Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P690T28 Lonicera japonica HOM05D007320 ORTHO05D009290 1.1e-163 580.1 344 100.0
Dinv15897 Davidia involucrata HOM05D007320 ORTHO05D009290 5.3e-113 411.8 344 73.3
CSS0012636 Camellia sinensis var. sinensis HOM05D007320 ORTHO05D009290 3.1e-105 386.0 344 70.3
Prupe.3G125800 Prunus persica HOM05D007320 ORTHO05D009290 1.5e-104 383.6 344 70.1
Rhsim06G0135200 Rhododendron simsii HOM05D007320 ORTHO05D009290 4.5e-104 382.1 344 68.0
CAN.G756.7 Capsicum annuum HOM05D007320 ORTHO05D009290 2.9e-103 379.4 316 62.0
Actinidia11122 Actinidia chinensis HOM05D007320 ORTHO05D009290 5.0e-103 378.6 344 59.0
GSVIVG01020656001 Vitis vinifera HOM05D007320 ORTHO05D009290 8.5e-103 377.9 344 66.3
Atru.chr6.2840 Acer truncatum HOM05D007320 ORTHO05D009290 1.4e-102 377.1 344 59.0
vmacro12358 Vaccinium macrocarpon HOM05D007320 ORTHO05D009290 7.2e-102 374.8 344 66.6
Dinv19981 Davidia involucrata HOM05D007320 ORTHO05D009290 9.4e-102 374.4 306 76.1
Hma1.2p1_0002F.1_g002500 Hydrangea macrophylla HOM05D007320 ORTHO05D009290 1.2e-101 374.0 347 68.9
Sopen01g035350 Solanum pennellii HOM05D007320 ORTHO05D009290 7.9e-101 371.3 342 56.7
Ciclev10017507m.g Citrus clementina HOM05D007320 ORTHO05D009290 1.0e-100 370.9 344 56.1
PGSC0003DMG400001712 Solanum tuberosum HOM05D007320 ORTHO05D009290 3.9e-100 369.0 329 58.1
Solyc01g088490.3 Solanum lycopersicum HOM05D007320 ORTHO05D009290 5.1e-100 368.6 342 56.4
Nitab4.5_0001895g0020 Nicotiana tabacum HOM05D007320 ORTHO05D009290 3.3e-99 365.9 299 61.9
CiPaw.04G130300 Carya illinoinensis HOM05D007320 ORTHO05D009290 6.3e-98 361.7 344 56.7
Manes.13G139600 Manihot esculenta HOM05D007320 ORTHO05D009290 4.1e-97 359.0 345 58.6
Haze_13306 Corylus avellana HOM05D007320 ORTHO05D009290 5.3e-97 358.6 330 66.4
TWI59G0750 Tripterygium wilfordii HOM05D007320 ORTHO05D009290 5.3e-97 358.6 344 55.5
Lalb_Chr25g0279081 Lupinus albus HOM05D007320 ORTHO05D009290 7.0e-97 358.2 344 60.8
CANSAT64G2476 Cannabis sativa HOM05D007320 ORTHO05D009290 9.1e-97 357.8 346 64.2
DCAR_013053 Daucus carota HOM05D007320 ORTHO05D009290 1.2e-96 357.5 328 67.4
Nitab4.5_0008210g0010 Nicotiana tabacum HOM05D007320 ORTHO05D009290 2.0e-96 356.7 309 60.2
Cfa014690 Carpinus fangiana HOM05D007320 ORTHO05D009290 2.6e-96 356.3 334 65.0
MD09G1241100 Malus domestica HOM05D007320 ORTHO05D009290 5.9e-96 355.1 341 66.3
Medtr2g090885 Medicago truncatula HOM05D007320 ORTHO05D009290 7.7e-96 354.8 335 63.6
Ca_01474_v3 Cicer arietinum L. HOM05D007320 ORTHO05D009290 1.7e-95 353.6 316 62.0
Oeu000571.1 Olea europaea HOM05D007320 ORTHO05D009290 1.7e-95 353.6 344 61.9
Cc05_g07980 Coffea canephora HOM05D007320 ORTHO05D009290 6.5e-95 351.7 344 55.2
FvH4_7g08410 Fragaria vesca HOM05D007320 ORTHO05D009290 9.4e-94 347.8 344 61.6
FAN10G1335 Fragaria x ananassa HOM05D007320 ORTHO05D009290 1.2e-93 347.4 344 61.3
FAN10G4046 Fragaria x ananassa HOM05D007320 ORTHO05D009290 8.0e-93 344.7 344 61.3
TAR627G0001 Trochodendron aralioides HOM05D007320 ORTHO05D009290 4.0e-92 342.4 350 66.3
FAN03G0990 Fragaria x ananassa HOM05D007320 ORTHO05D009290 5.2e-92 342.0 342 60.8
RcHm_v2.0_Chr0c20g0500221 Rosa chinensis HOM05D007320 ORTHO05D009290 8.8e-92 341.3 344 58.1
Sabra13G0103100 Salix brachista HOM05D007320 ORTHO05D009290 2.2e-90 336.7 344 61.6
Lj3g0010689 Lotus japonicus HOM05D007320 ORTHO05D009290 2.8e-90 336.3 333 61.9
Glyma.12G208100 Glycine max HOM05D007320 ORTHO05D009290 3.7e-90 335.9 344 52.3
TPR.G6440 Trifolium pratense HOM05D007320 ORTHO05D009290 8.2e-90 334.7 336 64.6
HanXRQChr17g0565321 Helianthus annuus HOM05D007320 ORTHO05D009290 1.8e-89 333.6 346 52.3
Potri.013G124100 Populus trichocarpa HOM05D007320 ORTHO05D009290 4.5e-88 328.9 339 61.7
ECA234G2345 Erigeron canadensis HOM05D007320 ORTHO05D009290 2.2e-87 326.6 346 52.6
THA.LOC104800856 Tarenaya hassleriana HOM05D007320 ORTHO05D009290 2.2e-87 326.6 317 65.3
Phvul.005G098950 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 2.9e-87 326.2 344 51.5
Hund07849 Selenicereus undatus HOM05D007320 ORTHO05D009290 2.9e-87 326.2 326 51.5
Thecc.08G174300 Theobroma cacao HOM05D007320 ORTHO05D009290 2.9e-87 326.2 344 61.6
VMungo1080G0443 Vigna mungo HOM05D007320 ORTHO05D009290 6.5e-87 325.1 345 51.6
Psat5g275040 Pisum sativum HOM05D007320 ORTHO05D009290 1.5e-86 323.9 343 60.6
Nn3g20750 Nelumbo nucifera HOM05D007320 ORTHO05D009290 4.2e-86 322.4 345 53.3
MSTRG.20317 Avicennia marina HOM05D007320 ORTHO05D009290 3.6e-85 319.3 318 53.8
Cpa.g.sc209.6 Carica papaya HOM05D007320 ORTHO05D009290 8.0e-85 318.2 321 54.5
Migut.L01118 Erythranthe guttata HOM05D007320 ORTHO05D009290 8.0e-85 318.2 338 54.4
SGA_v2.0_scaffold313G48283 Striga asiatica HOM05D007320 ORTHO05D009290 1.0e-84 317.8 337 52.2
COL.COLO4_26851 Corchorus olitorius HOM05D007320 ORTHO05D009290 3.0e-84 316.2 344 56.7
Gohir.D05G254900 Gossypium hirsutum HOM05D007320 ORTHO05D009290 5.2e-84 315.5 344 50.9
Gorai.009G266400 Gossypium raimondii HOM05D007320 ORTHO05D009290 5.2e-84 315.5 344 50.9
Eucgr.F01954 Eucalyptus grandis HOM05D007320 ORTHO05D009290 8.8e-84 314.7 344 60.8
AT1G06270 Arabidopsis thaliana HOM05D007320 ORTHO05D009290 1.2e-83 314.3 347 60.2
Gohir.A05G253000 Gossypium hirsutum HOM05D007320 ORTHO05D009290 1.2e-83 314.3 344 50.9
Carub.0001s0564 Capsella rubella HOM05D007320 ORTHO05D009290 2.0e-83 313.5 347 60.2
ClCG02G009070 Citrullus lanatus HOM05D007320 ORTHO05D009290 3.4e-83 312.8 342 48.8
Thhalv10008110m.g Eutrema salsugineum HOM05D007320 ORTHO05D009290 5.7e-83 312.0 318 61.6
CsaV3_2G004500 Cucumis sativus L. HOM05D007320 ORTHO05D009290 7.5e-83 311.6 344 49.1
AL1G16280 Arabidopsis lyrata HOM05D007320 ORTHO05D009290 9.8e-83 311.2 318 62.3
CARHR005830 Cardamine hirsuta HOM05D007320 ORTHO05D009290 9.8e-83 311.2 344 59.3
Sc07g0005270 Simmondsia chinensis HOM05D007320 ORTHO05D009290 9.8e-83 311.2 334 61.4
Sp1g05080 Schrenkiella parvula HOM05D007320 ORTHO05D009290 4.8e-82 308.9 342 58.5
BcaB02g06809 Brassica carinata HOM05D007320 ORTHO05D009290 2.4e-81 306.6 332 59.3
Sed0016711 Sechium edule HOM05D007320 ORTHO05D009290 4.1e-81 305.8 339 56.0
C05p04580 Brassica napus HOM05D007320 ORTHO05D009290 7.0e-81 305.1 333 60.7
BolC5t29229H Brassica oleracea HOM05D007320 ORTHO05D009290 9.1e-81 304.7 333 60.7
BcaC05g24288 Brassica carinata HOM05D007320 ORTHO05D009290 2.7e-80 303.1 333 60.4
Migut.C00284 Erythranthe guttata HOM05D007320 ORTHO05D009290 5.9e-80 302.0 345 50.7
Aa31LG1G7290 Aethionema arabicum HOM05D007320 ORTHO05D009290 7.7e-80 301.6 317 56.8
AUR62035379 Chenopodium quinoa HOM05D007320 ORTHO05D009290 1.0e-79 301.2 311 61.4
A10p04990 Brassica napus HOM05D007320 ORTHO05D009290 1.7e-79 300.4 321 61.4
BraA10t42760Z Brassica rapa HOM05D007320 ORTHO05D009290 1.7e-79 300.4 321 61.4
Peaxi162Scf00745g00038 Petunia axillaris HOM05D007320 ORTHO05D009290 2.2e-79 300.1 329 50.8
SalBow8G5340 Salvia bowleyana HOM05D007320 ORTHO05D009290 2.9e-79 299.7 319 50.2
SalBow8G4737 Salvia bowleyana HOM05D007320 ORTHO05D009290 3.8e-79 299.3 319 50.5
Lsat_1_v5_gn_4_28301 Lactuca sativa HOM05D007320 ORTHO05D009290 5.0e-79 298.9 319 52.4
EL10Ac2g02568 Beta vulgaris HOM05D007320 ORTHO05D009290 2.5e-78 296.6 328 58.8
MBI06_g25716_MAGBIO Magnolia biondii HOM05D007320 ORTHO05D009290 2.3e-76 290.0 330 51.5
Migut.D01592 Erythranthe guttata HOM05D007320 ORTHO05D009290 3.0e-76 289.7 345 49.9
unitig_62.g23164 Utricularia gibba HOM05D007320 ORTHO05D009290 1.1e-70 271.2 334 46.1
PGR083G2305 Punica granatum HOM05D007320 ORTHO05D009290 1.8e-65 253.8 330 56.1
SHI10502 Sapria himalayana HOM05D007320 ORTHO05D009290 2.7e-64 250.0 320 53.1
TPR.G5736 Trifolium pratense HOM05D007320 ORTHO05D009290 2.3e-63 246.9 270 49.3
AUR62024073 Chenopodium quinoa HOM05D007320 ORTHO05D009290 6.8e-60 235.3 231 66.7
TPR.G34643 Trifolium pratense HOM05D007320 ORTHO05D009290 1.2e-56 224.6 183 62.8
MELO3C004341.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.6e-48 197.6 192 54.7
Phvul.005G098533 Phaseolus vulgaris HOM05D007320 ORTHO05D009290 4.6e-48 196.1 185 56.8
Cpa.g.sc209.4 Carica papaya HOM05D007320 ORTHO05D009290 5.2e-36 156.0 179 50.8
PGSC0003DMG401001710 Solanum tuberosum HOM05D007320 ORTHO05D009290 1.3e-34 151.4 113 64.6
arahy.Tifrunner.gnm1.ann1.CSM94Q Arachis hypogaea HOM05D007320 ORTHO05D009290 3.5e-32 143.3 113 58.4
Sc21g0003330 Simmondsia chinensis HOM05D007320 ORTHO05D009290 3.3e-30 136.7 182 45.6
arahy.Tifrunner.gnm1.ann1.66V1NK Arachis hypogaea HOM05D007320 ORTHO05D009290 2.6e-27 127.1 100 57.0
Sc21g0003340 Simmondsia chinensis HOM05D007320 ORTHO05D009290 3.4e-27 126.7 99 58.6
Dinv15900 Davidia involucrata HOM05D007320 ORTHO05D009290 1.1e-25 121.7 183 59.0
arahy.Tifrunner.gnm1.ann1.5PR57S Arachis hypogaea HOM05D007320 ORTHO05D009290 8.4e-18 95.5 113 50.4
SalBow7G0970 Salvia bowleyana HOM05D000555 ORTHO05D000646 3.5e-16 90.1 101 44.6
Peaxi162Scf00102g01049 Petunia axillaris HOM05D007320 ORTHO05D009290 1.2e-11 75.1 77 51.9
MELO3C021360.2 Cucumis melo HOM05D007320 ORTHO05D009290 1.1e-06 58.5 44 63.6


User provided reference genes

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