Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P521T7 Lonicera japonica HOM05D004673 ORTHO05D005596 2.6e-66 256.1 186 100.0
Actinidia00906 Actinidia chinensis HOM05D004673 ORTHO05D005596 5.2e-19 99.0 60 75.0
DCAR_030109 Daucus carota HOM05D004673 ORTHO05D005596 1.4e-16 90.9 59 72.9
Cc01_g00160 Coffea canephora HOM05D004673 ORTHO05D005596 1.9e-16 90.5 59 71.2
DCAR_030099 Daucus carota HOM05D004673 ORTHO05D005596 5.4e-16 89.0 60 71.7
Sabra01G0002300 Salix brachista HOM05D004673 ORTHO05D005596 7.1e-16 88.6 61 68.9
Nitab4.5_0000551g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 3.5e-15 86.3 60 66.7
Nitab4.5_0006195g0010 Nicotiana tabacum HOM05D004673 ORTHO05D005596 3.5e-15 86.3 60 66.7
Ciclev10018053m.g Citrus clementina HOM05D004673 ORTHO05D005596 4.6e-15 85.9 58 69.0
ClCG03G014570 Citrullus lanatus HOM05D004673 ORTHO05D005596 1.0e-14 84.7 58 63.8
DCAR_030118 Daucus carota HOM05D004673 ORTHO05D005596 6.6e-14 82.0 60 65.0
DCAR_030119 Daucus carota HOM05D004673 ORTHO05D005596 9.6e-13 78.2 62 67.7
AUR62032055 Chenopodium quinoa HOM05D004673 ORTHO05D005596 2.1e-12 77.0 59 61.0
Atru.chr1.2923 Acer truncatum HOM05D004673 ORTHO05D005596 3.6e-12 76.3 61 59.0
Peaxi162Scf00705g00063 Petunia axillaris HOM05D004673 ORTHO05D005596 3.1e-11 73.2 60 60.0
AUR62032689 Chenopodium quinoa HOM05D000750 ORTHO05D000714 1.2e-10 71.2 59 57.6
Manes.03G086906 Manihot esculenta HOM05D004673 ORTHO05D005596 2.0e-10 70.5 59 57.6
DCAR_032195 Daucus carota HOM05D004673 ORTHO05D005596 3.4e-10 69.7 40 80.0
Potri.001G003200 Populus trichocarpa HOM05D004673 ORTHO05D005596 1.3e-09 67.8 60 55.0
CsaV3_1G041610 Cucumis sativus L. HOM05D004673 ORTHO05D005596 1.7e-09 67.4 57 54.4
Dinv13478 Davidia involucrata HOM05D004673 ORTHO05D005596 1.7e-09 67.4 39 79.5
Lsat_1_v5_gn_6_55581 Lactuca sativa HOM05D004673 ORTHO05D005596 2.2e-09 67.0 41 75.6
GSVIVG01025484001 Vitis vinifera HOM05D004673 ORTHO05D005596 2.2e-09 67.0 195 36.4
CAN.G1834.13 Capsicum annuum HOM05D004673 ORTHO05D005596 3.8e-09 66.2 59 55.9
DCAR_013113 Daucus carota HOM05D004673 ORTHO05D005596 4.9e-09 65.9 56 58.9
TAR623G1034 Trochodendron aralioides HOM05D004673 ORTHO05D005596 4.9e-09 65.9 41 73.2
Lsat_1_v5_gn_1_25861 Lactuca sativa HOM05D004673 ORTHO05D005596 1.4e-08 64.3 61 57.4
MBI11_g31285_MAGBIO Magnolia biondii HOM05D004673 ORTHO05D005596 1.4e-08 64.3 60 50.0
Prupe.7G003900 Prunus persica HOM05D004673 ORTHO05D005596 2.4e-08 63.5 60 51.7
Actinidia16240 Actinidia chinensis HOM05D004673 ORTHO05D005596 1.2e-07 61.2 44 63.6
MELO3C015571.2 Cucumis melo HOM05D004673 ORTHO05D005596 1.2e-07 61.2 57 50.9
Hma1.2p1_0589F.1_g184830 Hydrangea macrophylla HOM05D004673 ORTHO05D005596 1.2e-07 61.2 38 78.9
ECA233G4485 Erigeron canadensis HOM05D004673 ORTHO05D005596 2.1e-07 60.5 51 54.9
QL02p096023 Quercus lobata HOM05D004673 ORTHO05D005596 2.7e-07 60.1 61 42.6
Lsat_1_v5_gn_6_53540 Lactuca sativa HOM05D004673 ORTHO05D005596 3.5e-07 59.7 46 58.7
CARHR253280 Cardamine hirsuta HOM05D004673 ORTHO05D005596 4.6e-07 59.3 52 50.0
DCAR_030108 Daucus carota HOM05D004673 ORTHO05D005596 7.9e-07 58.5 50 56.0
Carub.0006s3213 Capsella rubella HOM05D004673 ORTHO05D005596 1.3e-06 57.8 60 45.0
Aqoxy1G00488 Aquilegia oxysepala HOM05D004673 ORTHO05D005596 2.3e-06 57.0 41 61.0
DCAR_030114 Daucus carota HOM05D004673 ORTHO05D005596 2.3e-06 57.0 41 63.4
Lsat_1_v5_gn_6_55380 Lactuca sativa HOM05D004673 ORTHO05D005596 3.9e-06 56.2 41 61.0
TWI60G0809 Tripterygium wilfordii HOM05D004673 ORTHO05D005596 3.9e-06 56.2 36 66.7
CANSAT11G1431 Cannabis sativa HOM05D004673 ORTHO05D005596 6.6e-06 55.5 40 57.5
CARHR219700 Cardamine hirsuta HOM05D000053 ORTHO05D000035 8.7e-06 55.1 185 25.4
DCAR_030101 Daucus carota HOM05D004673 ORTHO05D005596 8.7e-06 55.1 41 58.5


User provided reference genes

Program Settings