Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1161T30 Lonicera japonica HOM05D005932 ORTHO05D006213 2.3e-61 239.2 167 100.0
Dinv10792 Davidia involucrata HOM05D005932 ORTHO05D006213 3.8e-24 115.5 123 61.0
Dinv04757 Davidia involucrata HOM05D005932 ORTHO05D006213 1.4e-21 107.1 112 58.9
Lj2P330T27 Lonicera japonica HOM05D005932 ORTHO05D006213 1.1e-20 104.0 103 56.3
CSS0012768 Camellia sinensis var. sinensis HOM05D005932 ORTHO05D006213 1.1e-18 97.4 118 55.1
Hma1.2p1_0067F.1_g037010 Hydrangea macrophylla HOM05D005932 ORTHO05D006213 1.1e-18 97.4 113 50.4
MD05G1272900 Malus domestica HOM05D005932 ORTHO05D006213 1.0e-16 90.9 124 44.4
Manes.14G123400 Manihot esculenta HOM05D005932 ORTHO05D006213 2.5e-15 86.3 114 46.5
DCAR_003852 Daucus carota HOM05D005932 ORTHO05D006213 2.1e-14 83.2 110 48.2
Nitab4.5_0004615g0090 Nicotiana tabacum HOM05D005932 ORTHO05D006213 3.6e-14 82.4 96 45.8
MD10G1253000 Malus domestica HOM05D005932 ORTHO05D006213 1.0e-13 80.9 124 41.1
TAR626G0301 Trochodendron aralioides HOM05D005932 ORTHO05D006213 1.4e-13 80.5 112 42.9
Actinidia32363 Actinidia chinensis HOM05D005932 ORTHO05D006213 5.2e-13 78.6 107 42.1
CANSAT35G0096 Cannabis sativa HOM05D005932 ORTHO05D006213 6.7e-13 78.2 124 42.7
Atru.chr10.845 Acer truncatum HOM05D005932 ORTHO05D006213 1.2e-12 77.4 109 43.1
Actinidia31387 Actinidia chinensis HOM05D005932 ORTHO05D006213 1.2e-12 77.4 123 42.3
Prupe.4G090500 Prunus persica HOM05D005932 ORTHO05D006213 3.3e-12 75.9 111 40.5
SGA_v2.0_scaffold223G42865 Striga asiatica HOM05D005932 ORTHO05D006213 3.3e-12 75.9 108 45.4
Migut.M01897 Erythranthe guttata HOM05D005932 ORTHO05D006213 5.7e-12 75.1 116 42.2
MSTRG.13271 Avicennia marina HOM05D005932 ORTHO05D006213 7.5e-12 74.7 111 44.1
Rhsim02G0161400 Rhododendron simsii HOM05D005932 ORTHO05D006213 1.7e-11 73.6 104 43.3
COL.COLO4_26835 Corchorus olitorius HOM05D005932 ORTHO05D006213 2.8e-11 72.8 113 42.5
Thecc.06G002100 Theobroma cacao HOM05D005932 ORTHO05D006213 3.7e-11 72.4 109 43.1
SalBow8G0055 Salvia bowleyana HOM05D005932 ORTHO05D006213 4.8e-11 72.0 109 45.9
Solyc02g024010.1 Solanum lycopersicum HOM05D005932 ORTHO05D006213 4.8e-11 72.0 107 47.7
Sopen02g006750 Solanum pennellii HOM05D005932 ORTHO05D006213 4.8e-11 72.0 107 48.6
MSTRG.16291 Avicennia marina HOM05D005932 ORTHO05D006213 6.3e-11 71.6 110 43.6
Duzib235G1239 Durio zibethinus HOM05D005932 ORTHO05D006213 6.3e-11 71.6 108 42.6
PGSC0003DMG400011812 Solanum tuberosum HOM05D005932 ORTHO05D006213 6.3e-11 71.6 107 47.7
Gohir.D10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 8.2e-11 71.2 117 39.3
Lsat_1_v5_gn_2_93200 Lactuca sativa HOM05D005932 ORTHO05D006213 8.2e-11 71.2 104 46.2
Nitab4.5_0005178g0030 Nicotiana tabacum HOM05D005932 ORTHO05D006213 8.2e-11 71.2 123 43.1
Gohir.A10G004200 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.1e-10 70.9 117 38.5
Gorai.011G004600 Gossypium raimondii HOM05D005932 ORTHO05D006213 1.1e-10 70.9 117 39.3
SGA_v2.0_scaffold1G00270 Striga asiatica HOM05D005932 ORTHO05D006213 1.4e-10 70.5 106 43.4
Gohir.D02G103800 Gossypium hirsutum HOM05D005932 ORTHO05D006213 1.8e-10 70.1 114 37.7
Gohir.A03G081000 Gossypium hirsutum HOM05D005932 ORTHO05D006213 2.4e-10 69.7 114 39.5
Peaxi162Scf00395g00004 Petunia axillaris HOM05D005932 ORTHO05D006213 2.4e-10 69.7 112 41.1
TWI38G2281 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.4e-10 69.7 103 43.7
Manes.06G068200 Manihot esculenta HOM05D005932 ORTHO05D006213 3.1e-10 69.3 111 40.5
FvH4_3g10110 Fragaria vesca HOM05D005932 ORTHO05D006213 4.1e-10 68.9 115 40.9
Nitab4.5_0004734g0050 Nicotiana tabacum HOM05D005932 ORTHO05D006213 5.3e-10 68.6 97 47.4
FAN21G2441 Fragaria x ananassa HOM05D005932 ORTHO05D006213 7.0e-10 68.2 110 41.8
Gorai.005G117900 Gossypium raimondii HOM05D005932 ORTHO05D006213 9.1e-10 67.8 114 36.8
CiPaw.10G109100 Carya illinoinensis HOM05D005932 ORTHO05D006213 1.2e-09 67.4 108 42.6
Migut.H01328 Erythranthe guttata HOM05D005932 ORTHO05D006213 1.2e-09 67.4 116 41.4
FAN11G2171 Fragaria x ananassa HOM05D005932 ORTHO05D006213 1.6e-09 67.0 114 40.4
ClCG01G025150 Citrullus lanatus HOM05D005932 ORTHO05D006213 2.7e-09 66.2 112 37.5
Sopen02g019050 Solanum pennellii HOM05D005932 ORTHO05D006213 2.7e-09 66.2 112 41.1
CiPaw.09G141700 Carya illinoinensis HOM05D005932 ORTHO05D006213 4.5e-09 65.5 111 43.2
Duzib192G0542 Durio zibethinus HOM05D005932 ORTHO05D006213 5.9e-09 65.1 119 37.8
MBI18_g11291_MAGBIO Magnolia biondii HOM05D005932 ORTHO05D006213 5.9e-09 65.1 110 46.4
PGSC0003DMG400021122 Solanum tuberosum HOM05D005932 ORTHO05D006213 5.9e-09 65.1 114 39.5
VMungo0540G1966 Vigna mungo HOM05D005932 ORTHO05D006213 5.9e-09 65.1 117 40.2
Eucgr.D00155 Eucalyptus grandis HOM05D005932 ORTHO05D006213 7.7e-09 64.7 126 37.3
Sed0022461 Sechium edule HOM05D005932 ORTHO05D006213 7.7e-09 64.7 108 41.7
CsaV3_6G052360 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.0e-08 64.3 115 37.4
Sed0024512 Sechium edule HOM05D005932 ORTHO05D006213 1.0e-08 64.3 117 41.0
Glyma.05G166000 Glycine max HOM05D005932 ORTHO05D006213 1.3e-08 63.9 113 36.3
Potri.011G095000 Populus trichocarpa HOM05D005932 ORTHO05D006213 1.3e-08 63.9 113 42.5
Sed0018131 Sechium edule HOM05D005932 ORTHO05D006213 1.7e-08 63.5 111 35.1
MELO3C007074.2 Cucumis melo HOM05D005932 ORTHO05D006213 2.9e-08 62.8 93 40.9
unitig_92.g28172 Utricularia gibba HOM05D005932 ORTHO05D006213 2.9e-08 62.8 113 37.2
ClCG03G006250 Citrullus lanatus HOM05D005932 ORTHO05D006213 3.8e-08 62.4 112 40.2
Psat1g167520 Pisum sativum HOM05D005932 ORTHO05D006213 6.5e-08 61.6 108 38.0
Manes.05G115000 Manihot esculenta HOM05D005932 ORTHO05D006213 8.5e-08 61.2 103 39.8
Potri.001G371800 Populus trichocarpa HOM05D005932 ORTHO05D006213 8.5e-08 61.2 110 42.7
CsaV3_1G037320 Cucumis sativus L. HOM05D005932 ORTHO05D006213 1.1e-07 60.8 106 38.7
Nn3g20198 Nelumbo nucifera HOM05D005932 ORTHO05D006213 1.5e-07 60.5 112 40.2
Ca_17852_v3 Cicer arietinum L. HOM05D005932 ORTHO05D006213 1.9e-07 60.1 111 33.3
Eucgr.D00169 Eucalyptus grandis HOM05D005932 ORTHO05D006213 1.9e-07 60.1 117 35.9
TPR.G6729 Trifolium pratense HOM05D005932 ORTHO05D006213 2.5e-07 59.7 114 35.1
Phvul.002G246500 Phaseolus vulgaris HOM05D005932 ORTHO05D006213 4.2e-07 58.9 113 36.3
VMungo0251G2717 Vigna mungo HOM05D005932 ORTHO05D006213 4.2e-07 58.9 113 37.2
Psat7g064920 Pisum sativum HOM05D005932 ORTHO05D006213 7.2e-07 58.2 112 33.9
Sabra11G0088800 Salix brachista HOM05D005932 ORTHO05D006213 9.4e-07 57.8 113 38.9
Glyma.08G124100 Glycine max HOM05D005932 ORTHO05D006213 2.1e-06 56.6 113 33.6
Lj4g0014090 Lotus japonicus HOM05D005932 ORTHO05D006213 2.1e-06 56.6 114 36.8
TWI15G0856 Tripterygium wilfordii HOM05D005932 ORTHO05D006213 2.1e-06 56.6 104 38.5
unitig_37.g12073 Utricularia gibba HOM05D005932 ORTHO05D006213 4.7e-06 55.5 104 38.5
BcaB07g32687 Brassica carinata HOM05D012212 ORTHO05D006213 6.1e-06 55.1 103 34.0
C05p29520 Brassica napus HOM05D012212 ORTHO05D006213 6.1e-06 55.1 103 34.0
BolC5t31682H Brassica oleracea HOM05D012212 ORTHO05D006213 6.1e-06 55.1 103 34.0


User provided reference genes

Program Settings