4.5_0002046g0100 Nicotiana tabacum HOM05D000033 ORTHO05D001583 6.0e-06 53.9 56 44.6
Peaxi162Scf00314g00426 Petunia axillaris HOM05D000033 ORTHO05D001583 6.0e-06 53.9 56 44.6
Sp6g15470 Schrenkiella parvula HOM05D000033 ORTHO05D013408 6.0e-06 53.9 56 44.6
Actinidia08616 Actinidia chinensis HOM05D000033 ORTHO05D001999 7.8e-06 53.5 74 37.8
CDE04G1450 Ceratophyllum demersum HOM05D000033 ORTHO05D000913 7.8e-06 53.5 74 43.2
Medtr5g068210 Medicago truncatula HOM05D000033 ORTHO05D000913 7.8e-06 53.5 75 40.0
PSO063G7631 Papaver somniferum HOM05D000033 ORTHO05D001999 7.8e-06 53.5 74 36.5
THA.LOC104825192 Tarenaya hassleriana HOM05D000033 ORTHO05D013408 7.8e-06 53.5 56 42.9


User provided reference genes

Program Settings