Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1065T44 Lonicera japonica HOM05D001298 ORTHO05D001110 9.4e-65 250.0 121 100.0
Lj3A1004T96 Lonicera japonica HOM05D001298 ORTHO05D001110 1.4e-20 103.2 83 66.3
Lj1P517T2 Lonicera japonica HOM05D001298 ORTHO05D001110 1.1e-15 87.0 101 52.5
Aqoxy1G00954 Aquilegia oxysepala HOM05D001298 ORTHO05D001110 2.0e-14 82.8 83 55.4
ClCG10G019430 Citrullus lanatus HOM05D001298 ORTHO05D001110 2.6e-14 82.4 87 52.9
Medtr7g103610 Medicago truncatula HOM05D001298 ORTHO05D001110 5.8e-14 81.3 95 51.6
Psat3g036000 Pisum sativum HOM05D001298 ORTHO05D001110 9.8e-14 80.5 95 50.5
MELO3C009429.2 Cucumis melo HOM05D001298 ORTHO05D001110 1.3e-13 80.1 83 55.4
Ca_08962_v3 Cicer arietinum L. HOM05D001298 ORTHO05D001110 6.4e-13 77.8 95 49.5
CsaV3_3G036750 Cucumis sativus L. HOM05D001298 ORTHO05D001110 8.3e-13 77.4 75 60.0
GSVIVG01033769001 Vitis vinifera HOM05D001298 ORTHO05D001110 8.3e-13 77.4 82 54.9
QL07p040702 Quercus lobata HOM05D001298 ORTHO05D001110 1.4e-12 76.6 72 56.9
Sed0017082 Sechium edule HOM05D001298 ORTHO05D001110 2.4e-12 75.9 96 50.0
DCAR_020783 Daucus carota HOM05D001298 ORTHO05D001110 3.2e-12 75.5 85 52.9
Lalb_Chr20g0112251 Lupinus albus HOM05D001298 ORTHO05D001110 3.2e-12 75.5 85 50.6
Lj1g0019128 Lotus japonicus HOM05D001298 ORTHO05D001110 9.2e-12 73.9 80 52.5
Lalb_Chr01g0018361 Lupinus albus HOM05D001298 ORTHO05D001110 9.2e-12 73.9 79 54.4
Nn6g35070 Nelumbo nucifera HOM05D001298 ORTHO05D001110 9.2e-12 73.9 95 48.4
CANSAT80G2467 Cannabis sativa HOM05D001298 ORTHO05D001110 1.6e-11 73.2 84 51.2
Glyma.19G190800 Glycine max HOM05D001298 ORTHO05D001110 1.6e-11 73.2 95 48.4
Dinv21266 Davidia involucrata HOM05D001298 ORTHO05D001110 3.5e-11 72.0 100 48.0
RcHm_v2.0_Chr3g0471981 Rosa chinensis HOM05D001298 ORTHO05D001110 3.5e-11 72.0 104 47.1
Aqoxy2G01457 Aquilegia oxysepala HOM05D001298 ORTHO05D001110 4.6e-11 71.6 90 48.9
Haze_19527 Corylus avellana HOM05D001298 ORTHO05D001110 4.6e-11 71.6 75 54.7
Cfa016528 Carpinus fangiana HOM05D001298 ORTHO05D001110 6.0e-11 71.2 78 55.1
TAR633G1376 Trochodendron aralioides HOM05D001298 ORTHO05D001110 6.0e-11 71.2 76 53.9
Duzib106G0212 Durio zibethinus HOM05D001298 ORTHO05D001110 1.0e-10 70.5 85 49.4
FvH4_6g17760 Fragaria vesca HOM05D001298 ORTHO05D001110 1.0e-10 70.5 80 51.2
FAN14G5507 Fragaria x ananassa HOM05D001298 ORTHO05D001110 1.0e-10 70.5 80 51.2
Dinv19819 Davidia involucrata HOM05D001298 ORTHO05D001110 1.3e-10 70.1 88 48.9
TAR636G3167 Trochodendron aralioides HOM05D001298 ORTHO05D001110 1.7e-10 69.7 94 45.7
arahy.Tifrunner.gnm1.ann1.5HS8E4 Arachis hypogaea HOM05D001298 ORTHO05D001110 2.3e-10 69.3 87 44.8
arahy.Tifrunner.gnm1.ann1.TW40KZ Arachis hypogaea HOM05D001298 ORTHO05D001110 2.3e-10 69.3 87 44.8
CiPaw.09G008000 Carya illinoinensis HOM05D001298 ORTHO05D001110 2.3e-10 69.3 81 50.6
HanXRQChr08g0228231 Helianthus annuus HOM05D001298 ORTHO05D001110 2.3e-10 69.3 81 49.4
TAR636G2799 Trochodendron aralioides HOM05D001298 ORTHO05D001110 2.3e-10 69.3 94 45.7
PSO339G6162 Papaver somniferum HOM05D001298 ORTHO05D001110 3.0e-10 68.9 83 48.2
FAN05G0567 Fragaria x ananassa HOM05D001298 ORTHO05D001110 3.9e-10 68.6 80 50.0
FAN05G5445 Fragaria x ananassa HOM05D001298 ORTHO05D001110 3.9e-10 68.6 80 50.0
FAN09G4601 Fragaria x ananassa HOM05D001298 ORTHO05D001110 3.9e-10 68.6 80 50.0
TWI53G0578 Tripterygium wilfordii HOM05D001298 ORTHO05D001110 5.1e-10 68.2 82 47.6
Phvul.001G186000 Phaseolus vulgaris HOM05D001298 ORTHO05D001110 6.6e-10 67.8 85 49.4
Potri.013G102100 Populus trichocarpa HOM05D001298 ORTHO05D001110 6.6e-10 67.8 96 45.8
VMungo1383G2071 Vigna mungo HOM05D001298 ORTHO05D001110 6.6e-10 67.8 85 49.4
PSO384G1722 Papaver somniferum HOM05D001298 ORTHO05D001110 8.6e-10 67.4 96 45.8
Gorai.002G243200 Gossypium raimondii HOM05D001298 ORTHO05D001110 1.5e-09 66.6 71 49.3
Oeu038892.1 Olea europaea HOM05D001298 ORTHO05D001110 1.5e-09 66.6 86 48.8
CiPaw.10G004700 Carya illinoinensis HOM05D001298 ORTHO05D001110 1.9e-09 66.2 93 45.2
COL.COLO4_29825 Corchorus olitorius HOM05D001298 ORTHO05D001110 1.9e-09 66.2 71 50.7
Thecc.05G080200 Theobroma cacao HOM05D001298 ORTHO05D001110 2.5e-09 65.9 71 50.7
Gohir.D01G198800 Gossypium hirsutum HOM05D001298 ORTHO05D001110 3.3e-09 65.5 87 44.8
CSS0005328 Camellia sinensis var. sinensis HOM05D001298 ORTHO05D001110 5.6e-09 64.7 81 43.2
Gohir.A01G209900 Gossypium hirsutum HOM05D001298 ORTHO05D001110 5.6e-09 64.7 71 47.9
Nitab4.5_0001922g0060 Nicotiana tabacum HOM05D001298 ORTHO05D001110 5.6e-09 64.7 95 42.1
Sc02g0001180 Simmondsia chinensis HOM05D001298 ORTHO05D001110 5.6e-09 64.7 98 41.8
CAN.G1138.8 Capsicum annuum HOM05D001298 ORTHO05D001110 7.3e-09 64.3 71 49.3
Actinidia31295 Actinidia chinensis HOM05D001298 ORTHO05D001110 9.5e-09 63.9 84 42.9
Nitab4.5_0005504g0020 Nicotiana tabacum HOM05D001298 ORTHO05D001110 9.5e-09 63.9 81 46.9
Nitab4.5_0011483g0020 Nicotiana tabacum HOM05D001298 ORTHO05D001110 9.5e-09 63.9 111 39.6
PGR004G0235 Punica granatum HOM05D001298 ORTHO05D001110 1.2e-08 63.5 83 45.8
Actinidia10404 Actinidia chinensis HOM05D001298 ORTHO05D001110 1.6e-08 63.2 84 44.0
Nitab4.5_0000132g0220 Nicotiana tabacum HOM05D001298 ORTHO05D001110 1.6e-08 63.2 106 40.6
Lsat_1_v5_gn_6_27001 Lactuca sativa HOM05D001298 ORTHO05D001110 2.8e-08 62.4 70 50.0
PGSC0003DMG401002721 Solanum tuberosum HOM05D001298 ORTHO05D001110 2.8e-08 62.4 90 51.1
Thhalv10010680m.g Eutrema salsugineum HOM05D001298 ORTHO05D001110 4.7e-08 61.6 74 45.9
Peaxi162Scf01196g00023 Petunia axillaris HOM05D001298 ORTHO05D001110 4.7e-08 61.6 101 45.5
BcaB01g00321 Brassica carinata HOM05D001298 ORTHO05D001110 6.2e-08 61.2 74 45.9
Lsat_1_v5_gn_2_21441 Lactuca sativa HOM05D001298 ORTHO05D001110 6.2e-08 61.2 99 40.4
Duzib093G1714 Durio zibethinus HOM05D001298 ORTHO05D001110 8.1e-08 60.8 71 47.9
Sp5g09360 Schrenkiella parvula HOM05D001298 ORTHO05D001110 8.1e-08 60.8 71 49.3
Aa31LG10G8170 Aethionema arabicum HOM05D001298 ORTHO05D001110 1.1e-07 60.5 71 45.1
Manes.09G060644 Manihot esculenta HOM05D001298 ORTHO05D001110 1.1e-07 60.5 101 39.6
PGSC0003DMG400028266 Solanum tuberosum HOM05D001298 ORTHO05D001110 1.1e-07 60.5 81 43.2
SGA_v2.0_scaffold35G14103 Striga asiatica HOM05D001298 ORTHO05D001110 1.4e-07 60.1 80 46.2
Carub.0005s1946 Capsella rubella HOM05D001298 ORTHO05D001110 1.8e-07 59.7 71 46.5
HanXRQChr13g0399961 Helianthus annuus HOM05D001298 ORTHO05D001110 1.8e-07 59.7 84 40.5
BcaC07g39660 Brassica carinata HOM05D001298 ORTHO05D001110 2.3e-07 59.3 71 47.9
C08p28270 Brassica napus HOM05D001298 ORTHO05D001110 2.3e-07 59.3 71 47.9
BolC8t50438H Brassica oleracea HOM05D001298 ORTHO05D001110 2.3e-07 59.3 71 47.9
BraA09t40067Z Brassica rapa HOM05D001298 ORTHO05D001110 2.3e-07 59.3 71 47.9
AT3G52960 Arabidopsis thaliana HOM05D001298 ORTHO05D001110 3.1e-07 58.9 71 45.1
A09p46040 Brassica napus HOM05D001298 ORTHO05D001110 3.1e-07 58.9 71 46.5
BraA04t16359Z Brassica rapa HOM05D001298 ORTHO05D001110 3.1e-07 58.9 71 46.5
CARHR162860 Cardamine hirsuta HOM05D001298 ORTHO05D001110 3.1e-07 58.9 73 45.2
CDE10G0183 Ceratophyllum demersum HOM05D001298 ORTHO05D001110 3.1e-07 58.9 82 43.9
ATR0820G018 Amborella trichopoda HOM05D001298 ORTHO05D001110 5.2e-07 58.2 99 38.4
Peaxi162Scf00110g00183 Petunia axillaris HOM05D001298 ORTHO05D001110 6.8e-07 57.8 119 35.3
unitig_8.g4961 Utricularia gibba HOM05D001298 ORTHO05D001110 6.8e-07 57.8 78 42.3
Lj2P128T31 Lonicera japonica HOM05D001298 ORTHO05D001110 8.9e-07 57.4 90 38.9
AL5G33770 Arabidopsis lyrata HOM05D001298 ORTHO05D001110 1.2e-06 57.0 93 38.7
A04p06550 Brassica napus HOM05D001298 ORTHO05D001110 1.2e-06 57.0 71 45.1
ECA233G6073 Erigeron canadensis HOM05D001298 ORTHO05D001110 1.2e-06 57.0 70 44.3
SEGI_07747 Sequoiadendron giganteum HOM05D001298 ORTHO05D001110 1.2e-06 57.0 90 41.1
BcaC02g09200 Brassica carinata HOM05D001298 ORTHO05D001110 1.5e-06 56.6 71 45.1
Pp3c3_490 Physcomitrium patens HOM05D001298 ORTHO05D001110 1.5e-06 56.6 69 42.0
THA.LOC104823470 Tarenaya hassleriana HOM05D001298 ORTHO05D001110 1.5e-06 56.6 70 42.9
BraA04t16357Z Brassica rapa HOM05D001298 ORTHO05D001110 2.0e-06 56.2 71 45.1
Pp3c13_7010 Physcomitrium patens HOM05D001298 ORTHO05D001110 2.0e-06 56.2 68 44.1
SGA_v2.0_scaffold184G39921 Striga asiatica HOM05D001298 ORTHO05D001110 4.4e-06 55.1 89 37.1
SGA_v2.0_scaffold35G14101 Striga asiatica HOM05D001298 ORTHO05D001110 4.4e-06 55.1 65 44.6
ECA234G3315 Erigeron canadensis HOM05D001298 ORTHO05D001110 5.8e-06 54.7 96 39.6


User provided reference genes

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