Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1156T18 Lonicera japonica HOM05D000520 ORTHO05D000399 2.6e-37 158.7 109 100.0
Lj6C675T3 Lonicera japonica HOM05D000520 ORTHO05D000399 2.3e-14 82.4 89 77.5
Cc03_g02010 Coffea canephora HOM05D000520 ORTHO05D000399 8.6e-09 63.9 54 57.4
QL06p008798 Quercus lobata HOM05D000520 ORTHO05D000399 1.1e-08 63.5 41 73.2
Rhsim04G0221200 Rhododendron simsii HOM05D000520 ORTHO05D000399 1.5e-08 63.2 50 64.0
DCAR_024565 Daucus carota HOM05D000520 ORTHO05D000399 2.5e-08 62.4 61 52.5
Haze_01213 Corylus avellana HOM05D000520 ORTHO05D000399 7.3e-08 60.8 42 64.3
Hma1.2p1_2670F.1_g326640 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 1.2e-07 60.1 62 51.6
CiPaw.01G149000 Carya illinoinensis HOM05D000520 ORTHO05D000399 1.6e-07 59.7 41 65.9
Dinv29767 Davidia involucrata HOM05D000520 ORTHO05D000399 3.6e-07 58.5 62 51.6
arahy.Tifrunner.gnm1.ann1.MC15QU Arachis hypogaea HOM05D000520 ORTHO05D000399 4.7e-07 58.2 40 65.0
arahy.Tifrunner.gnm1.ann1.Z22JU0 Arachis hypogaea HOM05D000520 ORTHO05D000399 4.7e-07 58.2 40 65.0
Manes.05G064600 Manihot esculenta HOM05D000520 ORTHO05D000399 4.7e-07 58.2 62 53.2
Sed0022713 Sechium edule HOM05D000520 ORTHO05D000399 4.7e-07 58.2 61 45.9
vmacro14992 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 4.7e-07 58.2 54 57.4
Rhsim01G0283400 Rhododendron simsii HOM05D000520 ORTHO05D000399 8.0e-07 57.4 54 55.6
SalBow2G0691 Salvia bowleyana HOM05D000520 ORTHO05D000399 8.0e-07 57.4 61 52.5
Aqoxy5G00713 Aquilegia oxysepala HOM05D000520 ORTHO05D000399 1.1e-06 57.0 61 49.2
vmacro08145 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 1.1e-06 57.0 55 52.7
Potri.014G132000 Populus trichocarpa HOM05D000520 ORTHO05D000399 1.4e-06 56.6 62 48.4
GSVIVG01017753001 Vitis vinifera HOM05D000520 ORTHO05D000399 1.4e-06 56.6 39 64.1
Dinv33031 Davidia involucrata HOM05D000520 ORTHO05D000399 1.8e-06 56.2 62 51.6
Nn3g21431 Nelumbo nucifera HOM05D000520 ORTHO05D000399 1.8e-06 56.2 62 48.4
Oeu037750.1 Olea europaea HOM05D000520 ORTHO05D000399 1.8e-06 56.2 39 61.5
CSS0032030 Camellia sinensis var. sinensis HOM05D000520 ORTHO05D000399 2.3e-06 55.8 41 61.0
RcHm_v2.0_Chr6g0293381 Rosa chinensis HOM05D000520 ORTHO05D000399 2.3e-06 55.8 61 49.2
GSVIVG01027966001 Vitis vinifera HOM05D000520 ORTHO05D000399 2.3e-06 55.8 59 50.8
Cpa.g.sc48.88 Carica papaya HOM05D000520 ORTHO05D000399 3.1e-06 55.5 49 59.2
Hma1.2p1_1292F.1_g273650 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 3.1e-06 55.5 62 48.4
Hma1.2p1_1374F.1_g278785 Hydrangea macrophylla HOM05D000520 ORTHO05D000399 3.1e-06 55.5 62 48.4
Lj6g0005585 Lotus japonicus HOM05D000520 ORTHO05D000399 3.1e-06 55.5 42 59.5
SGA_v2.0_scaffold67G22639 Striga asiatica HOM05D000520 ORTHO05D000399 3.1e-06 55.5 40 62.5
TPR.G13851 Trifolium pratense HOM05D000520 ORTHO05D000399 3.1e-06 55.5 62 48.4
TAR636G3055 Trochodendron aralioides HOM05D000520 ORTHO05D000399 3.1e-06 55.5 61 49.2
Actinidia24329 Actinidia chinensis HOM05D000520 ORTHO05D000399 4.0e-06 55.1 62 51.6
MSTRG.10091 Avicennia marina HOM05D000520 ORTHO05D000399 4.0e-06 55.1 40 62.5
CiPaw.07G020900 Carya illinoinensis HOM05D000520 ORTHO05D000399 4.0e-06 55.1 41 61.0
MELO3C006660.2 Cucumis melo HOM05D000520 ORTHO05D000399 4.0e-06 55.1 62 46.8
CsaV3_3G014590 Cucumis sativus L. HOM05D000520 ORTHO05D000399 4.0e-06 55.1 62 46.8
Manes.03G194600 Manihot esculenta HOM05D000520 ORTHO05D000399 4.0e-06 55.1 50 54.0
Nn4g25875 Nelumbo nucifera HOM05D000520 ORTHO05D000399 4.0e-06 55.1 62 48.4
Sabra14G0098100 Salix brachista HOM05D000520 ORTHO05D000399 4.0e-06 55.1 62 50.0
GSVIVG01031153001 Vitis vinifera HOM05D000520 ORTHO05D000399 4.0e-06 55.1 61 50.8
Dinv30800 Davidia involucrata HOM05D000520 ORTHO05D000399 5.2e-06 54.7 50 56.0
Prupe.8G257200 Prunus persica HOM05D000520 ORTHO05D000399 5.2e-06 54.7 61 47.5
vmacro22973 Vaccinium macrocarpon HOM05D000520 ORTHO05D000399 5.2e-06 54.7 62 48.4
MBI18_g04688_MAGBIO Magnolia biondii HOM05D000520 ORTHO05D000399 6.8e-06 54.3 62 50.0
TPR.G9635 Trifolium pratense HOM05D000520 ORTHO05D000399 6.8e-06 54.3 53 54.7
TWI12G0219 Tripterygium wilfordii HOM05D000520 ORTHO05D000399 6.8e-06 54.3 41 61.0
CANSAT25G1223 Cannabis sativa HOM05D000520 ORTHO05D000399 8.9e-06 53.9 62 48.4
Manes.01G216400 Manihot esculenta HOM05D000520 ORTHO05D000399 8.9e-06 53.9 55 52.7
Phvul.009G247600 Phaseolus vulgaris HOM05D000520 ORTHO05D000399 8.9e-06 53.9 33 75.8
QL12p026987 Quercus lobata HOM05D000520 ORTHO05D000399 8.9e-06 53.9 62 46.8


User provided reference genes

Program Settings