Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1P1026T15 Lonicera japonica HOM05D002635 ORTHO05D002756 1.7e-94 349.4 178 100.0
Sopen06g018300 Solanum pennellii HOM05D002635 ORTHO05D002756 1.3e-46 190.3 160 58.8
Solyc06g053230.4 Solanum lycopersicum HOM05D002635 ORTHO05D002756 1.7e-46 189.9 158 58.9
PGSC0003DMG400030232 Solanum tuberosum HOM05D002635 ORTHO05D002756 1.7e-46 189.9 158 58.9
Peaxi162Scf00618g00019 Petunia axillaris HOM05D002635 ORTHO05D002756 1.8e-43 179.9 175 53.1
Oeu037030.1 Olea europaea HOM05D002635 ORTHO05D002756 5.6e-42 174.9 175 50.9
Oeu061018.1 Olea europaea HOM05D002635 ORTHO05D002756 1.6e-41 173.3 175 51.4
Dinv35371 Davidia involucrata HOM05D002635 ORTHO05D002756 6.2e-41 171.4 172 50.0
Actinidia08684 Actinidia chinensis HOM05D002635 ORTHO05D002756 2.4e-40 169.5 166 51.8
QL09p007458 Quercus lobata HOM05D002635 ORTHO05D002756 6.9e-40 167.9 162 51.9
vmacro06424 Vaccinium macrocarpon HOM05D002635 ORTHO05D002756 6.9e-40 167.9 171 50.9
MSTRG.26992 Avicennia marina HOM05D002635 ORTHO05D002756 2.0e-39 166.4 160 51.2
Lj3P898T29 Lonicera japonica HOM05D002635 ORTHO05D002756 2.9e-38 162.5 152 55.3
Nitab4.5_0001865g0020 Nicotiana tabacum HOM05D002635 ORTHO05D002756 7.1e-37 157.9 137 58.4
Migut.F00164 Erythranthe guttata HOM05D002635 ORTHO05D002756 1.6e-36 156.8 153 51.0
Dinv29229 Davidia involucrata HOM05D002635 ORTHO05D002756 2.7e-36 156.0 162 51.9
Migut.F01000 Erythranthe guttata HOM05D002635 ORTHO05D002756 3.0e-35 152.5 162 50.6
Lalb_Chr23g0271821 Lupinus albus HOM05D002635 ORTHO05D002756 3.0e-35 152.5 180 43.3
Rhsim03G0213500 Rhododendron simsii HOM05D002635 ORTHO05D002756 3.0e-35 152.5 172 48.3
VMungo1309G2217 Vigna mungo HOM05D002635 ORTHO05D002756 5.1e-35 151.8 166 47.6
CiPaw.05G202500 Carya illinoinensis HOM05D002635 ORTHO05D002756 6.7e-35 151.4 166 47.6
Glyma.04G231300 Glycine max HOM05D002635 ORTHO05D002756 6.7e-35 151.4 174 48.9
MSTRG.38 Avicennia marina HOM05D002635 ORTHO05D002756 2.5e-34 149.4 167 50.9
Glyma.06G133900 Glycine max HOM05D002635 ORTHO05D002756 3.3e-34 149.1 161 46.6
SalBow4G0860 Salvia bowleyana HOM05D002635 ORTHO05D002756 9.7e-34 147.5 153 50.3
Phvul.009G049800 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 1.3e-33 147.1 155 48.4
PGSC0003DMG400003229 Solanum tuberosum HOM05D002635 ORTHO05D002756 1.1e-32 144.1 160 47.5
MD07G1297300 Malus domestica HOM05D002635 ORTHO05D002756 1.4e-32 143.7 168 45.8
TWI14G1040 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 1.4e-32 143.7 165 48.5
Medtr3g092200 Medicago truncatula HOM05D002635 ORTHO05D002756 1.8e-32 143.3 155 45.8
Ca_16753_v3 Cicer arietinum L. HOM05D002635 ORTHO05D002756 3.1e-32 142.5 157 45.2
DCAR_012356 Daucus carota HOM05D002635 ORTHO05D002756 9.0e-32 141.0 155 49.0
Lj1g0010184 Lotus japonicus HOM05D002635 ORTHO05D002756 9.0e-32 141.0 174 41.4
Sopen03g022290 Solanum pennellii HOM05D002635 ORTHO05D002756 9.0e-32 141.0 160 46.9
FvH4_7g32590 Fragaria vesca HOM05D002635 ORTHO05D002756 1.2e-31 140.6 179 41.9
PGR142G4371 Punica granatum HOM05D002635 ORTHO05D002756 1.2e-31 140.6 158 45.6
unitig_37.g11991 Utricularia gibba HOM05D002635 ORTHO05D002756 2.0e-31 139.8 152 48.0
CAN.G1527.11 Capsicum annuum HOM05D002635 ORTHO05D002756 2.6e-31 139.4 161 46.0
ClCG07G009840 Citrullus lanatus HOM05D002635 ORTHO05D002756 4.5e-31 138.7 153 49.0
FAN10G2062 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.0e-30 137.5 159 44.0
Prupe.2G316900 Prunus persica HOM05D002635 ORTHO05D002756 1.3e-30 137.1 173 43.4
FAN10G0171 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.7e-30 136.7 159 44.0
MD01G1227000 Malus domestica HOM05D002635 ORTHO05D002756 2.9e-30 136.0 157 45.9
Psat5g073760 Pisum sativum HOM05D002635 ORTHO05D002756 2.9e-30 136.0 180 42.8
FAN03G2192 Fragaria x ananassa HOM05D002635 ORTHO05D002756 3.8e-30 135.6 178 42.1
Lalb_Chr08g0239831 Lupinus albus HOM05D002635 ORTHO05D002756 1.1e-29 134.0 150 43.3
Duzib084G0218 Durio zibethinus HOM05D002635 ORTHO05D002756 1.9e-29 133.3 178 42.7
RcHm_v2.0_Chr1g0382461 Rosa chinensis HOM05D002635 ORTHO05D002756 1.9e-29 133.3 163 43.6
TPR.G33648 Trifolium pratense HOM05D002635 ORTHO05D002756 1.9e-29 133.3 163 41.7
Cpa.g.sc3.141 Carica papaya HOM05D002635 ORTHO05D002756 3.2e-29 132.5 136 47.8
Nn1g00396 Nelumbo nucifera HOM05D002635 ORTHO05D002756 4.2e-29 132.1 170 44.7
Potri.012G023500 Populus trichocarpa HOM05D002635 ORTHO05D002756 4.2e-29 132.1 150 47.3
Duzib205G1289 Durio zibethinus HOM05D002635 ORTHO05D002756 5.5e-29 131.7 158 43.7
Cfa016178 Carpinus fangiana HOM05D002635 ORTHO05D002756 3.6e-28 129.0 125 53.6
Duzib068G1338 Durio zibethinus HOM05D002635 ORTHO05D002756 3.6e-28 129.0 168 42.3
Manes.01G039000 Manihot esculenta HOM05D002635 ORTHO05D002756 1.9e-26 123.2 149 47.0
Lsat_1_v5_gn_8_4621 Lactuca sativa HOM05D002635 ORTHO05D002756 3.3e-26 122.5 148 44.6
COL.COLO4_14346 Corchorus olitorius HOM05D002635 ORTHO05D002756 4.3e-26 122.1 152 45.4
THA.LOC104813274 Tarenaya hassleriana HOM05D002635 ORTHO05D002756 4.3e-26 122.1 165 40.6
CsaV3_4G008490 Cucumis sativus L. HOM05D002635 ORTHO05D002756 5.7e-26 121.7 146 44.5
Ciclev10021220m.g Citrus clementina HOM05D002635 ORTHO05D002756 7.4e-26 121.3 157 40.1
TAR362G0126 Trochodendron aralioides HOM05D002635 ORTHO05D002756 7.4e-26 121.3 131 47.3
Gohir.A08G097800 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.3e-25 120.6 149 43.6
Thecc.03G206200 Theobroma cacao HOM05D002635 ORTHO05D002756 2.8e-25 119.4 165 43.0
Gohir.D08G114700 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.1e-24 117.5 149 43.0
Gorai.004G123600 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.1e-24 117.5 149 43.0
Manes.05G193600 Manihot esculenta HOM05D002635 ORTHO05D002756 4.1e-24 115.5 149 47.0
Peaxi162Scf00740g00054 Petunia axillaris HOM05D002635 ORTHO05D002756 5.3e-24 115.2 135 45.2
Sed0007409 Sechium edule HOM05D002635 ORTHO05D002756 2.0e-23 113.2 148 43.2
CANSAT21G1331 Cannabis sativa HOM05D002635 ORTHO05D002756 3.4e-23 112.5 163 40.5
Aqoxy7G00018 Aquilegia oxysepala HOM05D002635 ORTHO05D002756 3.8e-22 109.0 157 40.8
MELO3C016080.2 Cucumis melo HOM05D002635 ORTHO05D002756 5.0e-22 108.6 124 45.2
PSO782G2007 Papaver somniferum HOM05D002635 ORTHO05D002756 8.5e-22 107.8 155 41.3
Atru.chr12.2359 Acer truncatum HOM05D002635 ORTHO05D002756 9.4e-21 104.4 162 38.3
PSO063G4320 Papaver somniferum HOM05D002635 ORTHO05D002756 9.4e-21 104.4 155 41.3
SGA_v2.0_scaffold141G35537 Striga asiatica HOM05D002635 ORTHO05D002756 5.1e-19 98.6 147 39.5
FAN01G2103 Fragaria x ananassa HOM05D002635 ORTHO05D002756 2.2e-17 93.2 107 43.9
Nn3g18827 Nelumbo nucifera HOM05D002635 ORTHO05D002756 1.2e-15 87.4 138 36.2
Pp3c2_5540 Physcomitrium patens HOM05D002635 ORTHO05D002756 1.3e-14 84.0 165 35.2
SEGI_28987 Sequoiadendron giganteum HOM05D002635 ORTHO05D002756 2.2e-14 83.2 178 32.0
Glyma.08G299100 Glycine max HOM05D000001 ORTHO05D002756 1.4e-13 80.5 88 43.2
Pp3c1_36080 Physcomitrium patens HOM05D002635 ORTHO05D002756 1.4e-13 80.5 177 32.8
Mapoly0003s0203 Marchantia polymorpha HOM05D002635 ORTHO05D002756 1.6e-12 77.0 188 31.9
SEGI_27222 Sequoiadendron giganteum HOM05D002635 ORTHO05D002756 2.7e-12 76.3 165 33.3
Nitab4.5_0007028g0010 Nicotiana tabacum HOM05D002635 ORTHO05D002756 8.0e-12 74.7 109 40.4
SMO266G0089 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 2.0e-10 70.1 172 27.9
Nitab4.5_0000015g0110 Nicotiana tabacum HOM05D002635 ORTHO05D002756 2.6e-10 69.7 72 50.0
ATR0620G159 Amborella trichopoda HOM05D002635 ORTHO05D002756 1.3e-09 67.4 152 30.3
VMungo0540G0642 Vigna mungo HOM05D002635 ORTHO05D002756 1.3e-09 67.4 156 28.2
HPP92_000459 Vanilla planifolia HOM05D002635 ORTHO05D002756 1.7e-09 67.0 105 36.2
CiPaw.05G002800 Carya illinoinensis HOM05D002635 ORTHO05D002756 2.8e-09 66.2 156 27.6
Medtr2g005260 Medicago truncatula HOM05D002635 ORTHO05D002756 4.8e-09 65.5 157 29.3
Rhsim05G0116700 Rhododendron simsii HOM05D002635 ORTHO05D002756 4.8e-09 65.5 154 28.6
FAN08G2963 Fragaria x ananassa HOM05D002635 ORTHO05D002756 6.3e-09 65.1 153 31.4
Glyma.16G001300 Glycine max HOM05D002635 ORTHO05D002756 6.3e-09 65.1 157 29.9
Solyc03g082540.4 Solanum lycopersicum HOM05D002635 ORTHO05D002756 6.3e-09 65.1 160 29.4
Prupe.1G582400 Prunus persica HOM05D002635 ORTHO05D002756 8.2e-09 64.7 153 30.1
Psat1g223800 Pisum sativum HOM05D002635 ORTHO05D002756 1.1e-08 64.3 157 28.0
FvH4_5g28140 Fragaria vesca HOM05D002635 ORTHO05D002756 1.4e-08 63.9 149 29.5
FAN04G1944 Fragaria x ananassa HOM05D002635 ORTHO05D002756 1.4e-08 63.9 149 29.5
Glyma.12G165000 Glycine max HOM05D002635 ORTHO05D002756 2.4e-08 63.2 153 28.1
Potri.004G227000 Populus trichocarpa HOM05D002635 ORTHO05D002756 2.4e-08 63.2 153 27.5
Lj6g0026247 Lotus japonicus HOM05D002635 ORTHO05D002756 3.1e-08 62.8 157 28.0
Oeu010215.1 Olea europaea HOM05D002635 ORTHO05D002756 3.1e-08 62.8 153 27.5
QL02p101856 Quercus lobata HOM05D002635 ORTHO05D002756 3.1e-08 62.8 156 28.2
Cfa004466 Carpinus fangiana HOM05D002635 ORTHO05D002756 4.1e-08 62.4 152 28.9
Mapoly0076s0026 Marchantia polymorpha HOM05D002635 ORTHO05D002756 4.1e-08 62.4 106 34.0
TAR624G0320 Trochodendron aralioides HOM05D002635 ORTHO05D002756 4.1e-08 62.4 157 28.7
Peaxi162Scf01464g00029 Petunia axillaris HOM05D002635 ORTHO05D002756 5.3e-08 62.0 78 42.3
Haze_10023 Corylus avellana HOM05D002635 ORTHO05D002756 7.0e-08 61.6 152 28.9
Migut.N00855 Erythranthe guttata HOM05D002635 ORTHO05D002756 9.1e-08 61.2 152 27.6
MD08G1245000 Malus domestica HOM05D002635 ORTHO05D002756 9.1e-08 61.2 154 29.9
Manes.10G115400 Manihot esculenta HOM05D002635 ORTHO05D002756 9.1e-08 61.2 154 27.9
MBI03_g28424_MAGBIO Magnolia biondii HOM05D002635 ORTHO05D002756 1.2e-07 60.8 153 27.5
MD15G1440100 Malus domestica HOM05D002635 ORTHO05D002756 1.2e-07 60.8 153 29.4
ATR1089G101 Amborella trichopoda HOM05D002635 ORTHO05D002756 1.6e-07 60.5 161 28.0
CSS0009773 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 1.6e-07 60.5 154 27.9
Ca_00022_v3 Cicer arietinum L. HOM05D002635 ORTHO05D002756 1.6e-07 60.5 156 26.9
COL.COLO4_17694 Corchorus olitorius HOM05D002635 ORTHO05D002756 1.6e-07 60.5 157 28.7
DCAR_006659 Daucus carota HOM05D002635 ORTHO05D002756 1.6e-07 60.5 157 29.3
Peaxi162Scf00527g00740 Petunia axillaris HOM05D002635 ORTHO05D002756 1.6e-07 60.5 78 42.3
Sabra01G0172400 Salix brachista HOM05D002635 ORTHO05D002756 1.6e-07 60.5 156 26.3
MSTRG.27874 Avicennia marina HOM05D002635 ORTHO05D002756 2.0e-07 60.1 151 29.1
CSS0014121 Camellia sinensis var. sinensis HOM05D002635 ORTHO05D002756 2.0e-07 60.1 154 27.9
Cc02_g23390 Coffea canephora HOM05D002635 ORTHO05D002756 2.0e-07 60.1 153 26.1
Medtr4g081890 Medicago truncatula HOM05D002635 ORTHO05D002756 2.0e-07 60.1 155 28.4
Thecc.02G014300 Theobroma cacao HOM05D002635 ORTHO05D002756 2.0e-07 60.1 153 27.5
TPR.G34019 Trifolium pratense HOM05D002635 ORTHO05D002756 2.0e-07 60.1 156 29.5
TAR381G0357 Trochodendron aralioides HOM05D002635 ORTHO05D002756 2.0e-07 60.1 157 27.4
HPP92_004661 Vanilla planifolia HOM05D002635 ORTHO05D002756 2.0e-07 60.1 152 25.0
Phvul.003G075300 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 2.6e-07 59.7 157 26.8
Duzib132G0923 Durio zibethinus HOM05D002635 ORTHO05D002756 3.5e-07 59.3 157 27.4
Eucgr.G00246 Eucalyptus grandis HOM05D002635 ORTHO05D002756 3.5e-07 59.3 153 28.1
Phvul.006G220600 Phaseolus vulgaris HOM05D002635 ORTHO05D002756 3.5e-07 59.3 157 28.0
Potri.003G003500 Populus trichocarpa HOM05D002635 ORTHO05D002756 4.5e-07 58.9 156 25.6
Actinidia00167 Actinidia chinensis HOM05D002635 ORTHO05D002756 5.9e-07 58.5 153 28.1
Manes.07G026600 Manihot esculenta HOM05D002635 ORTHO05D002756 5.9e-07 58.5 162 27.2
RcHm_v2.0_Chr7g0220291 Rosa chinensis HOM05D002635 ORTHO05D002756 5.9e-07 58.5 150 28.7
MSTRG.16479 Avicennia marina HOM05D002635 ORTHO05D002756 7.7e-07 58.2 154 28.6
TWI59G0859 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 7.7e-07 58.2 161 29.2
CiPaw.06G175900 Carya illinoinensis HOM05D002635 ORTHO05D002756 1.0e-06 57.8 156 26.9
CBR_g2915 Chara braunii HOM05D002635 ORTHO05D002756 1.0e-06 57.8 104 33.7
Gohir.D04G177200 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.0e-06 57.8 156 28.2
Gorai.012G170100 Gossypium raimondii HOM05D002635 ORTHO05D002756 1.0e-06 57.8 156 28.2
Hma1.2p1_0157F.1_g068985 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 1.0e-06 57.8 149 26.8
Hma1.2p1_1368F.1_g278530 Hydrangea macrophylla HOM05D002635 ORTHO05D002756 1.0e-06 57.8 149 26.8
MSTRG.5197 Avicennia marina HOM05D002635 ORTHO05D002756 1.3e-06 57.4 157 27.4
Gohir.A04G134000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 1.3e-06 57.4 156 28.8
Medtr4g081900 Medicago truncatula HOM05D002635 ORTHO05D002756 1.7e-06 57.0 157 29.3
Sabra03G0001800 Salix brachista HOM05D002635 ORTHO05D002756 1.7e-06 57.0 156 26.3
VMungo1215G1734 Vigna mungo HOM05D002635 ORTHO05D002756 1.7e-06 57.0 160 26.9
Atru.chr6.455 Acer truncatum HOM05D002635 ORTHO05D002756 2.2e-06 56.6 156 27.6
arahy.Tifrunner.gnm1.ann1.3P7FNU Arachis hypogaea HOM05D002635 ORTHO05D002756 2.2e-06 56.6 156 25.0
arahy.Tifrunner.gnm1.ann1.I3LLGY Arachis hypogaea HOM05D002635 ORTHO05D002756 2.2e-06 56.6 156 25.0
Lj9P296T23 Lonicera japonica HOM05D002635 ORTHO05D002756 2.2e-06 56.6 155 25.8
Duzib052G0871 Durio zibethinus HOM05D002635 ORTHO05D002756 2.9e-06 56.2 158 27.8
Os01g0885200 Oryza sativa ssp. japonica HOM05D002635 ORTHO05D002756 2.9e-06 56.2 154 29.2
Gohir.D02G237600 Gossypium hirsutum HOM05D002635 ORTHO05D002756 3.8e-06 55.8 174 26.4
SMO364G0496 Selaginella moellendorffii HOM05D002635 ORTHO05D002756 3.8e-06 55.8 106 29.2
unitig_26.g9163 Utricularia gibba HOM05D002635 ORTHO05D002756 3.8e-06 55.8 150 24.7
Gohir.D01G131300 Gossypium hirsutum HOM05D002635 ORTHO05D002756 5.0e-06 55.5 157 25.5
Lj5P271T19 Lonicera japonica HOM05D002635 ORTHO05D002756 5.0e-06 55.5 110 30.0
Zm00001eb145510 Zea mays HOM05D002635 ORTHO05D002756 5.0e-06 55.5 154 29.9
Ciclev10001394m.g Citrus clementina HOM05D002635 ORTHO05D002756 6.5e-06 55.1 156 27.6
Gohir.A03G216000 Gossypium hirsutum HOM05D002635 ORTHO05D002756 6.5e-06 55.1 174 27.0
Gorai.002G163000 Gossypium raimondii HOM05D002635 ORTHO05D002756 6.5e-06 55.1 157 25.5
HanXRQChr10g0299381 Helianthus annuus HOM05D002635 ORTHO05D002756 6.5e-06 55.1 147 29.3
PGR142G3898 Punica granatum HOM05D002635 ORTHO05D002756 6.5e-06 55.1 154 26.0
PGR142G4069 Punica granatum HOM05D002635 ORTHO05D002756 8.5e-06 54.7 153 25.5
SHI04877 Sapria himalayana HOM05D002635 ORTHO05D002756 8.5e-06 54.7 154 26.0
TWI23G0700 Tripterygium wilfordii HOM05D002635 ORTHO05D002756 8.5e-06 54.7 157 29.3


User provided reference genes

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