Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1194T69 Lonicera japonica HOM05D005954 ORTHO05D007347 1.7e-39 165.6 86 100.0
Thecc.06G173000 Theobroma cacao HOM05D005954 ORTHO05D007347 1.2e-29 132.9 86 81.4
Gohir.D05G158700 Gossypium hirsutum HOM05D005954 ORTHO05D007347 4.5e-29 131.0 84 81.0
Gorai.009G163700 Gossypium raimondii HOM05D005954 ORTHO05D007347 4.5e-29 131.0 84 81.0
TAR626G1287 Trochodendron aralioides HOM05D005954 ORTHO05D007347 3.8e-28 127.9 86 80.2
Gohir.A05G156000 Gossypium hirsutum HOM05D005954 ORTHO05D007347 5.0e-28 127.5 84 79.8
Manes.17G054200 Manihot esculenta HOM05D005954 ORTHO05D007347 8.5e-28 126.7 84 79.8
GSVIVG01021193001 Vitis vinifera HOM05D005954 ORTHO05D007347 1.1e-27 126.3 86 77.9
Prupe.4G059500 Prunus persica HOM05D005954 ORTHO05D007347 4.2e-27 124.4 86 77.9
Gohir.A06G134004 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.2e-27 123.6 84 77.4
Gohir.D06G136500 Gossypium hirsutum HOM05D005954 ORTHO05D007347 7.2e-27 123.6 84 77.4
Ciclev10017015m.g Citrus clementina HOM05D005954 ORTHO05D007347 1.6e-26 122.5 86 79.1
FAN21G0082 Fragaria x ananassa HOM05D005954 ORTHO05D007347 1.6e-26 122.5 86 77.9
DCAR_007962 Daucus carota HOM05D005954 ORTHO05D007347 2.1e-26 122.1 84 79.8
COL.COLO4_31320 Corchorus olitorius HOM05D005954 ORTHO05D007347 2.7e-26 121.7 79 81.0
Duzib160G0806 Durio zibethinus HOM05D005954 ORTHO05D007347 2.7e-26 121.7 81 80.2
Haze_06257 Corylus avellana HOM05D005954 ORTHO05D007347 3.6e-26 121.3 86 76.7
FvH4_3g07980 Fragaria vesca HOM05D005954 ORTHO05D007347 3.6e-26 121.3 86 76.7
FAN16G0914 Fragaria x ananassa HOM05D005954 ORTHO05D007347 3.6e-26 121.3 86 76.7
Gorai.010G158700 Gossypium raimondii HOM05D005954 ORTHO05D007347 3.6e-26 121.3 84 76.2
Potri.011G064800 Populus trichocarpa HOM05D005954 ORTHO05D007347 3.6e-26 121.3 86 77.9
Dinv04624 Davidia involucrata HOM05D005954 ORTHO05D007347 4.7e-26 120.9 84 78.6
FAN11G0799 Fragaria x ananassa HOM05D005954 ORTHO05D007347 6.1e-26 120.6 86 76.7
RcHm_v2.0_Chr5g0010351 Rosa chinensis HOM05D005954 ORTHO05D007347 6.1e-26 120.6 86 77.9
Eucgr.D00519 Eucalyptus grandis HOM05D005954 ORTHO05D007347 8.0e-26 120.2 86 80.2
QL05p046336 Quercus lobata HOM05D005954 ORTHO05D007347 1.0e-25 119.8 83 77.1
Atru.chr10.1690 Acer truncatum HOM05D005954 ORTHO05D007347 1.4e-25 119.4 84 77.4
MD10G1282300 Malus domestica HOM05D005954 ORTHO05D007347 1.4e-25 119.4 86 74.4
CsaV3_6G050830 Cucumis sativus L. HOM05D005954 ORTHO05D007347 1.8e-25 119.0 86 75.6
Glyma.13G230600 Glycine max HOM05D005954 ORTHO05D007347 1.8e-25 119.0 83 77.1
Glyma.15G082000 Glycine max HOM05D005954 ORTHO05D007347 1.8e-25 119.0 83 77.1
Sabra11G0046600 Salix brachista HOM05D005954 ORTHO05D007347 5.2e-25 117.5 85 77.6
Lj6g0020578 Lotus japonicus HOM05D005954 ORTHO05D007347 6.7e-25 117.1 84 78.6
PSO541G3988 Papaver somniferum HOM05D005954 ORTHO05D007347 6.7e-25 117.1 84 76.2
CANSAT11G0094 Cannabis sativa HOM05D005954 ORTHO05D007347 8.8e-25 116.7 86 73.3
MELO3C007218.2 Cucumis melo HOM05D005954 ORTHO05D007347 8.8e-25 116.7 86 74.4
Nn1g09054 Nelumbo nucifera HOM05D005954 ORTHO05D007347 8.8e-25 116.7 86 74.4
Manes.16G037400 Manihot esculenta HOM05D005954 ORTHO05D007347 1.2e-24 116.3 84 76.2
Phvul.006G176900 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 1.2e-24 116.3 83 77.1
Phvul.006G176980 Phaseolus vulgaris HOM05D005954 ORTHO05D007347 1.2e-24 116.3 83 77.1
PSO675G5672 Papaver somniferum HOM05D005954 ORTHO05D007347 1.5e-24 115.9 84 75.0
ClCG01G023670 Citrullus lanatus HOM05D005954 ORTHO05D007347 3.3e-24 114.8 83 74.7
Ah.09g233660 Amaranthus hybridus HOM05D005954 ORTHO05D007347 4.4e-24 114.4 84 75.0
Cpa.g.sc7.59 Carica papaya HOM05D005954 ORTHO05D007347 7.5e-24 113.6 86 75.6
TWI38G2142 Tripterygium wilfordii HOM05D005954 ORTHO05D007347 7.5e-24 113.6 84 76.2
arahy.Tifrunner.gnm1.ann1.N07IEU Arachis hypogaea HOM05D005954 ORTHO05D007347 1.3e-23 112.8 83 74.7
Peaxi162Scf00061g00155 Petunia axillaris HOM05D005954 ORTHO05D007347 1.3e-23 112.8 86 73.3
PGR004G0539 Punica granatum HOM05D005954 ORTHO05D007347 1.3e-23 112.8 86 73.3
PGR004G0737 Punica granatum HOM05D005954 ORTHO05D007347 1.3e-23 112.8 86 73.3
Sed0006910 Sechium edule HOM05D005954 ORTHO05D007347 1.3e-23 112.8 86 72.1
AUR62036591 Chenopodium quinoa HOM05D005954 ORTHO05D007347 2.2e-23 112.1 84 75.0
Oeu001090.1 Olea europaea HOM05D005954 ORTHO05D007347 2.2e-23 112.1 79 73.4
CSS0014251 Camellia sinensis var. sinensis HOM05D005954 ORTHO05D007347 2.8e-23 111.7 86 72.1
MD16G1032000 Malus domestica HOM05D005954 ORTHO05D007347 4.8e-23 110.9 86 70.9
AUR62031174 Chenopodium quinoa HOM05D005954 ORTHO05D007347 6.3e-23 110.5 84 73.8
EL10Ac8g20509 Beta vulgaris HOM05D005954 ORTHO05D007347 1.8e-22 109.0 84 71.4
Aqoxy1G03187 Aquilegia oxysepala HOM05D005954 ORTHO05D007347 2.4e-22 108.6 86 72.1
MSTRG.14726 Avicennia marina HOM05D005954 ORTHO05D007347 3.1e-22 108.2 84 71.4
SalBow8G3893 Salvia bowleyana HOM05D005954 ORTHO05D007347 3.1e-22 108.2 86 70.9
CDE05G1458 Ceratophyllum demersum HOM05D005954 ORTHO05D007347 4.1e-22 107.8 86 73.3
Ca_00467_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 4.1e-22 107.8 84 72.6
Ca_30955_v3 Cicer arietinum L. HOM05D005954 ORTHO05D007347 4.1e-22 107.8 84 72.6
MBI13_g00561_MAGBIO Magnolia biondii HOM05D005954 ORTHO05D007347 5.3e-22 107.5 86 72.1
MD05G1303200 Malus domestica HOM05D005954 ORTHO05D007347 5.3e-22 107.5 74 77.0
Nitab4.5_0000117g0150 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.0e-22 107.1 86 70.9
Nitab4.5_0004274g0040 Nicotiana tabacum HOM05D005954 ORTHO05D007347 7.0e-22 107.1 86 70.9
MD16G1032400 Malus domestica HOM05D005954 ORTHO05D007347 9.1e-22 106.7 85 69.4
Os01g0805000 Oryza sativa ssp. japonica HOM05D005954 ORTHO05D007347 9.1e-22 106.7 84 69.0
C07p16610 Brassica napus HOM05D005954 ORTHO05D007347 1.2e-21 106.3 86 70.9
Zm00001eb150530 Zea mays HOM05D005954 ORTHO05D007347 1.2e-21 106.3 82 68.3
ATR0602G014 Amborella trichopoda HOM05D005954 ORTHO05D007347 1.6e-21 105.9 86 69.8
Migut.H01450 Erythranthe guttata HOM05D005954 ORTHO05D007347 2.0e-21 105.5 85 69.4
Lalb_Chr20g0121221 Lupinus albus HOM05D005954 ORTHO05D007347 2.0e-21 105.5 66 84.8
Cfa000593 Carpinus fangiana HOM05D005954 ORTHO05D007347 2.7e-21 105.1 74 77.0
CiPaw.09G068600 Carya illinoinensis HOM05D005954 ORTHO05D007347 2.7e-21 105.1 74 78.4
ECA236G0551 Erigeron canadensis HOM05D005954 ORTHO05D007347 2.7e-21 105.1 85 71.8
Lsat_1_v5_gn_7_23061 Lactuca sativa HOM05D005954 ORTHO05D007347 2.7e-21 105.1 87 70.1
HPP92_016045 Vanilla planifolia HOM05D005954 ORTHO05D007347 2.7e-21 105.1 85 69.4
Thhalv10008967m.g Eutrema salsugineum HOM05D005954 ORTHO05D007347 3.5e-21 104.8 87 69.0
Solyc01g056780.3 Solanum lycopersicum HOM05D005954 ORTHO05D007347 3.5e-21 104.8 86 68.6
CARHR028290 Cardamine hirsuta HOM05D005954 ORTHO05D007347 4.5e-21 104.4 86 69.8
Cc02_g14660 Coffea canephora HOM05D005954 ORTHO05D007347 4.5e-21 104.4 86 67.4
BcaNung06433 Brassica carinata HOM05D005954 ORTHO05D007347 5.9e-21 104.0 87 67.8
C03p75510 Brassica napus HOM05D005954 ORTHO05D007347 5.9e-21 104.0 88 68.2
Medtr2g015790 Medicago truncatula HOM05D005954 ORTHO05D007347 5.9e-21 104.0 83 68.7
THA.LOC104820590 Tarenaya hassleriana HOM05D005954 ORTHO05D007347 5.9e-21 104.0 87 67.8
TPR.G11659 Trifolium pratense HOM05D005954 ORTHO05D007347 5.9e-21 104.0 83 69.9
BcaNung06755 Brassica carinata HOM05D005954 ORTHO05D007347 7.7e-21 103.6 88 68.2
AT1G29070 Arabidopsis thaliana HOM05D005954 ORTHO05D007347 1.0e-20 103.2 87 66.7
BcaC05g26922 Brassica carinata HOM05D005954 ORTHO05D007347 1.0e-20 103.2 87 69.0
C05p27750 Brassica napus HOM05D005954 ORTHO05D007347 1.0e-20 103.2 87 69.0
BolC5t31496H Brassica oleracea HOM05D005954 ORTHO05D007347 1.0e-20 103.2 87 69.0
Atru.chr10.1684 Acer truncatum HOM05D005954 ORTHO05D007347 1.3e-20 102.8 80 71.2
AL1G42790 Arabidopsis lyrata HOM05D005954 ORTHO05D007347 1.3e-20 102.8 87 66.7
arahy.Tifrunner.gnm1.ann1.YBYE48 Arachis hypogaea HOM05D005954 ORTHO05D007347 1.3e-20 102.8 83 72.3
BcaB07g32486 Brassica carinata HOM05D005954 ORTHO05D007347 1.3e-20 102.8 87 67.8
A08p25330 Brassica napus HOM05D005954 ORTHO05D007347 1.3e-20 102.8 88 67.0
A09p37340 Brassica napus HOM05D005954 ORTHO05D007347 1.3e-20 102.8 87 67.8
BraA08t34485Z Brassica rapa HOM05D005954 ORTHO05D007347 1.3e-20 102.8 88 67.0
BraA09t39243Z Brassica rapa HOM05D005954 ORTHO05D007347 1.3e-20 102.8 87 67.8
Carub.0001s2727 Capsella rubella HOM05D005954 ORTHO05D007347 1.7e-20 102.4 87 66.7
Sp1g25010 Schrenkiella parvula HOM05D005954 ORTHO05D007347 1.7e-20 102.4 87 67.8
PGSC0003DMG400021493 Solanum tuberosum HOM05D005954 ORTHO05D007347 2.2e-20 102.1 86 67.4
Sc05g0007180 Simmondsia chinensis HOM05D005954 ORTHO05D007347 2.9e-20 101.7 73 76.7
BolC3t19807H Brassica oleracea HOM05D005954 ORTHO05D007347 3.8e-20 101.3 88 67.0
Aa31LG5G21180 Aethionema arabicum HOM05D005954 ORTHO05D007347 6.5e-20 100.5 87 66.7
arahy.Tifrunner.gnm1.ann1.69550A Arachis hypogaea HOM05D005954 ORTHO05D007347 1.1e-19 99.8 71 78.9
Psat1g199440 Pisum sativum HOM05D005954 ORTHO05D007347 1.9e-19 99.0 84 69.0
Hund23979 Selenicereus undatus HOM05D005954 ORTHO05D007347 1.9e-19 99.0 83 67.5
CDE02G3841 Ceratophyllum demersum HOM05D005954 ORTHO05D009675 4.2e-19 97.8 86 69.8
SGA_v2.0_scaffold1G00032 Striga asiatica HOM05D005954 ORTHO05D007347 4.2e-19 97.8 86 66.3
HanXRQChr04g0116001 Helianthus annuus HOM05D005954 ORTHO05D007347 5.5e-19 97.4 87 65.5
Sopen01g025250 Solanum pennellii HOM05D005954 ORTHO05D007347 1.2e-18 96.3 74 73.0
CAN.G889.12 Capsicum annuum HOM05D005954 ORTHO05D007347 4.7e-18 94.4 74 71.6
MD10G1067400 Malus domestica HOM05D005954 ORTHO05D007347 8.0e-18 93.6 83 62.7
unitig_22.g6753 Utricularia gibba HOM05D005954 ORTHO05D007347 8.0e-18 93.6 89 64.0
Rhsim13G0191500 Rhododendron simsii HOM05D005954 ORTHO05D007347 2.6e-16 88.6 84 64.3
vmacro01548 Vaccinium macrocarpon HOM05D005954 ORTHO05D007347 1.3e-15 86.3 85 63.5
MD16G1032600 Malus domestica HOM05D005954 ORTHO05D007347 7.7e-13 77.0 54 75.9
SEGI_22528 Sequoiadendron giganteum HOM05D005954 ORTHO05D007347 1.5e-11 72.8 65 69.2
BcaC06g35397 Brassica carinata HOM05D005954 ORTHO05D007347 1.9e-11 72.4 86 54.7
CARHR028330 Cardamine hirsuta HOM05D005954 ORTHO05D007347 3.3e-11 71.6 59 69.5
Pp3c18_19220 Physcomitrium patens HOM05D005954 ORTHO05D007347 2.1e-10 68.9 62 66.1
CBR_g29683 Chara braunii HOM05D005954 ORTHO05D007347 4.7e-10 67.8 62 59.7
Mapoly0043s0046 Marchantia polymorpha HOM05D005954 ORTHO05D007347 5.2e-09 64.3 66 59.1
Pp3c21_6450 Physcomitrium patens HOM05D005954 ORTHO05D007347 5.2e-09 64.3 62 61.3
AagrBONN_evm.TU.Sc2ySwM_117.1983 Anthoceros agrestis HOM05D005954 ORTHO05D007347 2.0e-08 62.4 65 56.9


User provided reference genes

Program Settings