Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P606T22 Lonicera japonica HOM05D000149 ORTHO05D019044 6.1e-45 183.7 90 100.0
Lj1A606T23 Lonicera japonica HOM05D000149 ORTHO05D000076 1.0e-39 166.4 90 90.0
Lj1A603T12 Lonicera japonica HOM05D000149 ORTHO05D000076 3.4e-35 151.4 90 77.8
Dinv15610 Davidia involucrata HOM05D000149 ORTHO05D000076 5.4e-25 117.5 91 58.2
Hma1.2p1_0836F.1_g225950 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 2.7e-24 115.2 88 56.8
Dinv06610 Davidia involucrata HOM05D000149 ORTHO05D000076 2.3e-23 112.1 91 56.0
Dinv06282 Davidia involucrata HOM05D000149 ORTHO05D000076 3.9e-23 111.3 91 56.0
Hma1.2p1_1029F.1_g249570 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 5.1e-23 110.9 86 57.0
Hma1.2p1_3112F.1_g332766 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 5.1e-23 110.9 86 57.0
Dinv06608 Davidia involucrata HOM05D000149 ORTHO05D000076 6.6e-23 110.5 88 56.8
Dinv06284 Davidia involucrata HOM05D000253 ORTHO05D019044 3.4e-19 98.2 86 55.8
Rhsim02G0197400 Rhododendron simsii HOM05D000149 ORTHO05D000076 1.2e-13 79.7 89 43.8
vmacro09190 Vaccinium macrocarpon HOM05D000149 ORTHO05D000076 2.1e-13 79.0 90 41.1
vmacro09187 Vaccinium macrocarpon HOM05D000149 ORTHO05D000076 3.6e-13 78.2 91 44.0
Rhsim04G0082000 Rhododendron simsii HOM05D000149 ORTHO05D000076 1.8e-12 75.9 91 39.6
Rhsim04G0081500 Rhododendron simsii HOM05D000149 ORTHO05D000076 4.0e-12 74.7 90 40.0
TAR371G0648 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.3e-12 74.3 86 40.7
THA.LOC104822531 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 9.0e-12 73.6 86 38.4
THA.LOC104822547 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 9.0e-12 73.6 86 38.4
Hma1.2p1_1247F.1_g270210 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 1.5e-11 72.8 92 41.3
TAR371G0562 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.5e-11 72.8 86 39.5
TAR371G0782 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.5e-11 72.8 89 38.2
TAR629G2002 Trochodendron aralioides HOM05D000149 ORTHO05D000076 2.6e-11 72.0 85 38.8
THA.LOC104805597 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 5.8e-11 70.9 85 42.4
THA.LOC104822542 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 5.8e-11 70.9 86 36.0
TAR371G0466 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.8e-11 70.9 89 36.0
Rhsim04G0082600 Rhododendron simsii HOM05D000149 ORTHO05D000076 7.6e-11 70.5 89 38.2
Hma1.2p1_1474F.1_g285760 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 9.9e-11 70.1 92 40.2
Rhsim04G0082200 Rhododendron simsii HOM05D000149 ORTHO05D000076 1.3e-10 69.7 89 37.1
RcHm_v2.0_Chr4g0400921 Rosa chinensis HOM05D000149 ORTHO05D000076 6.4e-10 67.4 87 41.4
Oeu008438.1 Olea europaea HOM05D000149 ORTHO05D000076 1.1e-09 66.6 92 35.9
Lj8A145T78 Lonicera japonica HOM05D000149 ORTHO05D000076 1.4e-09 66.2 74 41.9
Migut.E00399 Erythranthe guttata HOM05D000149 ORTHO05D000076 1.9e-09 65.9 86 38.4
Potri.017G122900 Populus trichocarpa HOM05D000149 ORTHO05D000076 2.4e-09 65.5 90 36.7
THA.LOC104822498 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 2.4e-09 65.5 86 37.2
Rhsim04G0081700 Rhododendron simsii HOM05D000149 ORTHO05D009673 5.4e-09 64.3 90 33.3
COL.COLO4_27147 Corchorus olitorius HOM05D000149 ORTHO05D019044 9.3e-09 63.5 89 40.4
MD09G1253900 Malus domestica HOM05D000149 ORTHO05D000076 9.3e-09 63.5 95 38.9
GSVIVG01030939001 Vitis vinifera HOM05D000149 ORTHO05D000076 9.3e-09 63.5 86 34.9
BcaB02g10081 Brassica carinata HOM05D000149 ORTHO05D000076 1.2e-08 63.2 85 37.6
A07p19590 Brassica napus HOM05D000149 ORTHO05D000076 1.2e-08 63.2 85 37.6
BraA07t29662Z Brassica rapa HOM05D000149 ORTHO05D000076 1.2e-08 63.2 85 37.6
Sabra17G0101500 Salix brachista HOM05D000149 ORTHO05D019044 1.6e-08 62.8 89 34.8
SGA_v2.0_scaffold38G15045 Striga asiatica HOM05D000149 ORTHO05D000076 2.1e-08 62.4 89 38.2
THA.LOC104805592 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 2.1e-08 62.4 85 37.6
COL.COLO4_27145 Corchorus olitorius HOM05D000149 ORTHO05D019044 2.7e-08 62.0 90 38.9
Sabra17G0104200 Salix brachista HOM05D000149 ORTHO05D000076 2.7e-08 62.0 89 34.8
AT5G38100 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 3.5e-08 61.6 85 35.3
C06p17990 Brassica napus HOM05D000149 ORTHO05D000076 3.5e-08 61.6 85 36.5
BolC6t36996H Brassica oleracea HOM05D000149 ORTHO05D000076 3.5e-08 61.6 85 36.5
Dinv16181 Davidia involucrata HOM05D000149 ORTHO05D000076 3.5e-08 61.6 87 35.6
THA.LOC104822516 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 3.5e-08 61.6 89 32.6
SalBow8G5547 Salvia bowleyana HOM05D000149 ORTHO05D000076 4.6e-08 61.2 86 36.0
THA.LOC104822559 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 4.6e-08 61.2 86 34.9
MSTRG.23604 Avicennia marina HOM05D000149 ORTHO05D000076 6.0e-08 60.8 86 36.0
Migut.H00254 Erythranthe guttata HOM05D000149 ORTHO05D000076 6.0e-08 60.8 88 37.5
Eucgr.B02883 Eucalyptus grandis HOM05D000149 ORTHO05D000076 6.0e-08 60.8 90 40.0
SGA_v2.0_scaffold14G06921 Striga asiatica HOM05D000149 ORTHO05D000076 6.0e-08 60.8 89 37.1
BcaC08g44356 Brassica carinata HOM05D000149 ORTHO05D000076 7.8e-08 60.5 85 36.5
COL.COLO4_27153 Corchorus olitorius HOM05D000149 ORTHO05D000076 7.8e-08 60.5 88 36.4
MD09G1254300 Malus domestica HOM05D000149 ORTHO05D000076 7.8e-08 60.5 90 35.6
Nitab4.5_0002456g0090 Nicotiana tabacum HOM05D000149 ORTHO05D000076 7.8e-08 60.5 86 32.6
Potri.017G122700 Populus trichocarpa HOM05D000149 ORTHO05D000076 7.8e-08 60.5 90 36.7
BcaB02g08019 Brassica carinata HOM05D000149 ORTHO05D000076 1.0e-07 60.1 85 35.3
MD06G1223600 Malus domestica HOM05D000149 ORTHO05D000076 1.0e-07 60.1 88 39.8
Nitab4.5_0005700g0010 Nicotiana tabacum HOM05D000149 ORTHO05D000076 1.0e-07 60.1 88 31.8
THA.LOC104805564 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 1.0e-07 60.1 89 32.6
TAR629G1630 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.0e-07 60.1 86 34.9
AL7G52990 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 1.3e-07 59.7 85 35.3
AT5G37970 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 1.3e-07 59.7 85 36.5
Dinv14857 Davidia involucrata HOM05D000149 ORTHO05D000076 1.3e-07 59.7 88 37.5
Dinv19664 Davidia involucrata HOM05D000149 ORTHO05D000076 1.3e-07 59.7 89 39.3
Eucgr.B02884 Eucalyptus grandis HOM05D000149 ORTHO05D000076 1.3e-07 59.7 87 39.1
Sp7g03980 Schrenkiella parvula HOM05D000149 ORTHO05D000076 1.3e-07 59.7 85 35.3
Thecc.10G169800 Theobroma cacao HOM05D000149 ORTHO05D000076 1.3e-07 59.7 86 38.4
GSVIVG01030940001 Vitis vinifera HOM05D000149 ORTHO05D000076 1.3e-07 59.7 86 33.7
AT5G38780 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 1.7e-07 59.3 85 34.1
CiPaw.05G246500 Carya illinoinensis HOM05D000149 ORTHO05D000076 1.7e-07 59.3 88 35.2
Ciclev10004079m.g Citrus clementina HOM05D000149 ORTHO05D000076 1.7e-07 59.3 85 31.8
Peaxi162Scf03976g00010 Petunia axillaris HOM05D000149 ORTHO05D000076 1.7e-07 59.3 86 34.9
Potri.017G122950 Populus trichocarpa HOM05D000149 ORTHO05D000076 1.7e-07 59.3 90 33.3
CARHR214640 Cardamine hirsuta HOM05D000149 ORTHO05D000076 2.3e-07 58.9 85 35.3
Dinv14856 Davidia involucrata HOM05D000149 ORTHO05D000076 2.3e-07 58.9 87 35.6
Oeu055004.1 Olea europaea HOM05D000149 ORTHO05D000076 2.3e-07 58.9 86 39.5
Cc11_g09140 Coffea canephora HOM05D000149 ORTHO05D000076 3.0e-07 58.5 87 35.6
Eucgr.J01532 Eucalyptus grandis HOM05D000149 ORTHO05D000076 3.0e-07 58.5 90 34.4
Potri.015G041900 Populus trichocarpa HOM05D000149 ORTHO05D000076 3.0e-07 58.5 86 41.9
Cpa.g.sc170.3 Carica papaya HOM05D000149 ORTHO05D000076 3.9e-07 58.2 85 37.6
CiPaw.16G090300 Carya illinoinensis HOM05D000149 ORTHO05D000076 3.9e-07 58.2 89 38.2
COL.COLO4_27148 Corchorus olitorius HOM05D000149 ORTHO05D019044 3.9e-07 58.2 90 33.3
Thhalv10028313m.g Eutrema salsugineum HOM05D000149 ORTHO05D000076 3.9e-07 58.2 70 38.6
Hma1.2p1_0283F.1_g113730 Hydrangea macrophylla HOM05D000149 ORTHO05D000076 3.9e-07 58.2 87 40.2
MD06G1223500 Malus domestica HOM05D000149 ORTHO05D000076 3.9e-07 58.2 86 41.9
MD06G1223700 Malus domestica HOM05D000149 ORTHO05D000076 3.9e-07 58.2 90 37.8
MD06G1223800 Malus domestica HOM05D000149 ORTHO05D000076 3.9e-07 58.2 88 39.8
MD15G1255300 Malus domestica HOM05D000149 ORTHO05D000076 3.9e-07 58.2 93 38.7
PGR102G1601 Punica granatum HOM05D000149 ORTHO05D000076 3.9e-07 58.2 87 37.9
Actinidia15240 Actinidia chinensis HOM05D000149 ORTHO05D000076 5.1e-07 57.8 86 32.6
AT5G37990 Arabidopsis thaliana HOM05D000149 ORTHO05D000076 5.1e-07 57.8 85 34.1
Dinv19753 Davidia involucrata HOM05D000149 ORTHO05D000076 5.1e-07 57.8 68 42.6
Migut.H02148 Erythranthe guttata HOM05D000149 ORTHO05D000076 5.1e-07 57.8 86 36.0
FAN04G0066 Fragaria x ananassa HOM05D000149 ORTHO05D000076 5.1e-07 57.8 95 38.9
Medtr1g108660 Medicago truncatula HOM05D000149 ORTHO05D000076 5.1e-07 57.8 86 31.4
RcHm_v2.0_Chr4g0400991 Rosa chinensis HOM05D000149 ORTHO05D000076 5.1e-07 57.8 90 38.9
RcHm_v2.0_Chr7g0178961 Rosa chinensis HOM05D000149 ORTHO05D000076 5.1e-07 57.8 90 36.7
TPR.G4891 Trifolium pratense HOM05D000149 ORTHO05D000076 5.1e-07 57.8 86 31.4
TAR629G1902 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.1e-07 57.8 86 33.7
TAR629G2309 Trochodendron aralioides HOM05D000149 ORTHO05D000076 5.1e-07 57.8 90 36.7
Carub.0007s3709 Capsella rubella HOM05D000149 ORTHO05D000076 6.6e-07 57.4 86 34.9
Cpa.g.sc116.3 Carica papaya HOM05D000149 ORTHO05D000076 6.6e-07 57.4 88 31.8
Oeu059625.1 Olea europaea HOM05D000149 ORTHO05D000076 6.6e-07 57.4 65 41.5
Prupe.5G228800 Prunus persica HOM05D000149 ORTHO05D000076 6.6e-07 57.4 92 38.0
Actinidia36691 Actinidia chinensis HOM05D000149 ORTHO05D000076 8.7e-07 57.0 86 31.4
FAN13G0927 Fragaria x ananassa HOM05D000149 ORTHO05D000076 8.7e-07 57.0 94 38.3
RcHm_v2.0_Chr3g0486091 Rosa chinensis HOM05D000149 ORTHO05D000076 8.7e-07 57.0 81 38.3
RcHm_v2.0_Chr7g0178991 Rosa chinensis HOM05D000149 ORTHO05D000076 8.7e-07 57.0 90 37.8
Oeu035019.1 Olea europaea HOM05D000149 ORTHO05D000076 1.1e-06 56.6 84 34.5
PGSC0003DMG400046602 Solanum tuberosum HOM05D000149 ORTHO05D000076 1.1e-06 56.6 91 40.7
TAR629G1798 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.1e-06 56.6 86 32.6
TAR629G2533 Trochodendron aralioides HOM05D000149 ORTHO05D000076 1.1e-06 56.6 86 32.6
Aa31LG9G17250 Aethionema arabicum HOM05D000149 ORTHO05D000076 1.5e-06 56.2 79 32.9
AL7G52810 Arabidopsis lyrata HOM05D000149 ORTHO05D000076 1.5e-06 56.2 85 34.1
Prupe.5G228700 Prunus persica HOM05D000149 ORTHO05D000076 1.5e-06 56.2 88 36.4
TWI81G0816 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 1.5e-06 56.2 83 30.1
Oeu036131.1 Olea europaea HOM05D000149 ORTHO05D000076 1.9e-06 55.8 83 37.3
Thecc.10G170000 Theobroma cacao HOM05D000149 ORTHO05D000076 1.9e-06 55.8 85 32.9
GSVIVG01008380001 Vitis vinifera HOM05D000149 ORTHO05D000076 2.5e-06 55.5 91 33.0
MD10G1005900 Malus domestica HOM05D000149 ORTHO05D000076 3.3e-06 55.1 95 37.9
Potri.017G121800 Populus trichocarpa HOM05D000149 ORTHO05D000076 3.3e-06 55.1 93 29.0
Potri.017G122000 Populus trichocarpa HOM05D000149 ORTHO05D000076 3.3e-06 55.1 94 29.8
RcHm_v2.0_Chr2g0128631 Rosa chinensis HOM05D000149 ORTHO05D000076 3.3e-06 55.1 90 35.6
TWI81G0278 Tripterygium wilfordii HOM05D000149 ORTHO05D000076 3.3e-06 55.1 70 41.4
FvH4_5g16970 Fragaria vesca HOM05D000149 ORTHO05D000076 4.3e-06 54.7 86 36.0
Nn4g24050 Nelumbo nucifera HOM05D000149 ORTHO05D000076 4.3e-06 54.7 86 37.2
QL10p027335 Quercus lobata HOM05D000149 ORTHO05D000076 4.3e-06 54.7 66 43.9
THA.LOC104805563 Tarenaya hassleriana HOM05D000149 ORTHO05D000076 4.3e-06 54.7 84 31.0
Peaxi162Scf01127g00029 Petunia axillaris HOM05D000149 ORTHO05D000076 5.6e-06 54.3 88 40.9
Aqoxy1G01070 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 7.3e-06 53.9 68 41.2
Dinv10418 Davidia involucrata HOM05D000149 ORTHO05D000076 7.3e-06 53.9 68 41.2
Dinv19750 Davidia involucrata HOM05D000149 ORTHO05D000076 7.3e-06 53.9 68 41.2
QL01p002634 Quercus lobata HOM05D000149 ORTHO05D000076 7.3e-06 53.9 88 34.1
RcHm_v2.0_Chr2g0137031 Rosa chinensis HOM05D000149 ORTHO05D000076 7.3e-06 53.9 92 35.9
Aqoxy3G01917 Aquilegia oxysepala HOM05D000149 ORTHO05D000076 9.6e-06 53.5 86 37.2
Carub.0007s3708 Capsella rubella HOM05D000149 ORTHO05D000076 9.6e-06 53.5 86 32.6
Ca_23694_v3 Cicer arietinum L. HOM05D000149 ORTHO05D000076 9.6e-06 53.5 86 29.1
Cc07_g18740 Coffea canephora HOM05D000149 ORTHO05D000076 9.6e-06 53.5 87 35.6
MD06G1227300 Malus domestica HOM05D000149 ORTHO05D000076 9.6e-06 53.5 89 36.0
Prupe.5G228500 Prunus persica HOM05D000149 ORTHO05D000076 9.6e-06 53.5 88 35.2
RcHm_v2.0_Chr3g0486051 Rosa chinensis HOM05D000149 ORTHO05D000076 9.6e-06 53.5 90 33.3
RcHm_v2.0_Chr7g0179031 Rosa chinensis HOM05D000149 ORTHO05D000076 9.6e-06 53.5 86 36.0


User provided reference genes

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