Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P141T46 Lonicera japonica HOM05D005325 ORTHO05D008457 1.4e-89 332.8 157 100.0
Dinv28619 Davidia involucrata HOM05D005325 ORTHO05D008457 3.3e-70 268.5 154 77.3
CSS0007520 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 6.2e-69 264.2 157 76.4
CSS0011737 Camellia sinensis var. sinensis HOM05D005325 ORTHO05D008457 6.2e-69 264.2 157 76.4
DCAR_007389 Daucus carota HOM05D005325 ORTHO05D008457 2.2e-66 255.8 153 76.5
Actinidia25148 Actinidia chinensis HOM05D005325 ORTHO05D008457 1.1e-65 253.4 156 73.1
Oeu019913.1 Olea europaea HOM05D005325 ORTHO05D008457 4.2e-65 251.5 156 72.4
vmacro02986 Vaccinium macrocarpon HOM05D005325 ORTHO05D008457 5.5e-65 251.1 153 73.9
Cfa011661 Carpinus fangiana HOM05D005325 ORTHO05D008457 3.5e-64 248.4 156 72.4
Haze_24265 Corylus avellana HOM05D005325 ORTHO05D008457 6.0e-64 247.7 156 72.4
CAN.G700.24 Capsicum annuum HOM05D005325 ORTHO05D008457 7.9e-64 247.3 156 70.5
Rhsim13G0071900 Rhododendron simsii HOM05D005325 ORTHO05D008457 1.3e-63 246.5 153 71.9
Cc01_g13970 Coffea canephora HOM05D005325 ORTHO05D008457 2.3e-63 245.7 156 71.8
MELO3C025867.2 Cucumis melo HOM05D005325 ORTHO05D008457 3.9e-63 245.0 158 69.6
Eucgr.J01937 Eucalyptus grandis HOM05D005325 ORTHO05D008457 4.3e-62 241.5 156 67.9
PGSC0003DMG400020866 Solanum tuberosum HOM05D005325 ORTHO05D008457 5.7e-62 241.1 156 68.6
MSTRG.18491 Avicennia marina HOM05D005325 ORTHO05D008457 9.7e-62 240.4 156 71.8
Prupe.6G060500 Prunus persica HOM05D005325 ORTHO05D008457 9.7e-62 240.4 156 68.6
ECA248G3745 Erigeron canadensis HOM05D005325 ORTHO05D008457 1.3e-61 240.0 154 70.1
TAR636G1969 Trochodendron aralioides HOM05D005325 ORTHO05D008457 2.8e-61 238.8 155 69.7
QL01p037417 Quercus lobata HOM05D005325 ORTHO05D008457 3.7e-61 238.4 155 71.6
TWI31G1198 Tripterygium wilfordii HOM05D005325 ORTHO05D008457 3.7e-61 238.4 156 66.0
Hund04885 Selenicereus undatus HOM05D005325 ORTHO05D008457 4.8e-61 238.0 155 69.0
Nitab4.5_0006983g0030 Nicotiana tabacum HOM05D005325 ORTHO05D008457 8.2e-61 237.3 152 71.7
CsaV3_6G016370 Cucumis sativus L. HOM05D005325 ORTHO05D008457 1.1e-60 236.9 158 67.7
Nn2g11401 Nelumbo nucifera HOM05D005325 ORTHO05D008457 1.4e-60 236.5 156 68.6
Cpa.g.sc112.50 Carica papaya HOM05D005325 ORTHO05D008457 1.8e-60 236.1 158 68.4
Sed0000838 Sechium edule HOM05D005325 ORTHO05D008457 1.8e-60 236.1 158 67.1
MBI14_g04425_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 9.0e-60 233.8 155 68.4
Nitab4.5_0000408g0140 Nicotiana tabacum HOM05D005325 ORTHO05D008457 9.0e-60 233.8 154 70.1
GSVIVG01024786001 Vitis vinifera HOM05D005325 ORTHO05D008457 2.0e-59 232.6 156 66.7
Ciclev10029368m.g Citrus clementina HOM05D005325 ORTHO05D008457 2.6e-59 232.3 156 67.9
Lsat_1_v5_gn_5_172281 Lactuca sativa HOM05D005325 ORTHO05D008457 2.6e-59 232.3 154 68.2
RcHm_v2.0_Chr5g0068731 Rosa chinensis HOM05D005325 ORTHO05D008457 2.6e-59 232.3 156 65.4
Sc12g0000890 Simmondsia chinensis HOM05D005325 ORTHO05D008457 2.6e-59 232.3 154 68.2
CiPaw.13G080600 Carya illinoinensis HOM05D005325 ORTHO05D008457 4.5e-59 231.5 156 67.9
SGA_v2.0_scaffold8G04497 Striga asiatica HOM05D005325 ORTHO05D008457 5.9e-59 231.1 155 65.8
Migut.D00728 Erythranthe guttata HOM05D005325 ORTHO05D008457 1.7e-58 229.6 154 69.5
Psat2g059320 Pisum sativum HOM05D005325 ORTHO05D008457 1.7e-58 229.6 156 66.0
COL.COLO4_19112 Corchorus olitorius HOM05D005325 ORTHO05D008457 2.9e-58 228.8 156 66.0
Ah.08g220810 Amaranthus hybridus HOM05D005325 ORTHO05D008457 5.0e-58 228.0 153 66.0
AUR62001679 Chenopodium quinoa HOM05D005325 ORTHO05D008457 5.0e-58 228.0 157 67.5
Ca_05587_v3 Cicer arietinum L. HOM05D005325 ORTHO05D008457 5.0e-58 228.0 157 65.6
Thecc.09G305000 Theobroma cacao HOM05D005325 ORTHO05D008457 5.0e-58 228.0 155 65.2
Sopen09g014710 Solanum pennellii HOM05D005325 ORTHO05D008457 6.5e-58 227.6 156 66.0
TPR.G24020 Trifolium pratense HOM05D005325 ORTHO05D008457 8.5e-58 227.3 158 65.8
AUR62020101 Chenopodium quinoa HOM05D005325 ORTHO05D008457 1.1e-57 226.9 157 67.5
Lalb_Chr04g0252301 Lupinus albus HOM05D005325 ORTHO05D008457 1.1e-57 226.9 157 66.9
FvH4_3g38250 Fragaria vesca HOM05D005325 ORTHO05D008457 1.9e-57 226.1 156 64.1
MD11G1079900 Malus domestica HOM05D005325 ORTHO05D008457 2.5e-57 225.7 155 65.8
Gohir.A05G089800 Gossypium hirsutum HOM05D005325 ORTHO05D008457 3.2e-57 225.3 153 65.4
FAN16G2295 Fragaria x ananassa HOM05D005325 ORTHO05D008457 9.3e-57 223.8 155 63.9
Solyc09g031770.3 Solanum lycopersicum HOM05D005325 ORTHO05D008457 9.3e-57 223.8 156 64.7
Duzib170G0996 Durio zibethinus HOM05D005325 ORTHO05D008457 1.2e-56 223.4 155 63.9
Glyma.02G225500 Glycine max HOM05D005325 ORTHO05D008457 1.2e-56 223.4 155 62.6
PGR119G0476 Punica granatum HOM05D005325 ORTHO05D008457 1.2e-56 223.4 153 64.1
arahy.Tifrunner.gnm1.ann1.VY3BKH Arachis hypogaea HOM05D005325 ORTHO05D008457 1.6e-56 223.0 158 64.6
FAN25G2817 Fragaria x ananassa HOM05D005325 ORTHO05D008457 1.6e-56 223.0 156 64.1
FAN11G0298 Fragaria x ananassa HOM05D005325 ORTHO05D008457 2.1e-56 222.6 156 63.5
Medtr5g069880 Medicago truncatula HOM05D005325 ORTHO05D008457 2.1e-56 222.6 157 63.1
Manes.02G121500 Manihot esculenta HOM05D005325 ORTHO05D008457 3.6e-56 221.9 161 64.6
arahy.Tifrunner.gnm1.ann1.CQ7B2G Arachis hypogaea HOM05D005325 ORTHO05D008457 4.6e-56 221.5 157 64.3
Carub.0004s1073 Capsella rubella HOM05D005325 ORTHO05D008457 4.6e-56 221.5 153 67.3
Potri.001G249400 Populus trichocarpa HOM05D005325 ORTHO05D008457 4.6e-56 221.5 156 63.5
TAR633G2421 Trochodendron aralioides HOM05D005325 ORTHO05D008457 4.6e-56 221.5 150 66.0
Glyma.14G192300 Glycine max HOM05D005325 ORTHO05D008457 6.1e-56 221.1 155 61.3
LjContig00155g0003403 Lotus japonicus HOM05D005325 ORTHO05D008457 7.9e-56 220.7 154 63.6
Sabra16G0151500 Salix brachista HOM05D005325 ORTHO05D008457 1.0e-55 220.3 156 62.8
Peaxi162Scf00116g00163 Petunia axillaris HOM05D005325 ORTHO05D008457 1.3e-55 219.9 158 65.2
Gohir.D05G090700 Gossypium hirsutum HOM05D005325 ORTHO05D008457 1.8e-55 219.5 150 65.3
Gorai.009G093200 Gossypium raimondii HOM05D005325 ORTHO05D008457 1.8e-55 219.5 150 64.7
CANSAT54G0458 Cannabis sativa HOM05D005325 ORTHO05D008457 3.9e-55 218.4 157 65.6
CARHR122960 Cardamine hirsuta HOM05D005325 ORTHO05D008457 1.5e-54 216.5 152 64.5
BcaC02g11048 Brassica carinata HOM05D005325 ORTHO05D008457 1.6e-53 213.0 153 64.1
Duzib168G2216 Durio zibethinus HOM05D005325 ORTHO05D008457 1.6e-53 213.0 156 62.2
Sp4g12350 Schrenkiella parvula HOM05D005325 ORTHO05D008457 1.6e-53 213.0 150 64.0
BolC4t23643H Brassica oleracea HOM05D005325 ORTHO05D008457 2.2e-53 212.6 161 64.0
Aa31LG5G6860 Aethionema arabicum HOM05D005325 ORTHO05D008457 2.8e-53 212.2 152 63.8
AL4G24390 Arabidopsis lyrata HOM05D005325 ORTHO05D008457 3.7e-53 211.8 152 65.1
BcaB02g10271 Brassica carinata HOM05D005325 ORTHO05D008457 3.7e-53 211.8 153 64.7
Phvul.008G262400 Phaseolus vulgaris HOM05D005325 ORTHO05D008457 3.7e-53 211.8 155 60.0
PSO384G1123 Papaver somniferum HOM05D005325 ORTHO05D008457 6.3e-53 211.1 158 61.4
Thhalv10017013m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 1.4e-52 209.9 148 65.5
PSO339G0931 Papaver somniferum HOM05D005325 ORTHO05D008457 2.4e-52 209.1 158 60.8
VMungo0647G2564 Vigna mungo HOM05D005325 ORTHO05D008457 5.3e-52 208.0 155 61.9
Aqoxy4G02653 Aquilegia oxysepala HOM05D005325 ORTHO05D008457 2.0e-51 206.1 155 61.3
unitig_62.g23862 Utricularia gibba HOM05D005325 ORTHO05D008457 2.6e-51 205.7 153 60.1
unitig_64.g29774 Utricularia gibba HOM05D005325 ORTHO05D008457 2.6e-51 205.7 153 60.1
C04p21170 Brassica napus HOM05D005325 ORTHO05D008457 4.5e-51 204.9 153 62.7
Os03g0265200 Oryza sativa ssp. japonica HOM05D005325 ORTHO05D008457 1.0e-50 203.8 155 58.1
Zm00001eb011730 Zea mays HOM05D005325 ORTHO05D008457 1.1e-49 200.3 155 56.1
AT2G29640 Arabidopsis thaliana HOM05D005325 ORTHO05D008457 2.5e-49 199.1 138 65.9
BraA05t20490Z Brassica rapa HOM05D005325 ORTHO05D008457 6.1e-48 194.5 139 65.5
A05p15750 Brassica napus HOM05D005325 ORTHO05D008457 1.4e-47 193.4 139 64.7
EL10Ac7g16130 Beta vulgaris HOM05D005325 ORTHO05D008457 2.3e-47 192.6 153 57.5
BcaB06g28320 Brassica carinata HOM05D005325 ORTHO05D008457 3.9e-47 191.8 152 59.2
A04p22570 Brassica napus HOM05D005325 ORTHO05D008457 1.5e-46 189.9 152 57.9
BolC4t27390H Brassica oleracea HOM05D005325 ORTHO05D008457 2.0e-46 189.5 149 59.7
FAN21G2059 Fragaria x ananassa HOM05D005325 ORTHO05D008457 2.0e-46 189.5 120 67.5
ATR0618G365 Amborella trichopoda HOM05D005325 ORTHO05D008457 6.3e-45 184.5 144 57.6
BraA04t17802Z Brassica rapa HOM05D005325 ORTHO05D008457 2.4e-44 182.6 138 61.6
Thhalv10017876m.g Eutrema salsugineum HOM05D005325 ORTHO05D008457 2.0e-43 179.5 129 62.8
BcaC02g08075 Brassica carinata HOM05D005325 ORTHO05D008457 1.9e-41 172.9 150 57.3
HPP92_015197 Vanilla planifolia HOM05D005325 ORTHO05D008457 5.5e-41 171.4 133 55.6
C04p58710 Brassica napus HOM05D005325 ORTHO05D008457 3.3e-38 162.2 123 60.2
SHI11316 Sapria himalayana HOM05D005325 ORTHO05D008457 2.2e-37 159.5 144 50.7
AagrBONN_evm.TU.Sc2ySwM_362.267 Anthoceros agrestis HOM05D005325 ORTHO05D008457 1.2e-35 153.7 158 43.7
Pp3c13_16720 Physcomitrium patens HOM05D005325 ORTHO05D008457 5.9e-35 151.4 156 44.9
Mapoly0026s0005 Marchantia polymorpha HOM05D005325 ORTHO05D008457 5.0e-34 148.3 152 44.1
AagrBONN_evm.TU.Sc2ySwM_362.272 Anthoceros agrestis HOM05D005325 ORTHO05D008457 6.1e-32 141.4 162 42.6
CDE10G0077 Ceratophyllum demersum HOM05D000561 ORTHO05D000514 2.3e-31 139.4 95 66.3
SMO351G0628 Selaginella moellendorffii HOM05D005325 ORTHO05D008457 1.2e-27 127.1 131 42.7
MBI14_g39232_MAGBIO Magnolia biondii HOM05D005325 ORTHO05D008457 5.2e-23 111.7 106 50.9
ClCG06G015800 Citrullus lanatus HOM05D005325 ORTHO05D008457 2.7e-19 99.4 151 39.7
Aa31LG5G6850 Aethionema arabicum HOM05D005325 ORTHO05D008457 9.8e-14 80.9 59 55.9
Haze_27525 Corylus avellana HOM05D005325 ORTHO05D008457 1.6e-11 73.6 153 30.1
Cre03.g146707 Chlamydomonas reinhardtii HOM05D005325 ORTHO05D008457 2.7e-11 72.8 164 31.1
Atru.chr3.4243 Acer truncatum HOM05D005325 ORTHO05D008457 2.3e-10 69.7 44 72.7
Lsat_1_v5_gn_9_104180 Lactuca sativa HOM05D005325 ORTHO05D024237 7.3e-09 64.7 44 68.2


User provided reference genes

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