Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P303T22 Lonicera japonica HOM05D023306 ORTHO05D002052 6.7e-125 450.7 224 100.0
Lj1C294T11 Lonicera japonica HOM05D023306 ORTHO05D012721 1.1e-119 433.3 224 96.4
Lj1A303T25 Lonicera japonica HOM05D037926 ORTHO05D012721 1.9e-39 166.8 166 54.8
CAN.G1463.1 Capsicum annuum HOM05D002687 ORTHO05D002065 1.3e-16 90.9 167 36.5
Sopen06g030470 Solanum pennellii HOM05D002687 ORTHO05D002052 2.3e-16 90.1 165 34.5
PGSC0003DMG400005897 Solanum tuberosum HOM05D002687 ORTHO05D002052 6.7e-16 88.6 165 34.5
Solyc06g074050.3 Solanum lycopersicum HOM05D002687 ORTHO05D002052 8.7e-16 88.2 165 33.9
PGSC0003DMG400019632 Solanum tuberosum HOM05D002687 ORTHO05D002052 1.9e-15 87.0 165 34.5
TAR633G0261 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.5e-15 86.7 165 33.3
Solyc11g068900.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 7.4e-15 85.1 165 33.3
Sopen11g027610 Solanum pennellii HOM05D002687 ORTHO05D002052 7.4e-15 85.1 165 33.3
Lj1A303T24 Lonicera japonica HOM05D023306 ORTHO05D012721 1.3e-14 84.3 102 48.0
Nitab4.5_0000380g0140 Nicotiana tabacum HOM05D002687 ORTHO05D002052 3.7e-14 82.8 167 33.5
TAR633G0472 Trochodendron aralioides HOM05D002687 ORTHO05D002052 4.8e-14 82.4 164 31.7
Actinidia07275 Actinidia chinensis HOM05D002687 ORTHO05D002052 6.3e-14 82.0 164 36.0
TAR623G1724 Trochodendron aralioides HOM05D002687 ORTHO05D002052 6.3e-14 82.0 168 34.5
TAR623G0011 Trochodendron aralioides HOM05D002687 ORTHO05D002052 1.1e-13 81.3 168 33.9
Nitab4.5_0000657g0070 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.4e-13 80.9 170 32.9
Dinv08137 Davidia involucrata HOM05D002687 ORTHO05D002052 2.4e-13 80.1 163 35.0
Nitab4.5_0000893g0110 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.2e-12 77.8 165 31.5
Nitab4.5_0000158g0010 Nicotiana tabacum HOM05D002687 ORTHO05D002052 1.5e-12 77.4 165 31.5
TAR369G0448 Trochodendron aralioides HOM05D002687 ORTHO05D002052 2.6e-12 76.6 165 30.9
Cfa009948 Carpinus fangiana HOM05D002687 ORTHO05D002052 4.5e-12 75.9 164 31.7
PSO339G2661 Papaver somniferum HOM05D002687 ORTHO05D002052 4.5e-12 75.9 161 28.6
Rhsim13G0195600 Rhododendron simsii HOM05D002687 ORTHO05D002052 5.9e-12 75.5 169 32.0
PSO384G1068 Papaver somniferum HOM05D002687 ORTHO05D002052 7.7e-12 75.1 161 29.8
TAR633G1301 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.7e-12 75.1 169 30.2
Hma1.2p1_0097F.1_g048090 Hydrangea macrophylla HOM05D002687 ORTHO05D002052 1.0e-11 74.7 144 31.2
CiPaw.13G131000 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.3e-11 74.3 161 30.4
DCAR_010643 Daucus carota HOM05D002687 ORTHO05D002052 1.3e-11 74.3 152 30.3
CSS0030865 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 2.2e-11 73.6 162 30.2
CSS0032031 Camellia sinensis var. sinensis HOM05D002687 ORTHO05D002052 2.2e-11 73.6 162 30.2
Nn2g14281 Nelumbo nucifera HOM05D002687 ORTHO05D002052 2.9e-11 73.2 167 28.7
Dinv17088 Davidia involucrata HOM05D002687 ORTHO05D002052 3.8e-11 72.8 165 33.3
FAN11G1248 Fragaria x ananassa HOM05D002687 ORTHO05D002052 6.5e-11 72.0 163 30.1
TAR636G1837 Trochodendron aralioides HOM05D002687 ORTHO05D002052 8.5e-11 71.6 175 29.7
FvH4_3g26690 Fragaria vesca HOM05D002687 ORTHO05D002052 1.1e-10 71.2 161 30.4
Dinv35090 Davidia involucrata HOM05D000957 ORTHO05D000754 1.4e-10 70.9 165 30.9
Medtr2g087000 Medicago truncatula HOM05D002687 ORTHO05D002052 1.4e-10 70.9 164 28.0
CiPaw.09G020300 Carya illinoinensis HOM05D002687 ORTHO05D002052 1.9e-10 70.5 121 34.7
QL01p011302 Quercus lobata HOM05D002687 ORTHO05D002052 1.9e-10 70.5 142 30.3
Lj1C262G4 Lonicera japonica HOM05D002687 ORTHO05D002052 2.5e-10 70.1 163 30.7
CiPaw.14G096100 Carya illinoinensis HOM05D002687 ORTHO05D002052 3.2e-10 69.7 164 29.3
CANSAT54G2775 Cannabis sativa HOM05D002687 ORTHO05D002052 5.5e-10 68.9 144 31.2
Rhsim01G0201900 Rhododendron simsii HOM05D002687 ORTHO05D002052 5.5e-10 68.9 164 28.7
Nn6g34716 Nelumbo nucifera HOM05D002687 ORTHO05D002052 7.2e-10 68.6 164 28.0
TAR636G0437 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.2e-10 68.6 165 29.7
TAR636G3204 Trochodendron aralioides HOM05D002687 ORTHO05D002052 7.2e-10 68.6 165 29.7
Haze_23313 Corylus avellana HOM05D002687 ORTHO05D002052 1.2e-09 67.8 164 30.5
BcaC02g10865 Brassica carinata HOM05D002687 ORTHO05D002052 2.7e-09 66.6 155 29.0
C04p24310 Brassica napus HOM05D002687 ORTHO05D002052 2.7e-09 66.6 155 29.0
BolC4t23929H Brassica oleracea HOM05D002687 ORTHO05D002052 2.7e-09 66.6 155 29.0
ECA238G0184 Erigeron canadensis HOM05D002687 ORTHO05D002052 3.6e-09 66.2 168 31.0
Lsat_1_v5_gn_3_114060 Lactuca sativa HOM05D002687 ORTHO05D002052 3.6e-09 66.2 167 28.1
TAR636G0890 Trochodendron aralioides HOM05D002687 ORTHO05D002052 3.6e-09 66.2 161 29.2
Carub.0001s0701 Capsella rubella HOM05D002687 ORTHO05D002052 4.6e-09 65.9 141 31.9
FAN16G1005 Fragaria x ananassa HOM05D002687 ORTHO05D002052 6.1e-09 65.5 161 29.2
TWI79G0900 Tripterygium wilfordii HOM05D002687 ORTHO05D002052 6.1e-09 65.5 165 30.9
Actinidia24248 Actinidia chinensis HOM05D023306 ORTHO05D012721 7.9e-09 65.1 146 32.9
CiPaw.10G094600 Carya illinoinensis HOM05D002687 ORTHO05D002052 7.9e-09 65.1 124 33.1
FAN21G1704 Fragaria x ananassa HOM05D002687 ORTHO05D002052 7.9e-09 65.1 161 29.8
AUR62023990 Chenopodium quinoa HOM05D002687 ORTHO05D002052 1.0e-08 64.7 163 28.8
EL10Ac7g16313 Beta vulgaris HOM05D002687 ORTHO05D002052 1.4e-08 64.3 165 29.1
Prupe.7G096700 Prunus persica HOM05D010052 ORTHO05D010666 1.8e-08 63.9 173 28.3
Cc01_g08570 Coffea canephora HOM05D002687 ORTHO05D002052 2.3e-08 63.5 166 28.9
Solyc11g068893.1 Solanum lycopersicum HOM05D002687 ORTHO05D002052 2.3e-08 63.5 149 28.9
COL.COLO4_22662 Corchorus olitorius HOM05D002687 ORTHO05D002052 3.0e-08 63.2 159 27.0
AUR62031792 Chenopodium quinoa HOM05D002687 ORTHO05D002052 3.9e-08 62.8 164 29.9
Aa31LG5G8690 Aethionema arabicum HOM05D002687 ORTHO05D002052 6.7e-08 62.0 158 26.6
Sp4g10070 Schrenkiella parvula HOM05D002687 ORTHO05D002052 6.7e-08 62.0 146 28.8
Prupe.6G142400 Prunus persica HOM05D002687 ORTHO05D002052 8.8e-08 61.6 167 32.3
Eucgr.J00544 Eucalyptus grandis HOM05D002687 ORTHO05D002052 1.1e-07 61.2 163 30.1
SGA_v2.0_scaffold100G29631 Striga asiatica HOM05D002687 ORTHO05D002052 1.1e-07 61.2 160 28.8
MBI01_g04539_MAGBIO Magnolia biondii HOM05D002687 ORTHO05D002052 1.5e-07 60.8 161 28.6
THA.LOC104826444 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 1.5e-07 60.8 155 23.9
MD03G1153500 Malus domestica HOM05D002687 ORTHO05D002052 2.0e-07 60.5 163 30.1
Ah.15g100060 Amaranthus hybridus HOM05D002687 ORTHO05D002052 2.6e-07 60.1 162 28.4
AL4G21170 Arabidopsis lyrata HOM05D002687 ORTHO05D002052 2.6e-07 60.1 157 28.7
FvH4_5g22901 Fragaria vesca HOM05D010052 ORTHO05D010666 2.6e-07 60.1 139 28.8
RcHm_v2.0_Chr7g0211331 Rosa chinensis HOM05D010052 ORTHO05D010666 2.6e-07 60.1 162 27.8
HanXRQChr12g0382031 Helianthus annuus HOM05D002687 ORTHO05D002052 3.3e-07 59.7 167 29.3
RcHm_v2.0_Chr7g0211341 Rosa chinensis HOM05D010052 ORTHO05D010666 3.3e-07 59.7 112 33.9
FAN04G3011 Fragaria x ananassa HOM05D010052 ORTHO05D010666 4.4e-07 59.3 174 24.7
FAN13G1417 Fragaria x ananassa HOM05D010052 ORTHO05D010666 4.4e-07 59.3 139 28.1
THA.LOC104800513 Tarenaya hassleriana HOM05D002687 ORTHO05D002052 4.4e-07 59.3 146 26.0
Dinv43288 Davidia involucrata HOM05D022454 ORTHO05D015080 7.4e-07 58.5 139 30.2
Lj1P294T15 Lonicera japonica HOM05D023306 ORTHO05D012721 7.4e-07 58.5 65 50.8
MD12G1038800 Malus domestica HOM05D002687 ORTHO05D002052 7.4e-07 58.5 118 32.2
Thhalv10002076m.g Eutrema salsugineum HOM05D002687 ORTHO05D002052 9.7e-07 58.2 153 26.1
MD00G1129000 Malus domestica HOM05D002687 ORTHO05D002052 9.7e-07 58.2 163 30.1
Phvul.001G195100 Phaseolus vulgaris HOM05D008136 ORTHO05D002052 9.7e-07 58.2 163 26.4
RcHm_v2.0_Chr5g0073621 Rosa chinensis HOM05D010052 ORTHO05D010666 9.7e-07 58.2 139 27.3
FAN18G3409 Fragaria x ananassa HOM05D010052 ORTHO05D010666 1.3e-06 57.8 138 28.3
Prupe.7G097000 Prunus persica HOM05D002687 ORTHO05D002052 1.3e-06 57.8 118 32.2
AT2G27260 Arabidopsis thaliana HOM05D002687 ORTHO05D002052 1.7e-06 57.4 141 28.4
BcaB02g10079 Brassica carinata HOM05D002687 ORTHO05D002052 1.7e-06 57.4 155 26.5
ATR0772G197 Amborella trichopoda HOM05D002687 ORTHO05D002052 2.2e-06 57.0 157 28.0
FvH4_6g41370 Fragaria vesca HOM05D017088 ORTHO05D012721 2.2e-06 57.0 169 26.6
Lalb_Chr14g0376011 Lupinus albus HOM05D002687 ORTHO05D002052 2.2e-06 57.0 145 24.1
MBI07_g02012_MAGBIO Magnolia biondii HOM05D037926 ORTHO05D012721 2.2e-06 57.0 109 31.2
Potri.001G218300 Populus trichocarpa HOM05D002687 ORTHO05D002052 2.2e-06 57.0 161 27.3
Thecc.02G080300 Theobroma cacao HOM05D017494 ORTHO05D020490 2.2e-06 57.0 147 25.9
Dinv31534 Davidia involucrata HOM05D002687 ORTHO05D002052 2.8e-06 56.6 152 28.9
MD14G1037800 Malus domestica HOM05D010052 ORTHO05D010666 2.8e-06 56.6 177 24.3
Potri.009G019800 Populus trichocarpa HOM05D002687 ORTHO05D002052 2.8e-06 56.6 165 29.1
Ca_01639_v3 Cicer arietinum L. HOM05D002687 ORTHO05D002052 3.7e-06 56.2 164 25.0
Migut.N02460 Erythranthe guttata HOM05D002687 ORTHO05D002052 3.7e-06 56.2 160 28.8
FAN18G4184 Fragaria x ananassa HOM05D003158 ORTHO05D003560 3.7e-06 56.2 138 27.5
Prupe.7G048100 Prunus persica HOM05D010052 ORTHO05D010666 3.7e-06 56.2 151 25.8
MD12G1087900 Malus domestica HOM05D010052 ORTHO05D010666 4.8e-06 55.8 149 24.8
Cfa016687 Carpinus fangiana HOM05D008136 ORTHO05D002052 6.3e-06 55.5 169 28.4
RcHm_v2.0_Chr2g0156911 Rosa chinensis HOM05D017088 ORTHO05D012721 6.3e-06 55.5 168 26.8
FAN05G3157 Fragaria x ananassa HOM05D017088 ORTHO05D012721 8.2e-06 55.1 169 26.6
MD14G1037500 Malus domestica HOM05D002687 ORTHO05D002052 8.2e-06 55.1 120 30.0


User provided reference genes

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