Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P786T11 Lonicera japonica HOM05D000645 ORTHO05D000494 1.2e-35 152.9 90 100.0
Dinv04325 Davidia involucrata HOM05D000645 ORTHO05D000494 2.6e-19 98.6 90 72.2
CSS0031633 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 1.8e-12 75.9 94 64.9
CANSAT56G4354 Cannabis sativa HOM05D000645 ORTHO05D000494 2.4e-12 75.5 90 56.7
CSS0012977 Camellia sinensis var. sinensis HOM05D000645 ORTHO05D000494 2.0e-11 72.4 92 64.1
Solyc07g063330.4 Solanum lycopersicum HOM05D000645 ORTHO05D000494 2.0e-11 72.4 94 45.7
Lsat_1_v5_gn_7_105380 Lactuca sativa HOM05D000645 ORTHO05D000494 2.6e-11 72.0 90 55.6
Lj1A848T61 Lonicera japonica HOM05D000645 ORTHO05D000494 2.6e-11 72.0 93 62.4
Sopen07g031500 Solanum pennellii HOM05D000645 ORTHO05D000494 4.4e-11 71.2 94 44.7
PGSC0003DMG401012456 Solanum tuberosum HOM05D000645 ORTHO05D000494 4.4e-11 71.2 94 44.7
GSVIVG01014389001 Vitis vinifera HOM05D000645 ORTHO05D000494 4.4e-11 71.2 90 58.9
Nitab4.5_0000207g0210 Nicotiana tabacum HOM05D000645 ORTHO05D000494 5.8e-11 70.9 83 48.2
QL08p019707 Quercus lobata HOM05D000645 ORTHO05D000494 7.6e-11 70.5 92 60.9
Cc05_g12380 Coffea canephora HOM05D000645 ORTHO05D000494 9.9e-11 70.1 96 58.3
Nitab4.5_0009340g0010 Nicotiana tabacum HOM05D000645 ORTHO05D000494 9.9e-11 70.1 95 46.3
Nitab4.5_0022454g0010 Nicotiana tabacum HOM05D000645 ORTHO05D000494 1.3e-10 69.7 88 59.1
Nitab4.5_0003769g0110 Nicotiana tabacum HOM05D000645 ORTHO05D000494 3.8e-10 68.2 92 46.7
Ciclev10007384m.g Citrus clementina HOM05D000645 ORTHO05D000494 8.4e-10 67.0 91 49.5
MELO3C016715.2 Cucumis melo HOM05D000645 ORTHO05D000494 1.9e-09 65.9 90 44.4
CsaV3_4G033890 Cucumis sativus L. HOM05D000645 ORTHO05D000494 1.9e-09 65.9 90 44.4
MSTRG.14367 Avicennia marina HOM05D000645 ORTHO05D000494 3.2e-09 65.1 93 51.6
CiPaw.11G173500 Carya illinoinensis HOM05D000645 ORTHO05D000494 7.1e-09 63.9 90 56.7
unitig_0.g2261 Utricularia gibba HOM05D000645 ORTHO05D000494 9.3e-09 63.5 88 51.1
Oeu019347.3 Olea europaea HOM05D000645 ORTHO05D000494 1.2e-08 63.2 94 50.0
Lsat_1_v5_gn_5_6560 Lactuca sativa HOM05D000645 ORTHO05D000494 1.6e-08 62.8 97 56.7
Haze_09480 Corylus avellana HOM05D000645 ORTHO05D000494 3.5e-08 61.6 91 57.1
Haze_09484 Corylus avellana HOM05D000645 ORTHO05D000494 3.5e-08 61.6 91 57.1
Hma1.2p1_0540F.1_g174640 Hydrangea macrophylla HOM05D000645 ORTHO05D000494 3.5e-08 61.6 93 60.2
ClCG11G018230 Citrullus lanatus HOM05D000645 ORTHO05D000494 6.0e-08 60.8 90 50.0
Actinidia09988 Actinidia chinensis HOM05D000645 ORTHO05D000494 7.8e-08 60.5 92 56.5
Nn1g06632 Nelumbo nucifera HOM05D000645 ORTHO05D000494 7.8e-08 60.5 90 60.0
Oeu011676.2 Olea europaea HOM05D000645 ORTHO05D000494 1.7e-07 59.3 94 53.2
Prupe.4G185800 Prunus persica HOM05D000645 ORTHO05D000494 3.0e-07 58.5 89 58.4
Eucgr.F01096 Eucalyptus grandis HOM05D000645 ORTHO05D000494 6.6e-07 57.4 86 43.0
HanXRQChr05g0156721 Helianthus annuus HOM05D000645 ORTHO05D000494 6.6e-07 57.4 94 54.3
Peaxi162Scf00998g00006 Petunia axillaris HOM05D000645 ORTHO05D000494 6.6e-07 57.4 90 42.2
PGSC0003DMG400025006 Solanum tuberosum HOM05D000645 ORTHO05D000494 6.6e-07 57.4 94 39.4
DCAR_020981 Daucus carota HOM05D000645 ORTHO05D000494 1.1e-06 56.6 93 49.5
ECA246G4741 Erigeron canadensis HOM05D000645 ORTHO05D000494 1.1e-06 56.6 91 38.5
Aa31LG3G10170 Aethionema arabicum HOM05D000645 ORTHO05D002822 2.5e-06 55.5 88 37.5
Sopen10g002800 Solanum pennellii HOM05D000645 ORTHO05D000494 2.5e-06 55.5 89 36.0
MD03G1223700 Malus domestica HOM05D000645 ORTHO05D000494 3.3e-06 55.1 89 49.4
SGA_v2.0_scaffold9G04938 Striga asiatica HOM05D000645 ORTHO05D000494 3.3e-06 55.1 43 60.5
MD11G1241600 Malus domestica HOM05D000645 ORTHO05D000494 5.6e-06 54.3 90 53.3
SalBow7G0924 Salvia bowleyana HOM05D000645 ORTHO05D000494 5.6e-06 54.3 90 52.2
unitig_749.g13523 Utricularia gibba HOM05D000645 ORTHO05D000494 5.6e-06 54.3 88 43.2
PSO832G3295 Papaver somniferum HOM05D000645 ORTHO05D000494 7.3e-06 53.9 53 54.7
unitig_26.g9537 Utricularia gibba HOM05D000645 ORTHO05D000494 7.3e-06 53.9 85 38.8
MSTRG.12920 Avicennia marina HOM05D000645 ORTHO05D000494 9.6e-06 53.5 89 41.6
Oeu030443.1 Olea europaea HOM05D000645 ORTHO05D002822 9.6e-06 53.5 43 58.1
Oeu030444.1 Olea europaea HOM05D000645 ORTHO05D000494 9.6e-06 53.5 43 58.1
Oeu030445.1 Olea europaea HOM05D000645 ORTHO05D000494 9.6e-06 53.5 43 58.1
Oeu030446.3 Olea europaea HOM05D000645 ORTHO05D000494 9.6e-06 53.5 43 58.1


User provided reference genes

Program Settings