Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1032T28 Lonicera japonica HOM05D002799 ORTHO05D008889 5.9e-83 310.8 159 100.0
Actinidia08736 Actinidia chinensis HOM05D002799 ORTHO05D008889 1.5e-57 226.5 154 74.0
vmacro06499 Vaccinium macrocarpon HOM05D002799 ORTHO05D008889 2.8e-56 222.2 155 72.3
Manes.08G164500 Manihot esculenta HOM05D002799 ORTHO05D008889 6.1e-56 221.1 155 72.9
Rhsim03G0220500 Rhododendron simsii HOM05D000526 ORTHO05D000956 6.1e-56 221.1 155 71.6
CSS0012005 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.4e-55 219.9 155 72.3
CSS0036576 Camellia sinensis var. sinensis HOM05D002799 ORTHO05D008889 1.4e-55 219.9 155 72.3
Dinv29173 Davidia involucrata HOM05D002799 ORTHO05D008889 1.4e-55 219.9 158 70.3
Cc05_g12950 Coffea canephora HOM05D002799 ORTHO05D008889 5.2e-55 218.0 156 70.5
DCAR_010548 Daucus carota HOM05D002799 ORTHO05D008889 6.8e-55 217.6 151 71.5
PGSC0003DMG400024993 Solanum tuberosum HOM05D002799 ORTHO05D008889 2.0e-54 216.1 155 69.0
Ciclev10032834m.g Citrus clementina HOM05D002799 ORTHO05D008889 4.4e-54 214.9 158 70.3
ECA236G2689 Erigeron canadensis HOM05D002799 ORTHO05D008889 4.4e-54 214.9 158 67.7
Haze_00591 Corylus avellana HOM05D002799 ORTHO05D008889 5.7e-54 214.5 154 72.7
Nitab4.5_0000207g0420 Nicotiana tabacum HOM05D002799 ORTHO05D008889 5.7e-54 214.5 155 69.0
RcHm_v2.0_Chr1g0383841 Rosa chinensis HOM05D002799 ORTHO05D008889 7.5e-54 214.2 156 68.6
TAR629G0193 Trochodendron aralioides HOM05D002799 ORTHO05D008889 9.8e-54 213.8 155 68.4
MSTRG.17884 Avicennia marina HOM05D002799 ORTHO05D008889 1.3e-53 213.4 158 69.0
Oeu053393.1 Olea europaea HOM05D002799 ORTHO05D008889 1.3e-53 213.4 159 69.2
Nitab4.5_0002229g0090 Nicotiana tabacum HOM05D002799 ORTHO05D008889 2.2e-53 212.6 155 68.4
QL09p025834 Quercus lobata HOM05D002799 ORTHO05D008889 2.9e-53 212.2 154 71.4
FvH4_7g33580 Fragaria vesca HOM05D002799 ORTHO05D008889 3.7e-53 211.8 156 66.0
FvH4_7g33591 Fragaria vesca HOM05D002799 ORTHO05D008889 3.7e-53 211.8 156 66.0
CANSAT21G1155 Cannabis sativa HOM05D002799 ORTHO05D008889 4.9e-53 211.5 155 69.0
FAN01G1859 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.3e-53 211.1 156 66.7
FAN10G0267 Fragaria x ananassa HOM05D002799 ORTHO05D007076 6.3e-53 211.1 156 66.7
FAN03G1078 Fragaria x ananassa HOM05D002799 ORTHO05D007076 1.4e-52 209.9 156 66.0
CiPaw.05G237000 Carya illinoinensis HOM05D002799 ORTHO05D008889 3.2e-52 208.8 154 70.1
CAN.G1110.21 Capsicum annuum HOM05D002799 ORTHO05D008889 4.1e-52 208.4 154 68.2
Lsat_1_v5_gn_5_146100 Lactuca sativa HOM05D002799 ORTHO05D008889 4.1e-52 208.4 155 66.5
Lsat_1_v5_gn_8_74380 Lactuca sativa HOM05D002799 ORTHO05D008889 4.1e-52 208.4 155 66.5
MD07G1305700 Malus domestica HOM05D002799 ORTHO05D008889 4.1e-52 208.4 158 67.7
Sopen10g002540 Solanum pennellii HOM05D002799 ORTHO05D008889 4.1e-52 208.4 155 67.1
GSVIVG01024450001 Vitis vinifera HOM05D002799 ORTHO05D008889 4.1e-52 208.4 155 68.4
Eucgr.K03383 Eucalyptus grandis HOM05D002799 ORTHO05D008889 5.4e-52 208.0 155 68.4
SGA_v2.0_scaffold70G23573 Striga asiatica HOM05D002799 ORTHO05D008889 1.2e-51 206.8 156 68.6
Peaxi162Scf00257g00081 Petunia axillaris HOM05D002799 ORTHO05D008889 1.6e-51 206.5 155 68.4
Prupe.2G323800 Prunus persica HOM05D002799 ORTHO05D008889 2.0e-51 206.1 156 67.9
Thecc.04G001600 Theobroma cacao HOM05D002799 ORTHO05D008889 2.0e-51 206.1 158 66.5
Duzib133G0126 Durio zibethinus HOM05D002799 ORTHO05D008889 3.5e-51 205.3 158 67.7
Atru.chr12.2012 Acer truncatum HOM05D002799 ORTHO05D008889 4.6e-51 204.9 154 68.2
Potri.019G048200 Populus trichocarpa HOM05D002799 ORTHO05D008889 4.6e-51 204.9 155 65.8
Nn1g02011 Nelumbo nucifera HOM05D002799 ORTHO05D008889 1.0e-50 203.8 155 67.1
Gohir.D11G175400 Gossypium hirsutum HOM05D002799 ORTHO05D008889 2.9e-50 202.2 155 69.0
Gorai.007G188000 Gossypium raimondii HOM05D002799 ORTHO05D008889 3.9e-50 201.8 155 69.0
Sabra19G0057600 Salix brachista HOM05D002799 ORTHO05D008889 3.9e-50 201.8 155 65.8
TWI60G0329 Tripterygium wilfordii HOM05D002799 ORTHO05D008889 3.9e-50 201.8 150 67.3
arahy.Tifrunner.gnm1.ann1.LMI616 Arachis hypogaea HOM05D002799 ORTHO05D008889 8.6e-50 200.7 154 66.2
Gohir.A11G169200 Gossypium hirsutum HOM05D002799 ORTHO05D008889 1.5e-49 199.9 155 68.4
arahy.Tifrunner.gnm1.ann1.10QB4Z Arachis hypogaea HOM05D002799 ORTHO05D008889 3.3e-49 198.7 154 65.6
arahy.Tifrunner.gnm1.ann1.31RF02 Arachis hypogaea HOM05D002799 ORTHO05D008889 5.6e-49 198.0 154 65.6
Migut.M01834 Erythranthe guttata HOM05D002799 ORTHO05D008889 5.6e-49 198.0 158 63.3
MELO3C005426.2 Cucumis melo HOM05D002799 ORTHO05D008889 9.5e-49 197.2 154 64.3
Medtr8g063470 Medicago truncatula HOM05D002799 ORTHO05D008889 9.5e-49 197.2 155 62.6
arahy.Tifrunner.gnm1.ann1.B4EAVD Arachis hypogaea HOM05D002799 ORTHO05D008889 1.2e-48 196.8 154 64.9
THA.LOC104803694 Tarenaya hassleriana HOM05D002799 ORTHO05D008889 1.2e-48 196.8 154 63.6
TPR.G670 Trifolium pratense HOM05D002799 ORTHO05D008889 1.2e-48 196.8 155 63.2
Nn3g19277 Nelumbo nucifera HOM05D002799 ORTHO05D008889 2.8e-48 195.7 155 61.9
CsaV3_5G005340 Cucumis sativus L. HOM05D002799 ORTHO05D008889 4.0e-47 191.8 151 63.6
Lalb_Chr09g0335071 Lupinus albus HOM05D002799 ORTHO05D008889 5.2e-47 191.4 156 60.9
Glyma.18G134600 Glycine max HOM05D002799 ORTHO05D008889 8.9e-47 190.7 153 64.1
unitig_746.g26651 Utricularia gibba HOM05D002799 ORTHO05D008889 8.9e-47 190.7 154 63.0
VMungo0251G2787 Vigna mungo HOM05D002799 ORTHO05D008889 8.9e-47 190.7 157 62.4
Sed0001745 Sechium edule HOM05D002799 ORTHO05D008889 2.0e-46 189.5 154 63.6
Phvul.003G054200 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 6.4e-45 184.5 157 59.9
EL10Ac3g05099 Beta vulgaris HOM05D002799 ORTHO05D008889 1.1e-44 183.7 158 59.5
Phvul.003G053900 Phaseolus vulgaris HOM05D002799 ORTHO05D008889 1.1e-44 183.7 157 59.9
Lj4g0019925 Lotus japonicus HOM05D002799 ORTHO05D008889 1.4e-44 183.3 148 61.5
AUR62028150 Chenopodium quinoa HOM05D002799 ORTHO05D008889 1.9e-44 183.0 157 59.2
Glyma.08G289900 Glycine max HOM05D002799 ORTHO05D008889 1.9e-44 183.0 154 61.7
AL3G49530 Arabidopsis lyrata HOM05D002799 ORTHO05D008889 3.5e-43 178.7 158 55.7
AT2G16790 Arabidopsis thaliana HOM05D002799 ORTHO05D008889 4.6e-43 178.3 154 57.1
Carub.0003s3061 Capsella rubella HOM05D002799 ORTHO05D008889 4.6e-43 178.3 154 57.1
Aa31LG8G14030 Aethionema arabicum HOM05D002799 ORTHO05D008889 6.0e-43 177.9 156 57.1
CARHR107040 Cardamine hirsuta HOM05D002799 ORTHO05D008889 6.0e-43 177.9 154 57.8
BcaC04g23004 Brassica carinata HOM05D002799 ORTHO05D008889 7.8e-43 177.6 154 55.2
C09p13130 Brassica napus HOM05D002799 ORTHO05D008889 7.8e-43 177.6 154 55.2
BolC9t54208H Brassica oleracea HOM05D002799 ORTHO05D008889 7.8e-43 177.6 154 55.2
A09p11140 Brassica napus HOM05D002799 ORTHO05D008889 1.0e-42 177.2 158 53.8
BcaB07g31750 Brassica carinata HOM05D002799 ORTHO05D008889 1.7e-42 176.4 154 56.5
Ah.04g157280 Amaranthus hybridus HOM05D002799 ORTHO05D008889 2.3e-42 176.0 157 56.7
Sp3g29930 Schrenkiella parvula HOM05D002799 ORTHO05D008889 2.3e-42 176.0 155 56.1
BraA09t36756Z Brassica rapa HOM05D002799 ORTHO05D008889 5.0e-42 174.9 158 52.5
Thhalv10022876m.g Eutrema salsugineum HOM05D002799 ORTHO05D008889 1.9e-41 172.9 155 58.1
Os06g0114650 Oryza sativa ssp. japonica HOM05D002799 ORTHO05D008889 3.3e-41 172.2 152 55.9
Aqoxy7G00884 Aquilegia oxysepala HOM05D002799 ORTHO05D008889 1.2e-40 170.2 141 62.4
PGR004G1571 Punica granatum HOM05D002799 ORTHO05D008889 3.6e-40 168.7 131 66.4
Sc19g0000240 Simmondsia chinensis HOM05D002799 ORTHO05D008889 4.7e-40 168.3 131 64.1
COL.COLO4_19775 Corchorus olitorius HOM05D002799 ORTHO05D008889 6.2e-40 167.9 134 64.9
PSO717G0064 Papaver somniferum HOM05D002799 ORTHO05D008889 4.0e-39 165.2 173 53.8
PSO675G5486 Papaver somniferum HOM05D002799 ORTHO05D008889 5.2e-39 164.9 173 54.3
ClCG01G005050 Citrullus lanatus HOM05D002799 ORTHO05D008889 6.8e-39 164.5 132 62.9
Solyc10g006600.4 Solanum lycopersicum HOM05D002799 ORTHO05D008889 6.8e-39 164.5 119 67.2
ATR0829G224 Amborella trichopoda HOM05D002799 ORTHO05D008889 2.9e-37 159.1 179 48.6
Ca_14681_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 6.4e-37 157.9 132 60.6
Psat4g127040 Pisum sativum HOM05D002799 ORTHO05D008889 1.1e-36 157.1 132 59.1
TPR.G26908 Trifolium pratense HOM05D002799 ORTHO05D008889 1.1e-36 157.1 126 62.7
Pp3c5_2750 Physcomitrium patens HOM05D002799 ORTHO05D008889 6.2e-32 141.4 180 46.7
AagrBONN_evm.TU.Sc2ySwM_362.1504 Anthoceros agrestis HOM05D002799 ORTHO05D008889 5.2e-31 138.3 165 44.8
Mapoly0046s0106 Marchantia polymorpha HOM05D002799 ORTHO05D008889 1.5e-30 136.7 161 45.3
Rhsim03G0164800 Rhododendron simsii HOM05D002799 ORTHO05D008889 5.8e-30 134.8 106 67.0
SMO174G0264 Selaginella moellendorffii HOM05D002799 ORTHO05D008889 2.1e-27 126.3 160 43.8
PSO675G4133 Papaver somniferum HOM05D002799 ORTHO05D008889 8.6e-26 120.9 158 44.9
MD01G1233600 Malus domestica HOM05D002799 ORTHO05D008889 2.1e-24 116.3 84 65.5
SHI03438 Sapria himalayana HOM05D002799 ORTHO05D008889 4.0e-23 112.1 131 47.3
HPP92_002455 Vanilla planifolia HOM05D002799 ORTHO05D008889 3.4e-22 109.0 113 49.6
Cre08.g385750 Chlamydomonas reinhardtii HOM05D002799 ORTHO05D008889 8.7e-18 94.4 168 35.7
BcaB03g16409 Brassica carinata HOM05D002799 ORTHO05D008889 1.3e-16 90.5 110 42.7
MCO08G110 Micromonas commoda HOM05D002799 ORTHO05D008889 3.1e-15 85.9 124 42.7
C07p06790 Brassica napus HOM05D002799 ORTHO05D008889 5.3e-15 85.1 134 40.3
HanXRQChr10g0305151 Helianthus annuus HOM05D002799 ORTHO05D008889 2.6e-14 82.8 48 77.1
PRCOL_00003203 Prasinoderma coloniale HOM05D002799 ORTHO05D008889 4.4e-14 82.0 150 38.0
Cfa026682 Carpinus fangiana HOM05D002799 ORTHO05D008889 1.1e-12 77.4 136 34.6
Ca_28676_v3 Cicer arietinum L. HOM05D002799 ORTHO05D008889 1.4e-12 77.0 147 36.7


User provided reference genes

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