Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P522T31 Lonicera japonica HOM05D004673 ORTHO05D005596 4.1e-63 246.1 362 100.0
Lj2P776T43 Lonicera japonica HOM05D004673 ORTHO05D005596 1.3e-21 108.2 107 51.4
GSVIVG01025477001 Vitis vinifera HOM05D004673 ORTHO05D005596 2.3e-21 107.5 98 53.1
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 9.5e-20 102.1 100 52.0
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 9.5e-20 102.1 98 53.1
DCAR_030102 Daucus carota HOM05D004673 ORTHO05D005596 1.2e-19 101.7 95 53.7
Haze_22936 Corylus avellana HOM05D004673 ORTHO05D005596 2.1e-19 100.9 95 54.7
CSS0005892 Camellia sinensis var. sinensis HOM05D004673 ORTHO05D005596 2.8e-19 100.5 97 53.6
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 1.4e-18 98.2 75 60.0
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 2.3e-18 97.4 94 47.9
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 2.3e-18 97.4 88 56.8
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 5.2e-18 96.3 94 51.1
Cfa009556 Carpinus fangiana HOM05D004673 ORTHO05D005596 6.8e-18 95.9 96 51.0
DCAR_030110 Daucus carota HOM05D004673 ORTHO05D005596 6.8e-18 95.9 108 47.2
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 8.9e-18 95.5 83 51.8
QL02p095991 Quercus lobata HOM05D004673 ORTHO05D005596 8.9e-18 95.5 90 50.0
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 1.2e-17 95.1 96 49.0
Sed0024334 Sechium edule HOM05D004673 ORTHO05D005596 1.2e-17 95.1 97 52.6
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 1.5e-17 94.7 90 50.0
QL01p004573 Quercus lobata HOM05D004673 ORTHO05D005596 2.0e-17 94.4 97 49.5
QL01p003771 Quercus lobata HOM05D004673 ORTHO05D005596 2.6e-17 94.0 97 49.5
vmacro23200 Vaccinium macrocarpon HOM05D005410 ORTHO05D007394 2.6e-17 94.0 98 54.1
DCAR_030100 Daucus carota HOM05D004673 ORTHO05D005596 3.4e-17 93.6 94 50.0
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 4.4e-17 93.2 96 49.0
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 5.7e-17 92.8 96 50.0
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 5.7e-17 92.8 86 53.5
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 7.5e-17 92.4 99 50.5
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 9.8e-17 92.0 99 45.5
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 9.8e-17 92.0 93 50.5
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 1.3e-16 91.7 95 47.4
DCAR_030112 Daucus carota HOM05D004673 ORTHO05D005596 1.3e-16 91.7 94 47.9
QL01p004552 Quercus lobata HOM05D004673 ORTHO05D005596 2.8e-16 90.5 98 48.0
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 3.7e-16 90.1 81 55.6
Lsat_1_v5_gn_6_55460 Lactuca sativa HOM05D004673 ORTHO05D005596 3.7e-16 90.1 81 55.6
Rhsim13G0233200 Rhododendron simsii HOM05D004673 ORTHO05D005596 3.7e-16 90.1 83 57.8
DCAR_030979 Daucus carota HOM05D004673 ORTHO05D005596 4.9e-16 89.7 95 48.4
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 6.3e-16 89.4 83 50.6
QL01p004071 Quercus lobata HOM05D004673 ORTHO05D005596 8.3e-16 89.0 93 47.3
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 1.1e-15 88.6 83 50.6
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 1.4e-15 88.2 95 45.3
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 1.4e-15 88.2 95 45.3
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 1.4e-15 88.2 77 57.1
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 4.1e-15 86.7 77 54.5
QL01p016358 Quercus lobata HOM05D004673 ORTHO05D005596 4.1e-15 86.7 101 42.6
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 5.4e-15 86.3 97 47.4
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 9.2e-15 85.5 95 45.3
QL01p016345 Quercus lobata HOM05D004673 ORTHO05D005596 9.2e-15 85.5 100 44.0
MELO3C015573.2 Cucumis melo HOM05D004673 ORTHO05D005596 1.6e-14 84.7 83 50.6
ECA233G4672 Erigeron canadensis HOM05D004673 ORTHO05D005596 1.6e-14 84.7 75 53.3
MBI11_g31283_MAGBIO Magnolia biondii HOM05D004151 ORTHO05D004775 1.6e-14 84.7 108 42.6
CsaV3_1G041620 Cucumis sativus L. HOM05D004673 ORTHO05D005596 2.7e-14 84.0 83 50.6
COL.COLO4_13601 Corchorus olitorius HOM05D000750 ORTHO05D000714 3.5e-14 83.6 94 41.5
HanXRQChr13g0405741 Helianthus annuus HOM05D004673 ORTHO05D005596 5.9e-14 82.8 75 54.7
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 7.8e-14 82.4 92 42.4
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 7.8e-14 82.4 99 48.5
Thecc.05G294400 Theobroma cacao HOM05D004673 ORTHO05D005596 7.8e-14 82.4 92 42.4
HanXRQChr13g0405711 Helianthus annuus HOM05D004673 ORTHO05D005596 1.3e-13 81.6 75 52.0
HanXRQChr07g0187111 Helianthus annuus HOM05D004673 ORTHO05D005596 2.9e-13 80.5 75 53.3
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 2.9e-13 80.5 95 41.1
COL.COLO4_13599 Corchorus olitorius HOM05D004673 ORTHO05D005596 3.8e-13 80.1 92 41.3
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 3.8e-13 80.1 48 77.1
Dinv00554 Davidia involucrata HOM05D004673 ORTHO05D005596 6.6e-13 79.3 93 45.2
QL01p004480 Quercus lobata HOM05D004673 ORTHO05D005596 6.6e-13 79.3 95 43.2
DCAR_030099 Daucus carota HOM05D004673 ORTHO05D005596 8.6e-13 79.0 95 46.3
HanXRQChr07g0187551 Helianthus annuus HOM05D004673 ORTHO05D005596 1.1e-12 78.6 75 53.3
Cpa.g.sc1158.1 Carica papaya HOM05D004673 ORTHO05D005596 1.5e-12 78.2 79 44.3
QL01p003522 Quercus lobata HOM05D000182 ORTHO05D005596 1.5e-12 78.2 83 45.8
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 1.9e-12 77.8 99 42.4
Gohir.A11G259500 Gossypium hirsutum HOM05D004673 ORTHO05D005596 1.9e-12 77.8 93 41.9
Cpa.g.c34637 Carica papaya HOM05D004673 ORTHO05D005596 2.5e-12 77.4 89 40.4
QL01p004463 Quercus lobata HOM05D004673 ORTHO05D005596 4.3e-12 76.6 75 52.0
QL08p003638 Quercus lobata HOM05D004673 ORTHO05D005596 5.6e-12 76.3 94 44.7
Dinv09263 Davidia involucrata HOM05D004673 ORTHO05D005596 9.5e-12 75.5 48 70.8
BcaB04g19351 Brassica carinata HOM05D004673 ORTHO05D005596 2.1e-11 74.3 101 40.6
C03p40670 Brassica napus HOM05D004673 ORTHO05D005596 2.1e-11 74.3 101 40.6
COL.COLO4_13600 Corchorus olitorius HOM05D004673 ORTHO05D005596 4.7e-11 73.2 87 41.4
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 4.7e-11 73.2 87 41.4
EL10Ac3g06819 Beta vulgaris HOM05D004673 ORTHO05D005596 6.1e-11 72.8 88 40.9
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 6.1e-11 72.8 98 39.8
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 8.0e-11 72.4 48 70.8
QL08p003602 Quercus lobata HOM05D004673 ORTHO05D005596 3.0e-10 70.5 80 45.0
Ciclev10024612m.g Citrus clementina HOM05D004673 ORTHO05D005596 5.2e-10 69.7 93 39.8
Ciclev10018053m.g Citrus clementina HOM05D004673 ORTHO05D005596 6.8e-10 69.3 48 70.8
Aa31LG5G14520 Aethionema arabicum HOM05D004673 ORTHO05D005596 8.9e-10 68.9 48 64.6
BraA03t12522Z Brassica rapa HOM05D004673 ORTHO05D005596 8.9e-10 68.9 101 37.6
Dinv00553 Davidia involucrata HOM05D004673 ORTHO05D005596 8.9e-10 68.9 79 46.8
GSVIVG01025484001 Vitis vinifera HOM05D004673 ORTHO05D005596 1.5e-09 68.2 48 68.8
A03p33470 Brassica napus HOM05D004673 ORTHO05D005596 7.5e-09 65.9 101 36.6
DCAR_030125 Daucus carota HOM05D004673 ORTHO05D005596 7.5e-09 65.9 41 70.7
Carub.0003s0318 Capsella rubella HOM05D004673 ORTHO05D005596 9.8e-09 65.5 88 36.4
A09p18980 Brassica napus HOM05D004673 ORTHO05D005596 1.7e-08 64.7 48 58.3
BraA09t37516Z Brassica rapa HOM05D004673 ORTHO05D005596 1.7e-08 64.7 48 58.3
Gorai.007G289600 Gossypium raimondii HOM05D004673 ORTHO05D005596 1.7e-08 64.7 73 39.7
ECA233G2517 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-08 64.3 48 62.5
MBI11_g38090_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 2.2e-08 64.3 45 66.7
CARHR078050 Cardamine hirsuta HOM05D004673 ORTHO05D005596 2.9e-08 63.9 91 38.5
Thhalv10027707m.g Eutrema salsugineum HOM05D004673 ORTHO05D005596 2.9e-08 63.9 43 65.1
ECA240G1657 Erigeron canadensis HOM05D004673 ORTHO05D005596 4.9e-08 63.2 45 62.2
QL01p004727 Quercus lobata HOM05D004673 ORTHO05D005596 4.9e-08 63.2 48 58.3
DCAR_030113 Daucus carota HOM05D004673 ORTHO05D005596 8.3e-08 62.4 48 60.4
BcaC04g22073 Brassica carinata HOM05D000897 ORTHO05D000716 1.1e-07 62.0 48 56.2
C09p23810 Brassica napus HOM05D004673 ORTHO05D005596 1.1e-07 62.0 48 56.2
DCAR_030126 Daucus carota HOM05D004673 ORTHO05D005596 1.4e-07 61.6 56 53.6
BolC3t16332H Brassica oleracea HOM05D004673 ORTHO05D005596 1.9e-07 61.2 81 38.3
DCAR_030116 Daucus carota HOM05D004673 ORTHO05D005596 1.9e-07 61.2 48 58.3
DCAR_030115 Daucus carota HOM05D004673 ORTHO05D005596 2.4e-07 60.8 42 66.7
HanXRQChr07g0187121 Helianthus annuus HOM05D004673 ORTHO05D005596 2.4e-07 60.8 45 62.2
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 4.1e-07 60.1 110 33.6
THA.LOC104816064 Tarenaya hassleriana HOM05D004673 ORTHO05D005596 4.1e-07 60.1 49 53.1
GSVIVG01025479001 Vitis vinifera HOM05D004673 ORTHO05D005596 4.1e-07 60.1 48 62.5
HPP92_013962 Vanilla planifolia HOM05D004673 ORTHO05D005596 5.4e-07 59.7 83 36.1
Cc11_g07420 Coffea canephora HOM05D000071 ORTHO05D000029 2.0e-06 57.8 66 40.9
BcaB07g31134 Brassica carinata HOM05D004673 ORTHO05D005596 2.7e-06 57.4 97 35.1
Manes.03G086903 Manihot esculenta HOM05D004673 ORTHO05D005596 2.7e-06 57.4 48 60.4
Dinv26343 Davidia involucrata HOM05D000071 ORTHO05D000029 3.5e-06 57.0 66 36.4
ATR0697G215 Amborella trichopoda HOM05D004673 ORTHO05D005596 6.0e-06 56.2 71 46.5
AL3G13020 Arabidopsis lyrata HOM05D004673 ORTHO05D005596 6.0e-06 56.2 48 52.1


User provided reference genes

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