Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P486T7 Lonicera japonica HOM05D012321 ORTHO05D012493 7.3e-37 156.8 82 100.0
Lj1P491T19 Lonicera japonica HOM05D012321 ORTHO05D012493 1.1e-27 126.3 78 87.2
Lj1P488T10 Lonicera japonica HOM05D012321 ORTHO05D012493 6.9e-27 123.6 78 87.2
Lju3616P0T7 Lonicera japonica HOM05D012321 ORTHO05D012493 2.1e-23 112.1 65 89.2
Lj1P505T14 Lonicera japonica HOM05D012321 ORTHO05D012493 4.6e-23 110.9 65 89.2
Lj4P488T6 Lonicera japonica HOM05D012321 ORTHO05D012493 1.4e-19 99.4 82 68.3
Lj4P485T6 Lonicera japonica HOM05D012321 ORTHO05D012493 1.2e-18 96.3 82 67.1
Lj3A423G38 Lonicera japonica HOM05D012321 ORTHO05D012493 9.6e-13 76.6 82 57.3
Lj4A129T110 Lonicera japonica HOM05D012321 ORTHO05D012493 9.6e-13 76.6 80 51.2
Lj3A423G37 Lonicera japonica HOM05D012321 ORTHO05D012493 2.1e-12 75.5 82 57.3
Lj3A423G34 Lonicera japonica HOM05D012321 ORTHO05D012493 4.8e-12 74.3 82 56.1
Dinv15562 Davidia involucrata HOM05D000312 ORTHO05D000221 2.0e-10 68.9 80 46.2
Lsat_1_v5_gn_1_81120 Lactuca sativa HOM05D000312 ORTHO05D000221 2.0e-10 68.9 80 46.2
Cc11_g11160 Coffea canephora HOM05D000312 ORTHO05D000221 4.5e-10 67.8 81 45.7
Lj3A423G35 Lonicera japonica HOM05D012321 ORTHO05D012493 5.8e-10 67.4 82 52.4
HanXRQChr01g0018881 Helianthus annuus HOM05D000312 ORTHO05D000221 1.0e-09 66.6 80 43.8
Lj4A488T7 Lonicera japonica HOM05D012321 ORTHO05D012493 1.0e-09 66.6 57 66.7
Nitab4.5_0006592g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.0e-09 66.6 70 48.6
Lsat_1_v5_gn_1_80360 Lactuca sativa HOM05D000312 ORTHO05D000221 1.7e-09 65.9 80 45.0
Nitab4.5_0012426g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.2e-09 65.5 74 43.2
Cc05_g01220 Coffea canephora HOM05D000312 ORTHO05D000221 8.4e-09 63.5 68 48.5
Lsat_1_v5_gn_1_81361 Lactuca sativa HOM05D000312 ORTHO05D000221 8.4e-09 63.5 80 43.8
Cc11_g11170 Coffea canephora HOM05D000312 ORTHO05D000221 1.1e-08 63.2 81 44.4
HanXRQChr12g0373691 Helianthus annuus HOM05D000312 ORTHO05D000221 1.4e-08 62.8 80 40.0
Dinv16565 Davidia involucrata HOM05D000312 ORTHO05D000221 1.9e-08 62.4 73 47.9
Dinv27405 Davidia involucrata HOM05D000312 ORTHO05D000221 1.9e-08 62.4 76 43.4
Lsat_1_v5_gn_1_81180 Lactuca sativa HOM05D000312 ORTHO05D000221 2.5e-08 62.0 80 43.8
Hma1.2p1_0148F.1_g066000 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 3.2e-08 61.6 78 44.9
Sopen04g013320 Solanum pennellii HOM05D000004 ORTHO05D000002 3.2e-08 61.6 69 47.8
CSS0007927 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 5.5e-08 60.8 80 42.5
HanXRQChr01g0019091 Helianthus annuus HOM05D000312 ORTHO05D000221 7.1e-08 60.5 80 40.0
Lsat_1_v5_gn_1_81001 Lactuca sativa HOM05D000312 ORTHO05D000221 7.1e-08 60.5 73 42.5
Nitab4.5_0000913g0170 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.1e-08 60.5 81 38.3
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 1.2e-07 59.7 79 40.5
Nitab4.5_0001840g0070 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.2e-07 59.7 72 44.4
CSS0046143 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.6e-07 59.3 80 41.2
HanXRQChr01g0017811 Helianthus annuus HOM05D000312 ORTHO05D000221 1.6e-07 59.3 71 46.5
Dinv15563 Davidia involucrata HOM05D000312 ORTHO05D000221 2.1e-07 58.9 74 44.6
HanXRQChr01g0019081 Helianthus annuus HOM05D000312 ORTHO05D000221 2.1e-07 58.9 80 41.2
Lsat_1_v5_gn_1_75200 Lactuca sativa HOM05D000312 ORTHO05D000221 2.1e-07 58.9 72 44.4
Dinv16568 Davidia involucrata HOM05D001046 ORTHO05D000221 2.7e-07 58.5 74 44.6
Nitab4.5_0004688g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 2.7e-07 58.5 81 39.5
Rhsim12G0069100 Rhododendron simsii HOM05D000312 ORTHO05D000221 2.7e-07 58.5 78 38.5
Lsat_1_v5_gn_1_81421 Lactuca sativa HOM05D000312 ORTHO05D012493 3.5e-07 58.2 80 41.2
Nitab4.5_0022094g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.5e-07 58.2 79 39.2
Peaxi162Scf00015g00635 Petunia axillaris HOM05D000312 ORTHO05D000221 3.5e-07 58.2 76 44.7
Rhsim12G0069300 Rhododendron simsii HOM05D000312 ORTHO05D000221 3.5e-07 58.2 78 38.5
Thecc.02G317400 Theobroma cacao HOM05D000312 ORTHO05D000221 3.5e-07 58.2 79 41.8
Lsat_1_v5_gn_1_81061 Lactuca sativa HOM05D000312 ORTHO05D012493 4.6e-07 57.8 73 43.8
Nitab4.5_0000259g0210 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.1e-07 57.4 79 36.7
Dinv27407 Davidia involucrata HOM05D000312 ORTHO05D000221 1.0e-06 56.6 79 40.5
Dinv34662 Davidia involucrata HOM05D000312 ORTHO05D000221 1.0e-06 56.6 73 45.2
Nitab4.5_0013991g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.3e-06 56.2 73 42.5
Peaxi162Scf00188g00544 Petunia axillaris HOM05D000312 ORTHO05D000221 1.8e-06 55.8 76 39.5
Rhsim12G0069200 Rhododendron simsii HOM05D000312 ORTHO05D012493 1.8e-06 55.8 77 37.7
Sopen05g006560 Solanum pennellii HOM05D000312 ORTHO05D000221 1.8e-06 55.8 79 43.0
Hma1.2p1_0189F.1_g082810 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 2.3e-06 55.5 78 41.0
CAN.G1163.6 Capsicum annuum HOM05D000312 ORTHO05D000221 3.0e-06 55.1 73 43.8
Peaxi162Scf00121g00119 Petunia axillaris HOM05D000312 ORTHO05D000221 3.0e-06 55.1 75 41.3
Rhsim12G0069400 Rhododendron simsii HOM05D000312 ORTHO05D000221 3.0e-06 55.1 78 35.9
PGSC0003DMG400002954 Solanum tuberosum HOM05D000312 ORTHO05D012493 3.0e-06 55.1 74 39.2
CSS0035521 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 5.1e-06 54.3 79 40.5
Nitab4.5_0000027g0320 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.1e-06 54.3 74 40.5
HanXRQChr01g0019051 Helianthus annuus HOM05D000312 ORTHO05D000221 6.7e-06 53.9 67 43.3
Peaxi162Scf00053g00810 Petunia axillaris HOM05D000312 ORTHO05D000221 6.7e-06 53.9 81 34.6
Rhsim12G0066900 Rhododendron simsii HOM05D000312 ORTHO05D000221 6.7e-06 53.9 78 41.0
Lsat_1_v5_gn_1_81541 Lactuca sativa HOM05D000312 ORTHO05D000221 8.7e-06 53.5 69 43.5
Peaxi162Scf00121g00023 Petunia axillaris HOM05D000312 ORTHO05D000221 8.7e-06 53.5 70 41.4
Hund25126 Selenicereus undatus HOM05D000312 ORTHO05D000221 8.7e-06 53.5 81 34.6


User provided reference genes

Program Settings