Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P796T11 Lonicera japonica HOM05D005849 ORTHO05D004704 4.4e-59 231.1 117 100.0
Lj8P136T22 Lonicera japonica HOM05D005849 ORTHO05D004704 2.5e-22 109.0 129 58.9
Dinv26604 Davidia involucrata HOM05D005849 ORTHO05D004704 5.2e-20 101.3 128 52.3
Nn1g03187 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.2e-19 100.1 124 53.2
Thecc.01G196200 Theobroma cacao HOM05D005849 ORTHO05D004704 5.8e-19 97.8 131 51.9
Rhsim06G0176600 Rhododendron simsii HOM05D005849 ORTHO05D004704 2.2e-18 95.9 116 54.3
Duzib133G0645 Durio zibethinus HOM05D005849 ORTHO05D004704 1.4e-17 93.2 125 48.0
Nn1g07503 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.4e-17 93.2 124 51.6
TAR629G2911 Trochodendron aralioides HOM05D005849 ORTHO05D004704 1.4e-17 93.2 108 57.4
Cc03_g07410 Coffea canephora HOM05D005849 ORTHO05D004704 3.2e-17 92.0 127 52.0
Aqoxy4G02338 Aquilegia oxysepala HOM05D005849 ORTHO05D004704 1.2e-16 90.1 137 43.8
Sabra14G0127500 Salix brachista HOM05D005849 ORTHO05D004704 1.6e-16 89.7 133 48.9
TAR629G2787 Trochodendron aralioides HOM05D005849 ORTHO05D004704 2.1e-16 89.4 113 55.8
Duzib138G1177 Durio zibethinus HOM05D005849 ORTHO05D004704 6.0e-16 87.8 127 48.0
Potri.014G167700 Populus trichocarpa HOM05D005849 ORTHO05D004704 7.8e-16 87.4 119 50.4
COL.COLO4_19617 Corchorus olitorius HOM05D005849 ORTHO05D004704 1.0e-15 87.0 135 45.2
Prupe.3G197400 Prunus persica HOM05D005849 ORTHO05D004704 1.5e-14 83.2 122 46.7
TWI18G0644 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 1.5e-14 83.2 132 47.7
Gohir.A07G192100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.5e-14 82.4 129 47.3
Gorai.001G222200 Gossypium raimondii HOM05D005849 ORTHO05D004704 2.5e-14 82.4 129 47.3
Manes.12G064702 Manihot esculenta HOM05D005849 ORTHO05D004704 4.3e-14 81.6 111 51.4
Manes.13G061900 Manihot esculenta HOM05D005849 ORTHO05D004704 4.3e-14 81.6 111 51.4
Actinidia07866 Actinidia chinensis HOM05D005849 ORTHO05D004704 5.6e-14 81.3 107 56.1
DCAR_012893 Daucus carota HOM05D005849 ORTHO05D004704 7.3e-14 80.9 130 46.2
Gohir.D07G198400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 7.3e-14 80.9 129 46.5
TWI36G1699 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 7.3e-14 80.9 127 50.4
QL04p068477 Quercus lobata HOM05D005849 ORTHO05D004704 3.6e-13 78.6 124 49.2
Nitab4.5_0000006g0660 Nicotiana tabacum HOM05D005849 ORTHO05D004704 6.2e-13 77.8 130 43.8
PSO541G2883 Papaver somniferum HOM05D005849 ORTHO05D004704 1.4e-12 76.6 157 40.8
Gohir.A07G169800 Gossypium hirsutum HOM05D005849 ORTHO05D004704 1.8e-12 76.3 127 46.5
PSO675G3647 Papaver somniferum HOM05D005849 ORTHO05D004704 3.1e-12 75.5 156 41.0
PGR083G2364 Punica granatum HOM05D005849 ORTHO05D004704 3.1e-12 75.5 131 45.8
MD17G1117100 Malus domestica HOM05D005849 ORTHO05D004704 4.0e-12 75.1 119 47.1
CsaV3_6G009640 Cucumis sativus L. HOM05D005849 ORTHO05D004704 5.2e-12 74.7 123 47.2
Gorai.001G191400 Gossypium raimondii HOM05D005849 ORTHO05D004704 5.2e-12 74.7 127 44.9
RcHm_v2.0_Chr2g0155981 Rosa chinensis HOM05D005849 ORTHO05D004704 6.8e-12 74.3 123 46.3
MD09G1126800 Malus domestica HOM05D005849 ORTHO05D004704 8.9e-12 73.9 123 45.5
MELO3C025957.2 Cucumis melo HOM05D005849 ORTHO05D004704 1.2e-11 73.6 127 44.1
CiPaw.04G197000 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.5e-11 73.2 136 47.1
Lsat_1_v5_gn_9_103781 Lactuca sativa HOM05D005849 ORTHO05D004704 1.5e-11 73.2 120 46.7
Gohir.D07G171100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 2.0e-11 72.8 128 44.5
FAN05G2424 Fragaria x ananassa HOM05D005849 ORTHO05D004704 3.4e-11 72.0 123 45.5
FvH4_6g40610 Fragaria vesca HOM05D005849 ORTHO05D004704 4.4e-11 71.6 123 45.5
FAN09G2506 Fragaria x ananassa HOM05D005849 ORTHO05D004704 4.4e-11 71.6 123 45.5
FAN14G3262 Fragaria x ananassa HOM05D005849 ORTHO05D004704 4.4e-11 71.6 123 45.5
Prupe.4G242400 Prunus persica HOM05D005849 ORTHO05D004704 5.8e-11 71.2 114 45.6
Sed0027972 Sechium edule HOM05D005849 ORTHO05D004704 5.8e-11 71.2 107 46.7
Actinidia18832 Actinidia chinensis HOM05D005849 ORTHO05D004704 7.5e-11 70.9 126 46.8
Psat5g104280 Pisum sativum HOM05D005849 ORTHO05D004704 7.5e-11 70.9 69 63.8
CiPaw.03G281900 Carya illinoinensis HOM05D005849 ORTHO05D004704 1.3e-10 70.1 123 46.3
Sed0012118 Sechium edule HOM05D005849 ORTHO05D004704 1.7e-10 69.7 133 42.1
Oeu064351.1 Olea europaea HOM05D005849 ORTHO05D004704 2.2e-10 69.3 113 49.6
TPR.G11064 Trifolium pratense HOM05D005849 ORTHO05D004704 2.2e-10 69.3 69 62.3
FAN02G2959 Fragaria x ananassa HOM05D005849 ORTHO05D004704 2.9e-10 68.9 123 43.9
Ca_06483_v3 Cicer arietinum L. HOM05D005849 ORTHO05D004704 4.9e-10 68.2 111 51.4
Solyc07g045450.1 Solanum lycopersicum HOM05D005849 ORTHO05D004704 6.4e-10 67.8 123 44.7
Sopen07g023990 Solanum pennellii HOM05D005849 ORTHO05D004704 6.4e-10 67.8 123 44.7
TPR.G35904 Trifolium pratense HOM05D005849 ORTHO05D004704 8.3e-10 67.4 104 47.1
Cpa.g.sc136.30 Carica papaya HOM05D005849 ORTHO05D004704 1.1e-09 67.0 132 42.4
MBI19_g14891_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 1.1e-09 67.0 107 48.6
Medtr3g082780 Medicago truncatula HOM05D005849 ORTHO05D004704 2.4e-09 65.9 73 54.8
Ciclev10018021m.g Citrus clementina HOM05D005849 ORTHO05D004704 3.2e-09 65.5 120 49.2
Duzib213G0789 Durio zibethinus HOM05D005849 ORTHO05D004704 3.2e-09 65.5 118 45.8
ECA240G3450 Erigeron canadensis HOM05D005849 ORTHO05D004704 3.2e-09 65.5 118 46.6
Psat2g002880 Pisum sativum HOM05D005849 ORTHO05D004704 3.2e-09 65.5 113 46.9
AUR62015005 Chenopodium quinoa HOM05D005849 ORTHO05D004704 7.1e-09 64.3 125 40.8
AUR62029117 Chenopodium quinoa HOM05D005849 ORTHO05D004704 7.1e-09 64.3 126 41.3
Cfa014225 Carpinus fangiana HOM05D005849 ORTHO05D004704 9.2e-09 63.9 126 42.1
Haze_12628 Corylus avellana HOM05D005849 ORTHO05D004704 9.2e-09 63.9 126 42.1
Glyma.13G006500 Glycine max HOM05D005849 ORTHO05D004704 1.2e-08 63.5 98 51.0
Medtr5g098480 Medicago truncatula HOM05D005849 ORTHO05D004704 1.2e-08 63.5 121 46.3
Sabra16G0240400 Salix brachista HOM05D005849 ORTHO05D004704 1.2e-08 63.5 126 40.5
VMungo0540G2501 Vigna mungo HOM05D005849 ORTHO05D004704 2.1e-08 62.8 78 56.4
MSTRG.12249 Avicennia marina HOM05D005849 ORTHO05D004704 2.7e-08 62.4 112 44.6
EL10Ac9g22679 Beta vulgaris HOM05D005849 ORTHO05D004704 2.7e-08 62.4 116 44.8
LjContig00081g0015024 Lotus japonicus HOM05D005849 ORTHO05D004704 3.5e-08 62.0 127 40.2
CANSAT11G2057 Cannabis sativa HOM05D005849 ORTHO05D004704 6.0e-08 61.2 122 42.6
Lsat_1_v5_gn_5_122020 Lactuca sativa HOM05D005849 ORTHO05D004704 6.0e-08 61.2 105 43.8
Manes.03G140566 Manihot esculenta HOM05D005849 ORTHO05D004704 6.0e-08 61.2 121 39.7
Nn1g04368 Nelumbo nucifera HOM05D005849 ORTHO05D004704 1.0e-07 60.5 99 45.5
Lalb_Chr10g0107651 Lupinus albus HOM05D005849 ORTHO05D004704 1.3e-07 60.1 114 44.7
Manes.03G140700 Manihot esculenta HOM05D005849 ORTHO05D004704 1.3e-07 60.1 121 38.8
Ah.01g002540 Amaranthus hybridus HOM05D005849 ORTHO05D004704 1.7e-07 59.7 112 39.3
MBI16_g22138_MAGBIO Magnolia biondii HOM05D005849 ORTHO05D004704 1.7e-07 59.7 121 43.0
TWI38G0138 Tripterygium wilfordii HOM05D005849 ORTHO05D004704 1.7e-07 59.7 114 38.6
Gohir.A01G091100 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.0e-07 58.9 117 40.2
ATR0827G126 Amborella trichopoda HOM05D005849 ORTHO05D004704 5.1e-07 58.2 70 48.6
Glyma.20G062100 Glycine max HOM05D005849 ORTHO05D004704 5.1e-07 58.2 107 45.8
Thecc.07G014700 Theobroma cacao HOM05D005849 ORTHO05D004704 5.1e-07 58.2 146 34.2
DCAR_019680 Daucus carota HOM05D005849 ORTHO05D004704 6.6e-07 57.8 118 44.1
Phvul.007G121090 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 8.6e-07 57.4 99 46.5
Sp7g06260 Schrenkiella parvula HOM05D009495 ORTHO05D004704 8.6e-07 57.4 114 39.5
Sc20g0004000 Simmondsia chinensis HOM05D005849 ORTHO05D004704 1.1e-06 57.0 111 43.2
THA.LOC104808845 Tarenaya hassleriana HOM05D005849 ORTHO05D004704 1.1e-06 57.0 105 41.0
Phvul.008G278800 Phaseolus vulgaris HOM05D014115 ORTHO05D004704 1.9e-06 56.2 70 51.4
Dinv21298 Davidia involucrata HOM05D005849 ORTHO05D004704 2.5e-06 55.8 104 44.2
Gohir.D01G076400 Gossypium hirsutum HOM05D005849 ORTHO05D004704 3.3e-06 55.5 90 46.7
AL3G42130 Arabidopsis lyrata HOM05D009495 ORTHO05D004704 4.3e-06 55.1 74 48.6
Carub.0003s2613 Capsella rubella HOM05D009495 ORTHO05D004704 5.6e-06 54.7 73 47.9
CiPaw.11G203200 Carya illinoinensis HOM05D005849 ORTHO05D004704 5.6e-06 54.7 120 39.2
Potri.001G367100 Populus trichocarpa HOM05D005849 ORTHO05D004704 5.6e-06 54.7 117 37.6
Actinidia35203 Actinidia chinensis HOM05D005849 ORTHO05D004704 7.3e-06 54.3 119 40.3
AT2G04480 Arabidopsis thaliana HOM05D009495 ORTHO05D004704 7.3e-06 54.3 75 50.7
Dinv10326 Davidia involucrata HOM05D005849 ORTHO05D004704 9.5e-06 53.9 114 40.4
Phvul.006G056700 Phaseolus vulgaris HOM05D005849 ORTHO05D004704 9.5e-06 53.9 88 44.3
Sp3g23270 Schrenkiella parvula HOM05D009495 ORTHO05D004704 9.5e-06 53.9 78 47.4


User provided reference genes

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