Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P863T33 Lonicera japonica HOM05D007184 ORTHO05D008987 1.6e-101 372.9 198 100.0
Sopen07g032240 Solanum pennellii HOM05D007184 ORTHO05D008987 1.4e-62 243.4 206 71.8
Nitab4.5_0000397g0060 Nicotiana tabacum HOM05D007184 ORTHO05D008987 1.2e-61 240.4 205 70.7
ECA246G2094 Erigeron canadensis HOM05D003993 ORTHO05D005336 2.7e-61 239.2 183 72.7
Lsat_1_v5_gn_5_5700 Lactuca sativa HOM05D003993 ORTHO05D005336 3.5e-61 238.8 180 74.4
Solyc07g064100.1 Solanum lycopersicum HOM05D007184 ORTHO05D008987 3.5e-61 238.8 206 70.4
PGSC0003DMG400019260 Solanum tuberosum HOM05D007184 ORTHO05D008987 4.6e-61 238.4 209 70.8
HanXRQChr05g0159221 Helianthus annuus HOM05D007184 ORTHO05D008987 6.0e-61 238.0 200 67.5
Nitab4.5_0009192g0030 Nicotiana tabacum HOM05D007184 ORTHO05D008987 6.0e-61 238.0 198 71.2
CSS0032425 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 2.3e-60 236.1 216 67.6
CSS0036378 Camellia sinensis var. sinensis HOM05D007184 ORTHO05D008987 2.3e-60 236.1 216 67.6
Hma1.2p1_1869F.1_g306030 Hydrangea macrophylla HOM05D007184 ORTHO05D008987 6.7e-60 234.6 181 75.1
Oeu062614.1 Olea europaea HOM05D007184 ORTHO05D008987 6.7e-60 234.6 215 65.6
Migut.H01857 Erythranthe guttata HOM05D007184 ORTHO05D008987 5.7e-59 231.5 217 62.2
Peaxi162Scf01086g00015 Petunia axillaris HOM05D007184 ORTHO05D008987 7.4e-59 231.1 206 68.0
Carub.0001s4001 Capsella rubella HOM05D007184 ORTHO05D008987 4.8e-58 228.4 213 65.3
Ciclev10009433m.g Citrus clementina HOM05D007184 ORTHO05D008987 1.4e-57 226.9 193 66.3
Gohir.D13G146000 Gossypium hirsutum HOM05D007184 ORTHO05D008987 1.8e-57 226.5 199 65.8
Thhalv10011779m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 3.1e-57 225.7 177 72.9
Gohir.A13G141300 Gossypium hirsutum HOM05D007184 ORTHO05D008987 4.1e-57 225.3 199 65.8
SalBow7G0016 Salvia bowleyana HOM05D007184 ORTHO05D008987 6.9e-57 224.6 196 64.3
Thecc.07G052800 Theobroma cacao HOM05D007184 ORTHO05D008987 6.9e-57 224.6 210 65.2
CARHR041120 Cardamine hirsuta HOM05D007184 ORTHO05D008987 9.0e-57 224.2 213 64.8
Gorai.013G163800 Gossypium raimondii HOM05D007184 ORTHO05D008987 1.2e-56 223.8 199 65.3
Sp1g37830 Schrenkiella parvula HOM05D007184 ORTHO05D008987 1.2e-56 223.8 213 65.3
AUR62020554 Chenopodium quinoa HOM05D007184 ORTHO05D008987 1.5e-56 223.4 190 67.9
AT1G51100 Arabidopsis thaliana HOM05D007184 ORTHO05D008987 2.6e-56 222.6 187 69.0
EL10Ac4g07971 Beta vulgaris HOM05D007184 ORTHO05D008987 2.6e-56 222.6 188 67.6
TAR624G0273 Trochodendron aralioides HOM05D007184 ORTHO05D008987 4.5e-56 221.9 214 65.4
AUR62015645 Chenopodium quinoa HOM05D007184 ORTHO05D008987 5.9e-56 221.5 214 63.1
COL.COLO4_09571 Corchorus olitorius HOM05D007184 ORTHO05D008987 5.9e-56 221.5 202 67.3
Glyma.13G287300 Glycine max HOM05D007184 ORTHO05D008987 7.6e-56 221.1 194 66.0
A06p02680 Brassica napus HOM05D007184 ORTHO05D008987 1.0e-55 220.7 214 64.0
Cpa.g.sc97.69 Carica papaya HOM05D007184 ORTHO05D008987 1.0e-55 220.7 150 77.3
FvH4_3g21830 Fragaria vesca HOM05D007184 ORTHO05D008987 1.0e-55 220.7 175 72.0
FAN11G2616 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.0e-55 220.7 175 72.0
BcaB07g33556 Brassica carinata HOM05D007184 ORTHO05D008987 1.3e-55 220.3 189 68.3
Glyma.12G214300 Glycine max HOM05D007184 ORTHO05D008987 1.3e-55 220.3 194 66.5
AL1G58900 Arabidopsis lyrata HOM05D007184 ORTHO05D008987 1.7e-55 219.9 217 61.3
FAN21G0378 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.7e-55 219.9 175 71.4
BcaC08g43280 Brassica carinata HOM05D007184 ORTHO05D008987 2.2e-55 219.5 215 63.7
C06p06300 Brassica napus HOM05D007184 ORTHO05D008987 2.2e-55 219.5 215 63.7
BolC6t35739H Brassica oleracea HOM05D007184 ORTHO05D008987 2.2e-55 219.5 215 63.7
BraA06t23477Z Brassica rapa HOM05D007184 ORTHO05D008987 2.2e-55 219.5 214 64.0
Duzib268G1070 Durio zibethinus HOM05D007184 ORTHO05D008987 2.9e-55 219.2 179 70.4
Manes.03G122800 Manihot esculenta HOM05D007184 ORTHO05D008987 2.9e-55 219.2 182 70.9
FAN25G3727 Fragaria x ananassa HOM05D007184 ORTHO05D008987 3.8e-55 218.8 175 70.9
Cc05_g13240 Coffea canephora HOM05D007184 ORTHO05D008987 6.5e-55 218.0 190 67.4
Lalb_Chr14g0366141 Lupinus albus HOM05D007184 ORTHO05D008987 8.4e-55 217.6 208 63.5
RcHm_v2.0_Chr4g0410121 Rosa chinensis HOM05D007184 ORTHO05D008987 1.9e-54 216.5 175 70.3
PGR031G2970 Punica granatum HOM05D007184 ORTHO05D008987 4.2e-54 215.3 188 64.9
Prupe.4G202500 Prunus persica HOM05D007184 ORTHO05D008987 5.5e-54 214.9 168 71.4
RcHm_v2.0_Chr5g0037571 Rosa chinensis HOM05D007184 ORTHO05D008987 5.5e-54 214.9 175 70.3
Atru.BG.150.p Acer truncatum HOM05D007184 ORTHO05D008987 9.3e-54 214.2 162 74.1
Cfa020415 Carpinus fangiana HOM05D007184 ORTHO05D008987 9.3e-54 214.2 210 62.9
Nn1g03662 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.2e-53 213.8 150 78.0
Potri.011G132900 Populus trichocarpa HOM05D007184 ORTHO05D008987 1.2e-53 213.8 182 67.6
ClCG10G005800 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.6e-53 213.4 188 67.0
THA.LOC104817896 Tarenaya hassleriana HOM05D007184 ORTHO05D008987 1.6e-53 213.4 153 75.8
VMungo1080G0323 Vigna mungo HOM05D007184 ORTHO05D008987 2.1e-53 213.0 213 61.0
MD03G1211500 Malus domestica HOM05D007184 ORTHO05D008987 6.1e-53 211.5 194 63.9
CsaV3_3G005480 Cucumis sativus L. HOM05D007184 ORTHO05D008987 7.9e-53 211.1 177 67.8
Phvul.005G091600 Phaseolus vulgaris HOM05D007184 ORTHO05D008987 7.9e-53 211.1 178 68.0
Sabra11G0119700 Salix brachista HOM05D007184 ORTHO05D008987 1.0e-52 210.7 216 60.2
CANSAT11G2419 Cannabis sativa HOM05D007184 ORTHO05D008987 1.3e-52 210.3 214 61.7
Psat5g251800 Pisum sativum HOM05D007184 ORTHO05D008987 1.8e-52 209.9 211 63.5
MELO3C016627.2 Cucumis melo HOM05D007184 ORTHO05D008987 2.3e-52 209.5 175 68.0
Ca_01753_v3 Cicer arietinum L. HOM05D007184 ORTHO05D008987 3.0e-52 209.1 174 68.4
QL08p013337 Quercus lobata HOM05D007184 ORTHO05D008987 6.7e-52 208.0 228 57.9
CiPaw.11G183700 Carya illinoinensis HOM05D007184 ORTHO05D008987 8.7e-52 207.6 195 64.6
Medtr2g082930 Medicago truncatula HOM05D007184 ORTHO05D008987 8.7e-52 207.6 216 59.3
QL08p013467 Quercus lobata HOM05D007184 ORTHO05D008987 1.1e-51 207.2 202 61.4
unitig_52.g17357 Utricularia gibba HOM05D007184 ORTHO05D008987 1.1e-51 207.2 163 70.6
Lj3g0025244 Lotus japonicus HOM05D007184 ORTHO05D008987 1.9e-51 206.5 218 59.2
MBI12_g14496_MAGBIO Magnolia biondii HOM05D007184 ORTHO05D008987 2.5e-51 206.1 204 64.2
GSVIVG01014606001 Vitis vinifera HOM05D007184 ORTHO05D008987 7.4e-51 204.5 206 62.6
TPR.G36807 Trifolium pratense HOM05D007184 ORTHO05D008987 9.7e-51 204.1 180 66.7
TWI38G1172 Tripterygium wilfordii HOM05D007184 ORTHO05D008987 6.3e-50 201.4 219 58.9
PSO541G2827 Papaver somniferum HOM05D007184 ORTHO05D008987 8.2e-50 201.1 178 71.3
Aa31LG10G3410 Aethionema arabicum HOM05D006358 ORTHO05D008185 1.1e-49 200.7 169 66.3
PSO675G5359 Papaver somniferum HOM05D007184 ORTHO05D008987 1.8e-49 199.9 178 70.2
arahy.Tifrunner.gnm1.ann1.538Z4G Arachis hypogaea HOM05D007184 ORTHO05D008987 2.4e-49 199.5 180 63.3
QL08p013286 Quercus lobata HOM05D007184 ORTHO05D008987 2.5e-46 189.5 210 56.2
Aqoxy4G02072 Aquilegia oxysepala HOM05D007184 ORTHO05D008987 4.2e-46 188.7 185 62.7
ClCG03G004100 Citrullus lanatus HOM05D007184 ORTHO05D008987 1.2e-45 187.2 178 62.4
CDE05G0960 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 4.6e-45 185.3 178 64.0
Haze_09610 Corylus avellana HOM05D007184 ORTHO05D008987 4.6e-45 185.3 197 58.9
ATR0073G001 Amborella trichopoda HOM05D007184 ORTHO05D008987 1.4e-44 183.7 158 63.3
Sed0004555 Sechium edule HOM05D007184 ORTHO05D008987 3.9e-44 182.2 208 56.7
CDE11G0483 Ceratophyllum demersum HOM05D007184 ORTHO05D008987 1.2e-40 170.6 151 66.2
Os01g0676200 Oryza sativa ssp. japonica HOM05D007184 ORTHO05D008987 3.2e-38 162.5 163 60.7
Eucgr.F03426 Eucalyptus grandis HOM05D007184 ORTHO05D008987 9.4e-38 161.0 118 75.4
Zm00001eb156870 Zea mays HOM05D007184 ORTHO05D008987 6.1e-37 158.3 165 57.6
DCAR_010017 Daucus carota HOM05D007184 ORTHO05D008987 2.0e-35 153.3 107 77.6
QL08p013784 Quercus lobata HOM05D007184 ORTHO05D008987 1.4e-33 147.1 201 52.2
EL10Ac1g02068 Beta vulgaris HOM05D007184 ORTHO05D008987 3.2e-30 136.0 106 69.8
QL08p060543 Quercus lobata HOM05D000807 ORTHO05D008987 1.2e-24 117.5 82 79.3
QL08p060183 Quercus lobata HOM05D000807 ORTHO05D008987 7.7e-24 114.8 82 78.0
Lju3590C0T1 Lonicera japonica HOM05D007184 ORTHO05D008987 2.7e-21 106.3 59 100.0
SEGI_35792 Sequoiadendron giganteum HOM05D007184 ORTHO05D008987 2.7e-21 106.3 171 38.0
BcaB07g33555 Brassica carinata HOM05D007184 ORTHO05D008987 1.8e-20 103.6 114 54.4
Potri.001G417350 Populus trichocarpa HOM05D007184 ORTHO05D008987 4.0e-20 102.4 74 75.7
Nn1g08505 Nelumbo nucifera HOM05D007184 ORTHO05D008987 1.5e-19 100.5 88 62.5
Sc03g0008930 Simmondsia chinensis HOM05D007184 ORTHO05D008987 3.7e-18 95.9 102 57.8
Thhalv10012149m.g Eutrema salsugineum HOM05D007184 ORTHO05D008987 9.1e-17 91.3 78 62.8
Pp3c11_19690 Physcomitrium patens HOM05D007184 ORTHO05D008987 8.5e-15 84.7 112 42.0
FvH4_7g08050 Fragaria vesca HOM05D007184 ORTHO05D008987 9.2e-09 64.7 46 71.7
FAN01G2498 Fragaria x ananassa HOM05D007184 ORTHO05D008987 1.6e-08 63.9 44 75.0
Mapoly0032s0044 Marchantia polymorpha HOM05D007184 ORTHO05D008987 3.5e-08 62.8 114 38.6
CBR_g19283 Chara braunii HOM05D007184 ORTHO05D008987 1.7e-07 60.5 103 34.0


User provided reference genes

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