Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P537T15 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-62 241.1 118 100.0
Lj1P529T7 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-56 222.6 118 90.7
Lj1P673T32 Lonicera japonica HOM05D000007 ORTHO05D000039 8.9e-36 153.7 119 68.1
Lj1P670T34 Lonicera japonica HOM05D000007 ORTHO05D000039 1.7e-34 149.4 119 66.4
Lj1A530T29 Lonicera japonica HOM05D000007 ORTHO05D000039 5.4e-33 144.4 81 87.7
Lj1C664T13 Lonicera japonica HOM05D000007 ORTHO05D000039 3.9e-31 138.3 99 71.7
Lju1074C2T0 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-30 136.7 121 60.3
Lj1P565T8 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-27 125.6 119 58.8
Lj1P664T40 Lonicera japonica HOM05D000007 ORTHO05D000039 5.4e-25 117.9 120 56.7
Lj1P665T33 Lonicera japonica HOM05D000007 ORTHO05D000039 1.6e-24 116.3 95 64.2
Lj1C674T7 Lonicera japonica HOM05D000007 ORTHO05D000039 4.0e-20 101.7 121 48.8
Lj1C663T1 Lonicera japonica HOM05D000007 ORTHO05D000039 2.6e-19 99.0 121 45.5
Lj1C671T2 Lonicera japonica HOM05D000007 ORTHO05D000039 9.9e-19 97.1 97 60.8
Lj1P593T30 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-18 95.5 98 56.1
Lju225C3T2 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-18 95.5 122 50.8
Lj1P591T21 Lonicera japonica HOM05D000007 ORTHO05D000039 3.8e-18 95.1 132 46.2
Lju1074C2T6 Lonicera japonica HOM05D000007 ORTHO05D000039 8.4e-18 94.0 84 59.5
Lj1C599G12 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-17 92.8 123 46.3
Lj1A671T53 Lonicera japonica HOM05D000007 ORTHO05D000039 9.3e-17 90.5 121 43.8
Lj1P673T22 Lonicera japonica HOM05D000007 ORTHO05D000039 3.5e-16 88.6 112 47.3
Lj1P670T24 Lonicera japonica HOM05D000007 ORTHO05D000039 4.6e-16 88.2 112 47.3
Lj1P599T56 Lonicera japonica HOM05D000007 ORTHO05D000039 6.0e-16 87.8 121 45.5
Lju1609C1G1 Lonicera japonica HOM05D000007 ORTHO05D000039 3.0e-15 85.5 97 56.7
Lj1P593T21 Lonicera japonica HOM05D000007 ORTHO05D000039 5.1e-15 84.7 78 59.0
Lju225C0T9 Lonicera japonica HOM05D000007 ORTHO05D000039 8.7e-15 84.0 86 57.0
Lj1P660T10 Lonicera japonica HOM05D000007 ORTHO05D000039 8.1e-13 77.4 98 48.0
CSS0045243 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 4.0e-12 75.1 96 44.8
Lj1P794T16 Lonicera japonica HOM05D000007 ORTHO05D000039 5.3e-12 74.7 108 42.6
Lj4C425G8 Lonicera japonica HOM05D000007 ORTHO05D000039 5.3e-12 74.7 88 48.9
Lju1220A4G22 Lonicera japonica HOM05D000007 ORTHO05D000039 5.3e-12 74.7 118 39.8
Dinv15480 Davidia involucrata HOM05D000007 ORTHO05D000039 6.9e-12 74.3 111 41.4
Lj1P655T32 Lonicera japonica HOM05D000007 ORTHO05D000039 6.9e-12 74.3 131 38.9
QL04p019425 Quercus lobata HOM05D000007 ORTHO05D000039 2.6e-11 72.4 95 43.2
Lj1C655T5 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-11 72.0 103 41.7
Lj8P116T38 Lonicera japonica HOM05D000007 ORTHO05D000039 3.4e-11 72.0 106 38.7
Lj1P664T31 Lonicera japonica HOM05D000007 ORTHO05D000039 4.5e-11 71.6 87 48.3
Dinv05355 Davidia involucrata HOM05D000007 ORTHO05D000039 7.6e-11 70.9 111 40.5
Lj1E674T0 Lonicera japonica HOM05D000007 ORTHO05D000039 9.9e-11 70.5 74 50.0
Haze_12717 Corylus avellana HOM05D000007 ORTHO05D000039 1.7e-10 69.7 88 44.3
Dinv23704 Davidia involucrata HOM05D000007 ORTHO05D000039 1.7e-10 69.7 89 46.1
QL04p019213 Quercus lobata HOM05D000007 ORTHO05D000039 1.7e-10 69.7 91 45.1
CSS0044141 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.2e-10 69.3 113 42.5
Dinv19778 Davidia involucrata HOM05D000007 ORTHO05D000039 2.2e-10 69.3 84 42.9
Lju114C7G9 Lonicera japonica HOM05D000007 ORTHO05D000039 2.9e-10 68.9 86 51.2
CSS0030918 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 4.9e-10 68.2 91 45.1
Haze_12718 Corylus avellana HOM05D000007 ORTHO05D000039 4.9e-10 68.2 90 42.2
Manes.07G068800 Manihot esculenta HOM05D000007 ORTHO05D000039 4.9e-10 68.2 90 43.3
Actinidia07889 Actinidia chinensis HOM05D000007 ORTHO05D000039 8.4e-10 67.4 110 40.9
CSS0030264 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 8.4e-10 67.4 91 45.1
Lj1P662T13 Lonicera japonica HOM05D000007 ORTHO05D000039 8.4e-10 67.4 97 42.3
Lj1P665T26 Lonicera japonica HOM05D000007 ORTHO05D000039 8.4e-10 67.4 96 42.7
Lj1C674T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-09 67.0 89 43.8
Lj1P671T17 Lonicera japonica HOM05D000007 ORTHO05D000039 1.1e-09 67.0 89 43.8
QL04p019188 Quercus lobata HOM05D000007 ORTHO05D000039 1.4e-09 66.6 93 44.1
CSS0019634 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.9e-09 66.2 91 41.8
CSS0034858 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.9e-09 66.2 91 41.8
CSS0040260 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.9e-09 66.2 96 41.7
CSS0047811 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.9e-09 66.2 91 41.8
Lj1P652T32 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-09 66.2 95 44.2
QL04p019108 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-09 66.2 91 44.0
QL04p019171 Quercus lobata HOM05D000007 ORTHO05D000039 1.9e-09 66.2 90 44.4
vmacro00185 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.9e-09 66.2 91 42.9
vmacro12404 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.9e-09 66.2 90 43.3
vmacro23134 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.9e-09 66.2 91 42.9
Dinv21276 Davidia involucrata HOM05D000007 ORTHO05D000039 2.4e-09 65.9 119 37.8
Rhsim11G0050800 Rhododendron simsii HOM05D000007 ORTHO05D000039 2.4e-09 65.9 82 45.1
Ciclev10030186m.g Citrus clementina HOM05D000007 ORTHO05D000039 3.2e-09 65.5 89 42.7
MSTRG.6523 Avicennia marina HOM05D000007 ORTHO05D000039 4.2e-09 65.1 83 39.8
Lj1P653T16 Lonicera japonica HOM05D000007 ORTHO05D000039 4.2e-09 65.1 95 43.2
QL04p018852 Quercus lobata HOM05D000007 ORTHO05D000039 4.2e-09 65.1 91 39.6
CSS0009539 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 5.5e-09 64.7 97 40.2
Manes.07G007400 Manihot esculenta HOM05D000007 ORTHO05D000039 5.5e-09 64.7 89 43.8
Lj1A662G33 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-09 64.3 98 40.8
Lj1P652T23 Lonicera japonica HOM05D000007 ORTHO05D000039 7.1e-09 64.3 102 37.3
QL04p019179 Quercus lobata HOM05D000007 ORTHO05D000039 7.1e-09 64.3 91 40.7
QL04p019206 Quercus lobata HOM05D000007 ORTHO05D000039 7.1e-09 64.3 91 40.7
Gohir.A05G369700 Gossypium hirsutum HOM05D000007 ORTHO05D000039 9.3e-09 63.9 95 37.9
Potri.001G262900 Populus trichocarpa HOM05D000007 ORTHO05D000039 9.3e-09 63.9 97 42.3
Gohir.D04G045600 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.2e-08 63.5 95 37.9
QL04p019132 Quercus lobata HOM05D000007 ORTHO05D000039 1.6e-08 63.2 96 36.5
SalBow7G4817 Salvia bowleyana HOM05D000007 ORTHO05D000039 1.6e-08 63.2 87 42.5
vmacro12403 Vaccinium macrocarpon HOM05D000007 ORTHO05D000039 1.6e-08 63.2 90 43.3
CSS0048184 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 2.1e-08 62.8 92 43.5
QL04p019005 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-08 62.8 115 40.9
QL04p019437 Quercus lobata HOM05D000007 ORTHO05D000039 2.1e-08 62.8 91 42.9
DCAR_012984 Daucus carota HOM05D000007 ORTHO05D000039 2.7e-08 62.4 103 41.7
Lj1C671G9 Lonicera japonica HOM05D000007 ORTHO05D000039 2.7e-08 62.4 78 47.4
Rhsim04G0064400 Rhododendron simsii HOM05D000007 ORTHO05D000039 2.7e-08 62.4 90 42.2
Rhsim11G0051000 Rhododendron simsii HOM05D000007 ORTHO05D000039 2.7e-08 62.4 91 38.5
DCAR_019197 Daucus carota HOM05D000007 ORTHO05D000039 3.5e-08 62.0 106 37.7
Duzib187G1873 Durio zibethinus HOM05D000007 ORTHO05D000039 3.5e-08 62.0 95 40.0
QL04p018974 Quercus lobata HOM05D000007 ORTHO05D000039 3.5e-08 62.0 119 40.3
Hma1.2p1_1267F.1_g271540 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 6.0e-08 61.2 115 39.1
Hma1.2p1_2614F.1_g325400 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 6.0e-08 61.2 115 39.1
Manes.07G011100 Manihot esculenta HOM05D000007 ORTHO05D000039 6.0e-08 61.2 87 41.4
QL04p019471 Quercus lobata HOM05D000007 ORTHO05D000039 6.0e-08 61.2 95 42.1
CSS0036577 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 7.9e-08 60.8 89 42.7
Nitab4.5_0003693g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000039 7.9e-08 60.8 114 38.6
Solyc10g008580.1 Solanum lycopersicum HOM05D000007 ORTHO05D000039 1.0e-07 60.5 88 39.8
CSS0014854 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 1.3e-07 60.1 79 45.6
Gorai.012G050800 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.3e-07 60.1 95 36.8
Hma1.2p1_0178F.1_g078430 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.3e-07 60.1 116 38.8
Rhsim12G0196500 Rhododendron simsii HOM05D000007 ORTHO05D000039 1.3e-07 60.1 128 35.2
Manes.10G077179 Manihot esculenta HOM05D000007 ORTHO05D000039 1.8e-07 59.7 89 40.4
QL08p040468 Quercus lobata HOM05D000007 ORTHO05D000039 1.8e-07 59.7 99 37.4
Lsat_1_v5_gn_2_11481 Lactuca sativa HOM05D000007 ORTHO05D000039 2.3e-07 59.3 86 39.5
Lj1C654T14 Lonicera japonica HOM05D000007 ORTHO05D000039 2.3e-07 59.3 89 42.7
Lju1601A0G41 Lonicera japonica HOM05D000007 ORTHO05D000039 2.3e-07 59.3 89 42.7
Manes.07G011000 Manihot esculenta HOM05D000007 ORTHO05D000039 3.0e-07 58.9 113 36.3
Nitab4.5_0009868g0020 Nicotiana tabacum HOM05D000007 ORTHO05D000039 3.0e-07 58.9 87 40.2
QL04p019096 Quercus lobata HOM05D000007 ORTHO05D000039 3.0e-07 58.9 91 36.3
QL07p003478 Quercus lobata HOM05D000007 ORTHO05D029344 3.0e-07 58.9 84 45.2
TWI31G0212 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 3.0e-07 58.9 83 43.4
COL.COLO4_12256 Corchorus olitorius HOM05D000007 ORTHO05D000039 3.9e-07 58.5 95 37.9
Lj1P592T25 Lonicera japonica HOM05D000007 ORTHO05D000039 3.9e-07 58.5 82 42.7
PSO782G3931 Papaver somniferum HOM05D000007 ORTHO05D000017 3.9e-07 58.5 88 36.4
Sopen10g004400 Solanum pennellii HOM05D000007 ORTHO05D000039 5.1e-07 58.2 88 39.8
PGSC0003DMG400021673 Solanum tuberosum HOM05D000007 ORTHO05D000039 5.1e-07 58.2 92 38.0
TWI32G0895 Tripterygium wilfordii HOM05D000007 ORTHO05D000039 5.1e-07 58.2 99 37.4
Eucgr.C02180 Eucalyptus grandis HOM05D000007 ORTHO05D000039 6.7e-07 57.8 84 40.5
QL04p019478 Quercus lobata HOM05D000007 ORTHO05D000039 6.7e-07 57.8 87 42.5
CSS0017530 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000039 8.7e-07 57.4 83 42.2
Migut.M00313 Erythranthe guttata HOM05D000007 ORTHO05D000039 8.7e-07 57.4 83 42.2
QL04p019545 Quercus lobata HOM05D000007 ORTHO05D000039 8.7e-07 57.4 91 40.7
Migut.M00318 Erythranthe guttata HOM05D000007 ORTHO05D000039 1.1e-06 57.0 83 42.2
FAN16G0172 Fragaria x ananassa HOM05D000007 ORTHO05D000039 1.1e-06 57.0 89 42.7
Dinv07011 Davidia involucrata HOM05D000007 ORTHO05D000039 1.5e-06 56.6 82 40.2
Hma1.2p1_0178F.1_g078390 Hydrangea macrophylla HOM05D000007 ORTHO05D000039 1.5e-06 56.6 82 40.2
Lj1P674T76 Lonicera japonica HOM05D000007 ORTHO05D000039 1.5e-06 56.6 94 38.3
PSO566G0304 Papaver somniferum HOM05D000007 ORTHO05D000017 1.5e-06 56.6 88 42.0
Gohir.D12G088200 Gossypium hirsutum HOM05D000007 ORTHO05D000039 1.9e-06 56.2 89 41.6
Gorai.008G098100 Gossypium raimondii HOM05D000007 ORTHO05D000039 1.9e-06 56.2 89 41.6
Lj1C654T3 Lonicera japonica HOM05D000007 ORTHO05D000039 1.9e-06 56.2 120 35.8
Migut.M00305 Erythranthe guttata HOM05D000007 ORTHO05D000039 2.5e-06 55.8 81 40.7
Migut.M00308 Erythranthe guttata HOM05D000007 ORTHO05D000039 2.5e-06 55.8 83 41.0
PGSC0003DMG400010275 Solanum tuberosum HOM05D000007 ORTHO05D000039 2.5e-06 55.8 90 36.7
Thecc.04G089800 Theobroma cacao HOM05D000007 ORTHO05D000039 2.5e-06 55.8 95 36.8
Actinidia11170 Actinidia chinensis HOM05D000007 ORTHO05D000039 3.3e-06 55.5 127 34.6
AUR62011562 Chenopodium quinoa HOM05D000007 ORTHO05D000039 3.3e-06 55.5 119 33.6
Prupe.5G081900 Prunus persica HOM05D000007 ORTHO05D000039 3.3e-06 55.5 105 41.0
Cfa005168 Carpinus fangiana HOM05D000007 ORTHO05D000039 4.3e-06 55.1 90 43.3
Gohir.A12G083765 Gossypium hirsutum HOM05D000007 ORTHO05D000039 4.3e-06 55.1 89 40.4
Lj1P654T46 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-06 55.1 121 34.7
Lj7P502T13 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-06 55.1 81 39.5
Lju1601C0T10 Lonicera japonica HOM05D000007 ORTHO05D000039 4.3e-06 55.1 121 34.7
QL08p040450 Quercus lobata HOM05D000007 ORTHO05D000039 4.3e-06 55.1 95 36.8
COL.COLO4_06940 Corchorus olitorius HOM05D000007 ORTHO05D000521 5.6e-06 54.7 75 42.7
ECA238G0713 Erigeron canadensis HOM05D000007 ORTHO05D000039 5.6e-06 54.7 90 32.2
Nitab4.5_0000635g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000039 5.6e-06 54.7 82 37.8
Rhsim06G0124400 Rhododendron simsii HOM05D001399 ORTHO05D000039 5.6e-06 54.7 95 40.0
Cc05_g06410 Coffea canephora HOM05D000007 ORTHO05D000039 7.4e-06 54.3 111 29.7
Lj1A656G15 Lonicera japonica HOM05D000007 ORTHO05D000039 7.4e-06 54.3 73 45.2
Lj8P354T16 Lonicera japonica HOM05D000007 ORTHO05D000039 7.4e-06 54.3 83 39.8
Migut.M00316 Erythranthe guttata HOM05D000007 ORTHO05D000039 9.6e-06 53.9 83 39.8


User provided reference genes

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