Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P796T26 Lonicera japonica HOM05D006015 ORTHO05D007816 3.5e-213 744.6 344 100.0
CSS0038739 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.1e-177 625.2 342 81.6
Rhsim06G0176400 Rhododendron simsii HOM05D006015 ORTHO05D007816 6.8e-177 624.0 342 80.7
DCAR_019683 Daucus carota HOM05D006015 ORTHO05D007816 5.8e-176 620.9 335 81.5
COL.COLO4_33334 Corchorus olitorius HOM05D006015 ORTHO05D007816 8.3e-175 617.1 336 81.2
Thecc.01G195800 Theobroma cacao HOM05D006015 ORTHO05D007816 8.3e-175 617.1 343 79.6
Lj8P135T89 Lonicera japonica HOM05D006015 ORTHO05D007816 1.4e-174 616.3 335 81.2
vmacro12084 Vaccinium macrocarpon HOM05D006015 ORTHO05D007816 1.4e-174 616.3 341 79.8
Gohir.A11G149000 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.1e-174 614.8 337 80.4
Rhsim04G0027900 Rhododendron simsii HOM05D006015 ORTHO05D007816 5.4e-174 614.4 337 81.0
Duzib138G1954 Durio zibethinus HOM05D006015 ORTHO05D007816 7.0e-174 614.0 344 79.9
Gohir.D11G156100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 9.2e-174 613.6 335 81.2
Migut.K00073 Erythranthe guttata HOM05D006015 ORTHO05D007816 2.0e-173 612.5 334 80.5
Gorai.007G166200 Gossypium raimondii HOM05D006015 ORTHO05D007816 6.0e-173 610.9 335 80.6
QL04p068533 Quercus lobata HOM05D006015 ORTHO05D007816 6.0e-173 610.9 336 80.7
CSS0001355 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.0e-172 608.6 341 79.2
CSS0036117 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D007816 3.0e-172 608.6 341 79.2
Oeu064356.1 Olea europaea HOM05D006015 ORTHO05D007816 4.3e-171 604.7 334 79.9
Cfa014228 Carpinus fangiana HOM05D006015 ORTHO05D007816 5.6e-171 604.4 336 79.8
Duzib211G0350 Durio zibethinus HOM05D006015 ORTHO05D007816 7.3e-171 604.0 343 77.0
Cc08_g02360 Coffea canephora HOM05D006015 ORTHO05D007816 1.2e-170 603.2 338 77.5
ECA236G0403 Erigeron canadensis HOM05D006015 ORTHO05D007816 1.2e-170 603.2 339 78.5
PGR083G2314 Punica granatum HOM05D006015 ORTHO05D007816 2.1e-170 602.4 340 78.8
Gorai.001G221700 Gossypium raimondii HOM05D006015 ORTHO05D007816 4.7e-170 601.3 335 79.1
CiPaw.04G196900 Carya illinoinensis HOM05D006015 ORTHO05D007816 6.2e-170 600.9 336 79.5
Lsat_1_v5_gn_7_96920 Lactuca sativa HOM05D006015 ORTHO05D007816 1.1e-169 600.1 340 76.8
Lj6g0021297 Lotus japonicus HOM05D006015 ORTHO05D007816 1.8e-169 599.4 344 76.5
Dinv26607 Davidia involucrata HOM05D006015 ORTHO05D007816 2.3e-169 599.0 342 76.6
Gohir.D07G198100 Gossypium hirsutum HOM05D006015 ORTHO05D007816 4.0e-169 598.2 335 78.8
VMungo0720G1520 Vigna mungo HOM05D006015 ORTHO05D007816 4.0e-169 598.2 336 77.7
MSTRG.10825 Avicennia marina HOM05D006015 ORTHO05D007816 2.0e-168 595.9 336 78.0
HanXRQChr11g0329021 Helianthus annuus HOM05D006015 ORTHO05D007816 2.0e-168 595.9 339 76.7
MD09G1126500 Malus domestica HOM05D006015 ORTHO05D007816 2.6e-168 595.5 336 77.1
Peaxi162Scf00802g00022 Petunia axillaris HOM05D006015 ORTHO05D007816 4.4e-168 594.7 334 77.8
Nitab4.5_0001701g0190 Nicotiana tabacum HOM05D006015 ORTHO05D007816 5.8e-168 594.3 334 79.0
Sopen07g024010 Solanum pennellii HOM05D006015 ORTHO05D007816 5.8e-168 594.3 334 78.7
Ca_25000_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 7.5e-168 594.0 344 76.7
Ca_30801_v3 Cicer arietinum L. HOM05D006015 ORTHO05D007816 7.5e-168 594.0 344 76.7
Glyma.10G128800 Glycine max HOM05D006015 ORTHO05D007816 1.3e-167 593.2 344 76.2
MD17G1116800 Malus domestica HOM05D006015 ORTHO05D007816 1.7e-167 592.8 336 76.5
Potri.014G167200 Populus trichocarpa HOM05D006015 ORTHO05D007816 2.9e-167 592.0 340 78.2
Sabra14G0127200 Salix brachista HOM05D006015 ORTHO05D007816 3.7e-167 591.7 333 79.0
Psat6g109000 Pisum sativum HOM05D006015 ORTHO05D007816 6.4e-167 590.9 345 76.2
Medtr1g046210 Medicago truncatula HOM05D006015 ORTHO05D007816 8.3e-167 590.5 336 76.5
Nn3g19725 Nelumbo nucifera HOM05D006015 ORTHO05D007816 8.3e-167 590.5 342 75.1
Phvul.007G239000 Phaseolus vulgaris HOM05D006015 ORTHO05D007816 8.3e-167 590.5 344 75.3
Solyc07g045470.3 Solanum lycopersicum HOM05D006015 ORTHO05D007816 8.3e-167 590.5 334 77.8
Hma1.2p1_0545F.1_g175930 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 1.1e-166 590.1 335 77.6
PGSC0003DMG400017397 Solanum tuberosum HOM05D006015 ORTHO05D007816 1.1e-166 590.1 334 78.4
TPR.G23976 Trifolium pratense HOM05D006015 ORTHO05D007816 4.1e-166 588.2 344 75.3
Cpa.g.sc136.28 Carica papaya HOM05D006015 ORTHO05D007816 5.4e-166 587.8 335 76.4
TAR629G2010 Trochodendron aralioides HOM05D006015 ORTHO05D007816 7.1e-166 587.4 338 76.6
Nitab4.5_0001867g0080 Nicotiana tabacum HOM05D006015 ORTHO05D007816 1.6e-165 586.3 334 77.5
Eucgr.H00879 Eucalyptus grandis HOM05D006015 ORTHO05D007816 2.1e-165 585.9 333 77.2
Sp3g23770 Schrenkiella parvula HOM05D006015 ORTHO05D007816 2.7e-165 585.5 342 74.6
THA.LOC104808847 Tarenaya hassleriana HOM05D006015 ORTHO05D007816 2.7e-165 585.5 336 76.2
Aqoxy1G04250 Aquilegia oxysepala HOM05D006015 ORTHO05D007816 3.5e-165 585.1 339 75.5
Sc21g0000520 Simmondsia chinensis HOM05D006015 ORTHO05D007816 3.5e-165 585.1 334 76.9
CAN.G177.8 Capsicum annuum HOM05D006015 ORTHO05D007816 6.0e-165 584.3 334 77.2
Carub.0003s2938 Capsella rubella HOM05D006015 ORTHO05D007816 1.7e-164 582.8 338 76.3
Lalb_Chr03g0036841 Lupinus albus HOM05D006015 ORTHO05D007816 1.7e-164 582.8 343 76.4
CANSAT64G2535 Cannabis sativa HOM05D006015 ORTHO05D007816 2.3e-164 582.4 333 77.5
Lalb_Chr01g0011281 Lupinus albus HOM05D006015 ORTHO05D007816 2.3e-164 582.4 343 76.1
AUR62029116 Chenopodium quinoa HOM05D006015 ORTHO05D007816 3.9e-164 581.6 335 76.1
Manes.12G065800 Manihot esculenta HOM05D006015 ORTHO05D007816 6.6e-164 580.9 343 75.8
Thhalv10002538m.g Eutrema salsugineum HOM05D006015 ORTHO05D007816 8.6e-164 580.5 338 75.7
FAN09G3933 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.1e-163 580.1 335 74.9
PSO302G0043 Papaver somniferum HOM05D006015 ORTHO05D007816 1.1e-163 580.1 337 75.4
Atru.chr6.3393 Acer truncatum HOM05D006015 ORTHO05D007816 1.5e-163 579.7 336 75.6
ATR0827G116 Amborella trichopoda HOM05D006015 ORTHO05D007816 1.5e-163 579.7 341 74.8
AT2G05320 Arabidopsis thaliana HOM05D006015 ORTHO05D007816 1.9e-163 579.3 342 75.4
FAN02G2834 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.9e-163 579.3 335 74.6
Ciclev10015287m.g Citrus clementina HOM05D006015 ORTHO05D007816 5.6e-163 577.8 335 76.1
TWI18G0302 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 5.6e-163 577.8 335 77.6
FAN14G1195 Fragaria x ananassa HOM05D006015 ORTHO05D007816 9.5e-163 577.0 335 74.3
TWI75G1720 Tripterygium wilfordii HOM05D006015 ORTHO05D007816 9.5e-163 577.0 335 77.3
FvH4_6g40640 Fragaria vesca HOM05D006015 ORTHO05D007816 2.1e-162 575.9 335 74.0
AL3G42830 Arabidopsis lyrata HOM05D006015 ORTHO05D007816 4.7e-162 574.7 338 75.4
BcaB08g34500 Brassica carinata HOM05D006015 ORTHO05D007816 6.2e-162 574.3 339 75.5
BcaC01g03165 Brassica carinata HOM05D006015 ORTHO05D007816 6.2e-162 574.3 339 75.8
RcHm_v2.0_Chr2g0156011 Rosa chinensis HOM05D006015 ORTHO05D007816 8.1e-162 573.9 335 73.7
A03p44610 Brassica napus HOM05D006015 ORTHO05D007816 1.1e-161 573.5 339 76.1
BraA03t13594Z Brassica rapa HOM05D006015 ORTHO05D007816 1.1e-161 573.5 339 76.1
PSO210G7679 Papaver somniferum HOM05D006015 ORTHO05D007816 1.1e-161 573.5 337 74.5
CARHR103100 Cardamine hirsuta HOM05D006015 ORTHO05D007816 1.4e-161 573.2 339 74.9
FAN05G5154 Fragaria x ananassa HOM05D006015 ORTHO05D007816 1.4e-161 573.2 335 74.0
MSTRG.6445 Avicennia marina HOM05D006015 ORTHO05D007816 2.3e-161 572.4 334 77.2
Atru.BG.41.p Acer truncatum HOM05D006015 ORTHO05D007816 3.1e-161 572.0 334 74.9
BolC3t17819H Brassica oleracea HOM05D006015 ORTHO05D007816 3.1e-161 572.0 339 75.5
MELO3C024194.2 Cucumis melo HOM05D006015 ORTHO05D007816 6.8e-161 570.9 336 75.0
Sed0014474 Sechium edule HOM05D006015 ORTHO05D007816 8.9e-161 570.5 336 75.3
C03p55440 Brassica napus HOM05D006015 ORTHO05D007816 1.2e-160 570.1 339 75.2
CsaV3_7G002510 Cucumis sativus L. HOM05D006015 ORTHO05D007816 2.6e-160 568.9 338 74.6
Ah.01g002640 Amaranthus hybridus HOM05D006015 ORTHO05D007816 2.9e-159 565.5 335 74.3
ClCG02G002870 Citrullus lanatus HOM05D006015 ORTHO05D007816 2.9e-159 565.5 343 73.5
Aa31LG8G11520 Aethionema arabicum HOM05D006015 ORTHO05D007816 6.4e-159 564.3 335 74.6
SGA_v2.0_scaffold94G28455 Striga asiatica HOM05D003478 ORTHO05D004196 1.9e-158 562.8 336 75.6
MBI16_g07770_MAGBIO Magnolia biondii HOM05D006015 ORTHO05D007816 2.4e-158 562.4 335 74.9
Actinidia07868 Actinidia chinensis HOM05D006015 ORTHO05D007816 3.5e-157 558.5 342 74.9
unitig_37.g12711 Utricularia gibba HOM05D006015 ORTHO05D007816 6.0e-157 557.8 339 72.0
HPP92_001839 Vanilla planifolia HOM05D006015 ORTHO05D007816 7.8e-157 557.4 337 72.1
Gohir.A07G191800 Gossypium hirsutum HOM05D006015 ORTHO05D007816 3.9e-156 555.1 335 75.2
Sed0012767 Sechium edule HOM05D006015 ORTHO05D007816 5.1e-156 554.7 336 73.8
Os02g0798100 Oryza sativa ssp. japonica HOM05D006015 ORTHO05D007816 2.8e-154 548.9 341 69.5
Migut.J01779 Erythranthe guttata HOM05D006015 ORTHO05D007816 1.1e-153 547.0 339 71.7
Zm00001eb192260 Zea mays HOM05D006015 ORTHO05D007816 6.4e-151 537.7 340 68.2
AUR62015007 Chenopodium quinoa HOM05D006015 ORTHO05D007816 7.1e-150 534.3 313 75.4
CDE05G3376 Ceratophyllum demersum HOM05D006015 ORTHO05D007816 1.2e-149 533.5 333 72.1
SEGI_05803 Sequoiadendron giganteum HOM05D006015 ORTHO05D007816 5.6e-147 524.6 338 69.5
Nn1g02851 Nelumbo nucifera HOM05D006015 ORTHO05D007816 7.3e-147 524.2 338 68.9
SHI10157 Sapria himalayana HOM05D006015 ORTHO05D007816 6.9e-145 517.7 335 68.1
Prupe.3G198000 Prunus persica HOM05D006015 ORTHO05D007816 4.9e-143 511.5 283 78.1
Glyma.20G080200 Glycine max HOM05D006015 ORTHO05D007816 1.9e-142 509.6 289 76.5
Actinidia18833 Actinidia chinensis HOM05D006015 ORTHO05D007816 1.9e-139 499.6 337 67.7
Pp3c8_6700 Physcomitrium patens HOM05D006015 ORTHO05D007816 1.6e-130 469.9 336 61.3
Pp3c12_25130 Physcomitrium patens HOM05D006015 ORTHO05D007816 2.8e-130 469.2 336 61.6
SMO358G0350 Selaginella moellendorffii HOM05D006015 ORTHO05D007816 6.5e-127 458.0 341 59.2
Mapoly0086s0006 Marchantia polymorpha HOM05D006015 ORTHO05D007816 1.5e-123 446.8 343 61.2
SalBow1G4868 Salvia bowleyana HOM05D006015 ORTHO05D007816 1.1e-115 420.6 319 62.7
MSTRG.26113 Avicennia marina HOM05D006015 ORTHO05D007816 4.5e-104 382.1 211 78.2
Hma1.2p1_0545F.1_g175940 Hydrangea macrophylla HOM05D006015 ORTHO05D007816 2.9e-103 379.4 210 79.0
SalBow6G1876 Salvia bowleyana HOM05D006015 ORTHO05D007816 5.5e-102 375.2 215 75.3
CBR_g52107 Chara braunii HOM05D006015 ORTHO05D000002 8.0e-93 344.7 278 56.1
AagrBONN_evm.TU.Sc2ySwM_368.1590 Anthoceros agrestis HOM05D006015 ORTHO05D007816 2.4e-89 333.2 342 49.1
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 7.3e-54 215.3 172 61.6
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 3.9e-47 193.0 314 39.5
Nn5g28971 Nelumbo nucifera HOM05D006015 ORTHO05D007816 3.5e-32 143.3 101 57.4
EL10Ac8g18725 Beta vulgaris HOM05D006015 ORTHO05D007816 4.9e-26 122.9 80 65.0
Actinidia35205 Actinidia chinensis HOM05D001060 ORTHO05D000905 2.7e-24 117.1 198 33.3
Aa31LG8G11540 Aethionema arabicum HOM05D006015 ORTHO05D007816 4.2e-09 66.6 99 39.4
Aa31LG8G11530 Aethionema arabicum HOM05D006015 ORTHO05D059074 4.3e-06 56.6 74 44.6
CSS0018959 Camellia sinensis var. sinensis HOM05D006015 ORTHO05D112597 5.7e-06 56.2 77 41.6


User provided reference genes

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