Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P137T45 Lonicera japonica HOM05D008126 ORTHO05D000309 2.5e-80 302.0 146 100.0
Lj5P838T14 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-68 260.4 146 88.4
Lj1P1017T43 Lonicera japonica HOM05D008126 ORTHO05D000309 5.4e-67 257.7 146 86.3
Lj2P525T32 Lonicera japonica HOM05D008126 ORTHO05D000309 5.4e-67 257.7 146 86.3
Lj7P745T14 Lonicera japonica HOM05D008126 ORTHO05D000309 5.4e-67 257.7 146 87.7
Lj8P510T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.7e-66 255.4 146 87.7
Lj8P14T13 Lonicera japonica HOM05D008126 ORTHO05D000309 7.3e-64 247.3 146 84.2
Lj9P287T24 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-57 224.6 145 76.6
Lj1P904T2 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-57 223.8 119 90.8
Lj8P545T2 Lonicera japonica HOM05D008126 ORTHO05D000309 3.3e-56 221.9 145 75.2
Lj5P426T12 Lonicera japonica HOM05D008126 ORTHO05D000309 4.3e-56 221.5 145 75.2
Lj5P132T39 Lonicera japonica HOM05D008126 ORTHO05D000309 9.6e-56 220.3 145 73.8
Lj6P93T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-55 219.9 136 79.4
Lj2P1096T11 Lonicera japonica HOM05D008126 ORTHO05D000309 6.2e-55 217.6 145 74.5
Lj4P203T20 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-54 214.5 145 72.4
Lj2P78T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-52 209.9 140 72.9
Lj4E150G0 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-52 209.9 144 72.9
Lj5P369T29 Lonicera japonica HOM05D008126 ORTHO05D000309 1.7e-52 209.5 145 72.4
Lj9P530T13 Lonicera japonica HOM05D008126 ORTHO05D000309 3.8e-52 208.4 145 71.0
Lj3P12T7 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-51 205.3 127 77.2
Lj4P899T22 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-50 203.0 140 72.1
Lj2P438T31 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-49 199.5 118 82.2
Lj5P17T12 Lonicera japonica HOM05D008126 ORTHO05D000309 2.4e-46 189.1 127 71.7
Lj2P1128T27 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-45 186.0 100 86.0
Lj2P1210T23 Lonicera japonica HOM05D008126 ORTHO05D000309 6.5e-44 181.0 144 62.5
Lj2C893T6 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-44 180.6 145 61.4
Lj3P53T19 Lonicera japonica HOM05D008126 ORTHO05D000309 8.4e-44 180.6 145 62.1
Lj4P758T63 Lonicera japonica HOM05D008126 ORTHO05D000309 3.2e-43 178.7 145 61.4
Lj3P238T23 Lonicera japonica HOM05D008126 ORTHO05D000309 5.5e-43 177.9 115 73.9
Lj8P434T2 Lonicera japonica HOM05D008126 ORTHO05D000309 6.0e-42 174.5 144 59.7
Lj2P720T1 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-41 173.3 142 59.9
Lj6P58T20 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-41 173.3 111 74.8
Lj1P415T15 Lonicera japonica HOM05D008126 ORTHO05D000309 5.1e-41 171.4 144 59.7
Lj3P1030T42 Lonicera japonica HOM05D008126 ORTHO05D000309 8.7e-41 170.6 133 66.2
Lj3P715T47 Lonicera japonica HOM05D008126 ORTHO05D000309 3.3e-40 168.7 135 60.0
Lj7P267T11 Lonicera japonica HOM05D008126 ORTHO05D000309 6.3e-39 164.5 142 56.3
Lj1A225T5 Lonicera japonica HOM05D008126 ORTHO05D000309 1.1e-38 163.7 124 62.1
Lj1P1225T25 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-38 161.8 138 57.2
Lj9P461T43 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-38 161.8 136 58.1
Lj9P734T4 Lonicera japonica HOM05D008126 ORTHO05D000309 5.3e-38 161.4 86 87.2
Lj2P759T3 Lonicera japonica HOM05D008126 ORTHO05D000309 2.0e-37 159.5 86 87.2
Lj1P842T49 Lonicera japonica HOM05D008126 ORTHO05D000309 4.5e-37 158.3 105 73.3
Lj6P779T66 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-35 153.3 142 54.9
Lj2P661T3 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-34 150.2 125 56.8
Lj2P1035T33 Lonicera japonica HOM05D008126 ORTHO05D000309 4.6e-34 148.3 101 70.3
Lj3P1024T39 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-34 147.5 138 52.9
Lj3P956T21 Lonicera japonica HOM05D008126 ORTHO05D000309 3.9e-33 145.2 82 89.0
Lj9P465T64 Lonicera japonica HOM05D008126 ORTHO05D000309 8.8e-33 144.1 114 62.3
Lj2P828T8 Lonicera japonica HOM05D008126 ORTHO05D000309 4.1e-30 135.2 106 60.4
Lj4P611T23 Lonicera japonica HOM05D008126 ORTHO05D000309 1.6e-26 123.2 114 52.6
Lj7P342T47 Lonicera japonica HOM05D008126 ORTHO05D000309 7.9e-26 120.9 110 55.5
Lj1P817T17 Lonicera japonica HOM05D008126 ORTHO05D000309 8.2e-23 110.9 89 59.6
Lj4P291T36 Lonicera japonica HOM05D008126 ORTHO05D000309 1.4e-22 110.2 141 44.0
Lj6P361T6 Lonicera japonica HOM05D008126 ORTHO05D000309 7.7e-21 104.4 89 55.1
Lj8P617T6 Lonicera japonica HOM05D008126 ORTHO05D000309 2.2e-20 102.8 85 56.5
Lj2P359T36 Lonicera japonica HOM05D008126 ORTHO05D000309 1.8e-17 93.2 86 54.7
Lj5P258T10 Lonicera japonica HOM05D008126 ORTHO05D000309 4.4e-16 88.6 80 57.5
Lj1P1015T13 Lonicera japonica HOM05D008126 ORTHO05D000309 1.3e-15 87.0 82 54.9
Lj9P201T30 Lonicera japonica HOM05D008126 ORTHO05D000309 1.2e-10 70.5 86 48.8
Lju9295C0G2 Lonicera japonica HOM05D008126 ORTHO05D000309 4.7e-10 68.6 71 50.7
Aqoxy7G02008 Aquilegia oxysepala HOM05D008126 ORTHO05D000309 1.5e-08 63.5 132 28.8
CiPaw.05G103700 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.3e-08 62.4 146 30.1
CiPaw.13G125800 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.4e-08 62.0 98 38.8
CiPaw.01G013100 Carya illinoinensis HOM05D009850 ORTHO05D011981 5.7e-08 61.6 67 44.8
CiPaw.11G105700 Carya illinoinensis HOM05D009850 ORTHO05D011981 9.7e-08 60.8 91 38.5
CiPaw.01G061900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-07 60.5 55 50.9
CiPaw.01G217800 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-07 60.5 74 43.2
CiPaw.16G049900 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.3e-07 60.5 55 50.9
CiPaw.03G153700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-07 60.1 55 47.3
CiPaw.13G085700 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.7e-07 60.1 74 41.9
Dinv14680 Davidia involucrata HOM05D008126 ORTHO05D000309 2.2e-07 59.7 40 57.5
Carub.0001s3344 Capsella rubella HOM05D010286 ORTHO05D000309 2.8e-07 59.3 110 36.4
CiPaw.01G105900 Carya illinoinensis HOM05D009850 ORTHO05D011981 2.8e-07 59.3 55 50.9
CiPaw.01G053000 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.7e-07 58.9 74 40.5
Dinv22727 Davidia involucrata HOM05D008126 ORTHO05D000309 3.7e-07 58.9 61 45.9
BraA02t06986Z Brassica rapa HOM05D007774 ORTHO05D000309 4.8e-07 58.5 120 30.0
CiPaw.14G106100 Carya illinoinensis HOM05D009850 ORTHO05D011981 4.8e-07 58.5 55 45.5
CiPaw.15G130200 Carya illinoinensis HOM05D009850 ORTHO05D011981 8.2e-07 57.8 55 49.1
Hma1.2p1_0283F.1_g113450 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 8.2e-07 57.8 72 43.1
VMungo1215G0338 Vigna mungo HOM05D002602 ORTHO05D002661 8.2e-07 57.8 103 29.1
CiPaw.07G027100 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.1e-06 57.4 55 45.5
CiPaw.09G066300 Carya illinoinensis HOM05D009850 ORTHO05D011981 1.1e-06 57.4 68 39.7
Hma1.2p1_0362F.1_g136570 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.1e-06 57.4 80 40.0
SGA_v2.0_scaffold199G41207 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-06 57.4 63 39.7
SGA_v2.0_scaffold2G00884 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-06 57.4 141 31.2
SGA_v2.0_scaffold38G14998 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-06 57.4 54 44.4
SGA_v2.0_scaffold53G19282 Striga asiatica HOM05D011630 ORTHO05D014269 1.1e-06 57.4 141 31.2
SGA_v2.0_scaffold203G41556 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-06 57.0 144 30.6
SGA_v2.0_scaffold22G09678 Striga asiatica HOM05D011630 ORTHO05D014269 1.4e-06 57.0 60 43.3
Hma1.2p1_1219F.1_g267960 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.8e-06 56.6 80 40.0
Peaxi162Scf00723g00110 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 55 50.9
Peaxi162Scf00756g00016 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 55 50.9
Peaxi162Scf01302g00024 Petunia axillaris HOM05D001383 ORTHO05D000309 1.8e-06 56.6 67 41.8
SGA_v2.0_scaffold217G42455 Striga asiatica HOM05D011630 ORTHO05D014269 1.8e-06 56.6 141 31.2
SGA_v2.0_scaffold263G45986 Striga asiatica HOM05D011630 ORTHO05D014269 1.8e-06 56.6 141 31.2
SGA_v2.0_scaffold354G49733 Striga asiatica HOM05D011630 ORTHO05D014269 1.8e-06 56.6 141 31.2
Nitab4.5_0000141g0260 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.4e-06 56.2 74 33.8
Nitab4.5_0000337g0240 Nicotiana tabacum HOM05D009794 ORTHO05D000309 2.4e-06 56.2 49 49.0
Peaxi162Scf00562g00008 Petunia axillaris HOM05D004040 ORTHO05D000309 2.4e-06 56.2 42 52.4
Peaxi162Scf01167g00009 Petunia axillaris HOM05D004040 ORTHO05D000309 2.4e-06 56.2 42 52.4
SGA_v2.0_scaffold267G46184 Striga asiatica HOM05D035478 ORTHO05D000309 2.4e-06 56.2 43 51.2
BcaB01g02175 Brassica carinata HOM05D007774 ORTHO05D000309 3.1e-06 55.8 104 34.6
CiPaw.05G086500 Carya illinoinensis HOM05D009850 ORTHO05D011981 3.1e-06 55.8 55 43.6
Peaxi162Scf00171g00022 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.8 67 40.3
Peaxi162Scf00225g00101 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.8 67 40.3
Peaxi162Scf00320g00217 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.8 52 48.1
Peaxi162Scf00699g00025 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.8 67 40.3
Peaxi162Scf00990g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 3.1e-06 55.8 67 40.3
Rhsim03G0135300 Rhododendron simsii HOM05D010572 ORTHO05D012753 3.1e-06 55.8 45 48.9
SGA_v2.0_scaffold156G37257 Striga asiatica HOM05D035478 ORTHO05D000309 3.1e-06 55.8 128 29.7
CAN.G1459.18 Capsicum annuum HOM05D009408 ORTHO05D000309 4.1e-06 55.5 46 45.7
Nitab4.5_0000529g0090 Nicotiana tabacum HOM05D009794 ORTHO05D000309 4.1e-06 55.5 49 49.0
Peaxi162Scf00658g00010 Petunia axillaris HOM05D001383 ORTHO05D000309 4.1e-06 55.5 55 47.3
SGA_v2.0_scaffold3G01575 Striga asiatica HOM05D011630 ORTHO05D014269 4.1e-06 55.5 79 39.2
BcaB01g02010 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-06 55.1 122 33.6
BcaB08g35933 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-06 55.1 104 33.7
BcaNung05585 Brassica carinata HOM05D007774 ORTHO05D000309 5.3e-06 55.1 122 33.6
Gohir.A01G209050 Gossypium hirsutum HOM05D001383 ORTHO05D000309 5.3e-06 55.1 47 48.9
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 5.3e-06 55.1 72 47.2
Peaxi162Scf00795g00012 Petunia axillaris HOM05D001383 ORTHO05D000309 5.3e-06 55.1 66 40.9
Nitab4.5_0000128g0210 Nicotiana tabacum HOM05D009794 ORTHO05D000309 7.0e-06 54.7 49 49.0
Peaxi162Scf00351g00017 Petunia axillaris HOM05D001383 ORTHO05D000309 7.0e-06 54.7 66 39.4
VMungo0464G1367 Vigna mungo HOM05D008573 ORTHO05D009911 7.0e-06 54.7 69 39.1
VMungo1383G2600 Vigna mungo HOM05D010006 ORTHO05D009911 7.0e-06 54.7 64 40.6
BcaB07g33250 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-06 54.3 104 33.7
BcaB08g35546 Brassica carinata HOM05D007774 ORTHO05D000309 9.1e-06 54.3 52 46.2
Hma1.2p1_1382F.1_g279350 Hydrangea macrophylla HOM05D008126 ORTHO05D000309 9.1e-06 54.3 50 44.0
Peaxi162Scf00002g02917 Petunia axillaris HOM05D001383 ORTHO05D000309 9.1e-06 54.3 53 49.1
Peaxi162Scf00914g00516 Petunia axillaris HOM05D004040 ORTHO05D000309 9.1e-06 54.3 42 50.0


User provided reference genes

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