Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1160T24 Lonicera japonica HOM05D006323 ORTHO05D007827 4.6e-48 194.1 92 100.0
Lj4A71T64 Lonicera japonica HOM05D006323 ORTHO05D007827 1.3e-37 159.5 84 91.7
Lj5P501T7 Lonicera japonica HOM05D006323 ORTHO05D007827 1.4e-36 156.0 81 93.8
Dinv44950 Davidia involucrata HOM05D006323 ORTHO05D007827 1.8e-31 139.0 84 79.8
Hma1.2p1_0819F.1_g223630 Hydrangea macrophylla HOM05D006323 ORTHO05D007827 8.2e-29 130.2 84 77.4
Actinidia38108 Actinidia chinensis HOM05D006323 ORTHO05D007827 2.4e-28 128.6 84 75.0
GSVIVG01009337001 Vitis vinifera HOM05D006323 ORTHO05D007827 7.0e-28 127.1 84 72.6
CSS0050369 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 1.7e-26 122.5 84 73.8
CSS0010458 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 3.8e-26 121.3 84 72.6
ClCG08G016540 Citrullus lanatus HOM05D006323 ORTHO05D007827 5.0e-26 120.9 81 75.3
CSS0045238 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 6.5e-26 120.6 84 70.2
Nitab4.5_0003725g0070 Nicotiana tabacum HOM05D006323 ORTHO05D007827 6.5e-26 120.6 89 67.4
Sed0007452 Sechium edule HOM05D006323 ORTHO05D007827 2.5e-25 118.6 80 71.2
TAR381G0342 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.5e-25 118.6 82 70.7
TAR381G1608 Trochodendron aralioides HOM05D006323 ORTHO05D007827 2.5e-25 118.6 82 70.7
MELO3C010800.2 Cucumis melo HOM05D006323 ORTHO05D007827 3.2e-25 118.2 76 76.3
CsaV3_2G026070 Cucumis sativus L. HOM05D006323 ORTHO05D007827 4.2e-25 117.9 76 75.0
CSS0024022 Camellia sinensis var. sinensis HOM05D006323 ORTHO05D007827 7.2e-25 117.1 84 69.0
vmacro22049 Vaccinium macrocarpon HOM05D006323 ORTHO05D007827 1.6e-24 115.9 85 72.9
Nn5g30609 Nelumbo nucifera HOM05D006323 ORTHO05D007827 2.7e-24 115.2 84 66.7
Prupe.1G422100 Prunus persica HOM05D006323 ORTHO05D007827 3.6e-24 114.8 84 69.0
Rhsim07G0219300 Rhododendron simsii HOM05D006323 ORTHO05D007827 1.4e-23 112.8 85 70.6
Cfa013771 Carpinus fangiana HOM05D006323 ORTHO05D007827 3.0e-23 111.7 77 72.7
Haze_22429 Corylus avellana HOM05D006323 ORTHO05D007827 3.0e-23 111.7 77 72.7
PGR083G0013 Punica granatum HOM05D006323 ORTHO05D007827 5.2e-23 110.9 71 74.6
Eucgr.F00088 Eucalyptus grandis HOM05D006323 ORTHO05D007827 1.5e-22 109.4 77 64.9
CiPaw.07G174200 Carya illinoinensis HOM05D006323 ORTHO05D007827 2.0e-22 109.0 78 69.2
Aqoxy6G02596 Aquilegia oxysepala HOM05D006323 ORTHO05D007827 2.6e-22 108.6 75 72.0
Nitab4.5_0000497g0170 Nicotiana tabacum HOM05D006323 ORTHO05D007827 2.6e-22 108.6 89 61.8
CANSAT25G0442 Cannabis sativa HOM05D006323 ORTHO05D007827 5.7e-22 107.5 78 73.1
Duzib093G0619 Durio zibethinus HOM05D006323 ORTHO05D007827 7.5e-22 107.1 79 64.6
arahy.Tifrunner.gnm1.ann1.694GR7 Arachis hypogaea HOM05D006323 ORTHO05D007827 9.8e-22 106.7 84 64.3
arahy.Tifrunner.gnm1.ann1.JK4I75 Arachis hypogaea HOM05D006323 ORTHO05D007827 9.8e-22 106.7 84 64.3
Cc10_g05020 Coffea canephora HOM05D006323 ORTHO05D007827 1.3e-21 106.3 84 65.5
Gohir.A05G210400 Gossypium hirsutum HOM05D006323 ORTHO05D007827 1.7e-21 105.9 86 62.8
Thecc.08G088000 Theobroma cacao HOM05D006323 ORTHO05D007827 1.7e-21 105.9 86 61.6
PSO541G5960 Papaver somniferum HOM05D006323 ORTHO05D007827 2.2e-21 105.5 76 67.1
PSO675G0675 Papaver somniferum HOM05D006323 ORTHO05D007827 2.2e-21 105.5 76 67.1
Hund05295 Selenicereus undatus HOM05D006323 ORTHO05D007827 2.2e-21 105.5 83 62.7
Gohir.D05G213700 Gossypium hirsutum HOM05D006323 ORTHO05D007827 4.8e-21 104.4 87 60.9
Gorai.009G220400 Gossypium raimondii HOM05D006323 ORTHO05D007827 6.3e-21 104.0 86 61.6
Ca_13213_v3 Cicer arietinum L. HOM05D006323 ORTHO05D007827 2.4e-20 102.1 83 66.3
AUR62022472 Chenopodium quinoa HOM05D006323 ORTHO05D007827 3.1e-20 101.7 79 69.6
EL10Ac1g02373 Beta vulgaris HOM05D006323 ORTHO05D007827 4.1e-20 101.3 67 74.6
RcHm_v2.0_Chr6g0309741 Rosa chinensis HOM05D006323 ORTHO05D007827 1.6e-19 99.4 85 65.9
Cpa.g.sc142.31 Carica papaya HOM05D006323 ORTHO05D007827 3.5e-19 98.2 84 61.9
QL05p065459 Quercus lobata HOM05D006323 ORTHO05D007827 3.5e-19 98.2 84 64.3
QL12p038177 Quercus lobata HOM05D006323 ORTHO05D007827 3.5e-19 98.2 84 64.3
Migut.N02786 Erythranthe guttata HOM05D006323 ORTHO05D007827 4.5e-19 97.8 85 61.2
FvH4_2g32960 Fragaria vesca HOM05D006323 ORTHO05D007827 7.7e-19 97.1 80 65.0
FAN20G1244 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.7e-19 97.1 80 65.0
FAN24G0652 Fragaria x ananassa HOM05D006323 ORTHO05D007827 7.7e-19 97.1 80 65.0
Glyma.14G089027 Glycine max HOM05D006323 ORTHO05D007827 1.0e-18 96.7 78 66.7
Glyma.17G234600 Glycine max HOM05D006323 ORTHO05D007827 1.0e-18 96.7 75 68.0
Phvul.001G028300 Phaseolus vulgaris HOM05D006323 ORTHO05D007827 1.0e-18 96.7 83 62.7
Sopen04g031380 Solanum pennellii HOM05D006323 ORTHO05D007827 1.0e-18 96.7 89 57.3
TPR.G13155 Trifolium pratense HOM05D006323 ORTHO05D007827 1.0e-18 96.7 82 61.0
Potri.002G117900 Populus trichocarpa HOM05D006323 ORTHO05D007827 1.3e-18 96.3 84 57.1
Manes.18G047100 Manihot esculenta HOM05D006323 ORTHO05D007827 1.7e-18 95.9 84 60.7
PGSC0003DMG400010620 Solanum tuberosum HOM05D006323 ORTHO05D007827 2.2e-18 95.5 89 56.2
Cpa.g.sc142.34 Carica papaya HOM05D006323 ORTHO05D007827 3.8e-18 94.7 84 61.9
FAN27G3326 Fragaria x ananassa HOM05D006323 ORTHO05D007827 3.8e-18 94.7 80 63.8
Lalb_Chr14g0368151 Lupinus albus HOM05D006323 ORTHO05D007827 3.8e-18 94.7 82 62.2
Sabra02G0092600 Salix brachista HOM05D006323 ORTHO05D007827 3.8e-18 94.7 84 57.1
Lj5g0017088 Lotus japonicus HOM05D006323 ORTHO05D007827 5.0e-18 94.4 83 61.4
Oeu016579.1 Olea europaea HOM05D006323 ORTHO05D007827 6.5e-18 94.0 83 61.4
FAN15G2783 Fragaria x ananassa HOM05D006323 ORTHO05D007827 8.5e-18 93.6 80 62.5
SGA_v2.0_scaffold28G11834 Striga asiatica HOM05D006323 ORTHO05D007827 1.1e-17 93.2 87 60.9
VMungo0647G1220 Vigna mungo HOM05D006323 ORTHO05D007827 2.5e-17 92.0 64 71.9
HanXRQChr10g0298611 Helianthus annuus HOM05D006323 ORTHO05D007827 3.2e-17 91.7 64 68.8
Ciclev10001174m.g Citrus clementina HOM05D006323 ORTHO05D007827 4.2e-17 91.3 69 62.3
CAN.G724.32 Capsicum annuum HOM05D006323 ORTHO05D007827 5.5e-17 90.9 89 55.1
Medtr1g017940 Medicago truncatula HOM05D006323 ORTHO05D007827 7.2e-17 90.5 83 62.7
Psat6g018000 Pisum sativum HOM05D006323 ORTHO05D007827 1.2e-16 89.7 64 70.3
Atru.chr13.839 Acer truncatum HOM05D006323 ORTHO05D007827 1.6e-16 89.4 53 77.4
ATR0739G201 Amborella trichopoda HOM05D006323 ORTHO05D007827 1.6e-16 89.4 67 70.1
Lsat_1_v5_gn_1_1301 Lactuca sativa HOM05D006323 ORTHO05D007827 6.1e-16 87.4 69 62.3
SEGI_30290 Sequoiadendron giganteum HOM05D006323 ORTHO05D007827 8.0e-16 87.0 80 55.0
unitig_8.g4874 Utricularia gibba HOM05D006323 ORTHO05D007827 3.0e-15 85.1 54 77.8
Aa31LG5G21510 Aethionema arabicum HOM05D006323 ORTHO05D007827 2.6e-14 82.0 74 54.1
Sc26g0004210 Simmondsia chinensis HOM05D006323 ORTHO05D007827 4.4e-14 81.3 67 61.2
CDE04G3275 Ceratophyllum demersum HOM05D006323 ORTHO05D007827 5.7e-14 80.9 77 59.7
Carub.0003s1171 Capsella rubella HOM05D006323 ORTHO05D007827 1.3e-13 79.7 64 64.1
HPP92_013383 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.3e-13 79.7 81 49.4
HPP92_013407 Vanilla planifolia HOM05D006323 ORTHO05D007827 1.3e-13 79.7 81 49.4
THA.LOC104825780 Tarenaya hassleriana HOM05D006323 ORTHO05D007827 2.2e-13 79.0 63 65.1
Thhalv10028685m.g Eutrema salsugineum HOM05D006323 ORTHO05D007827 2.8e-13 78.6 59 64.4
AT3G12350 Arabidopsis thaliana HOM05D006323 ORTHO05D007827 3.7e-13 78.2 60 65.0
TWI56G0563 Tripterygium wilfordii HOM05D006323 ORTHO05D007827 3.7e-13 78.2 90 53.3
Ah.05g167080 Amaranthus hybridus HOM05D006323 ORTHO05D007827 8.3e-13 77.0 85 52.9
AL3G24000 Arabidopsis lyrata HOM05D006323 ORTHO05D007827 8.3e-13 77.0 60 63.3
CARHR287100 Cardamine hirsuta HOM05D006323 ORTHO05D007827 8.3e-13 77.0 63 57.1
ECA247G3150 Erigeron canadensis HOM05D006323 ORTHO05D007827 8.3e-13 77.0 78 57.7
SalBow2G0555 Salvia bowleyana HOM05D006323 ORTHO05D007827 1.8e-12 75.9 87 52.9
Sp6g10510 Schrenkiella parvula HOM05D006323 ORTHO05D007827 3.1e-12 75.1 63 61.9
TAR628G0857 Trochodendron aralioides HOM05D006323 ORTHO05D007827 4.5e-11 71.2 72 55.6
C03p33680 Brassica napus HOM05D006323 ORTHO05D007827 8.6e-10 67.0 63 55.6
BolC3t15688H Brassica oleracea HOM05D006323 ORTHO05D007827 8.6e-10 67.0 63 55.6
BcaB01g02882 Brassica carinata HOM05D006323 ORTHO05D007827 1.1e-09 66.6 63 55.6
A03p27900 Brassica napus HOM05D006323 ORTHO05D007827 1.5e-09 66.2 63 57.1
BcaC01g04786 Brassica carinata HOM05D006323 ORTHO05D007827 7.3e-09 63.9 63 55.6
BcaC01g04794 Brassica carinata HOM05D006323 ORTHO05D007827 7.3e-09 63.9 63 55.6
Pp3c15_12240 Physcomitrium patens HOM05D006323 ORTHO05D007827 1.2e-08 63.2 58 55.2
BraA03t12002Z Brassica rapa HOM05D006323 ORTHO05D007827 2.1e-08 62.4 63 54.0
Mapoly0007s0129 Marchantia polymorpha HOM05D006323 ORTHO05D007827 8.9e-07 57.0 56 55.4


User provided reference genes

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