Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1E1237T0 Lonicera japonica HOM05D001567 ORTHO05D001409 1.8e-40 168.7 79 100.0
Actinidia02333 Actinidia chinensis HOM05D001567 ORTHO05D001409 4.5e-15 84.3 72 61.1
Hma1.2p1_0298F.1_g117420 Hydrangea macrophylla HOM05D001567 ORTHO05D001409 4.9e-14 80.9 82 56.1
Dinv20114 Davidia involucrata HOM05D001567 ORTHO05D001409 1.1e-13 79.7 89 51.7
Manes.17G022526 Manihot esculenta HOM05D001567 ORTHO05D001409 3.0e-11 71.6 84 51.2
Oeu007157.1 Olea europaea HOM05D001567 ORTHO05D001409 3.0e-11 71.6 82 46.3
PGR042G3932 Punica granatum HOM05D001567 ORTHO05D001409 8.7e-11 70.1 58 53.4
CSS0012763 Camellia sinensis var. sinensis HOM05D001567 ORTHO05D001409 1.1e-10 69.7 84 48.8
Peaxi162Scf00521g00072 Petunia axillaris HOM05D001567 ORTHO05D001409 1.1e-10 69.7 83 47.0
MSTRG.7186 Avicennia marina HOM05D001567 ORTHO05D001409 1.9e-10 68.9 83 48.2
Ciclev10017636m.g Citrus clementina HOM05D001567 ORTHO05D001409 9.6e-10 66.6 86 44.2
Cc09_g01120 Coffea canephora HOM05D001567 ORTHO05D001409 1.3e-09 66.2 82 46.3
Cfa000139 Carpinus fangiana HOM05D001567 ORTHO05D001409 1.6e-09 65.9 79 48.1
Nitab4.5_0002613g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 2.8e-09 65.1 86 44.2
Haze_06885 Corylus avellana HOM05D001567 ORTHO05D001409 6.2e-09 63.9 79 48.1
Nn1g03375 Nelumbo nucifera HOM05D001567 ORTHO05D001409 1.1e-08 63.2 82 42.7
Dinv39751 Davidia involucrata HOM05D001567 ORTHO05D001409 3.1e-08 61.6 87 39.1
CANSAT56G0685 Cannabis sativa HOM05D001567 ORTHO05D001409 4.0e-08 61.2 84 42.9
CANSAT56G1550 Cannabis sativa HOM05D001567 ORTHO05D001409 4.0e-08 61.2 84 42.9
Thecc.06G229600 Theobroma cacao HOM05D001567 ORTHO05D001409 9.0e-08 60.1 82 46.3
DCAR_002207 Daucus carota HOM05D001567 ORTHO05D001409 1.2e-07 59.7 87 44.8
Sabra04G0001700 Salix brachista HOM05D001567 ORTHO05D001409 1.5e-07 59.3 67 47.8
Eucgr.E03980 Eucalyptus grandis HOM05D001567 ORTHO05D001409 2.0e-07 58.9 57 50.9
Potri.004G003101 Populus trichocarpa HOM05D001567 ORTHO05D001409 2.0e-07 58.9 86 41.9
Lalb_Chr18g0056821 Lupinus albus HOM05D001567 ORTHO05D001409 2.6e-07 58.5 83 39.8
Migut.M01364 Erythranthe guttata HOM05D001567 ORTHO05D001409 4.5e-07 57.8 88 42.0
vmacro03659 Vaccinium macrocarpon HOM05D001567 ORTHO05D001409 4.5e-07 57.8 74 43.2
Cpa.g.c45104 Carica papaya HOM05D001567 ORTHO05D001409 5.8e-07 57.4 90 41.1
Lsat_1_v5_gn_7_14220 Lactuca sativa HOM05D001567 ORTHO05D001409 9.9e-07 56.6 88 43.2
Nitab4.5_0000091g0430 Nicotiana tabacum HOM05D001567 ORTHO05D001409 1.3e-06 56.2 83 42.2
Nitab4.5_0009515g0010 Nicotiana tabacum HOM05D001567 ORTHO05D001409 1.3e-06 56.2 83 42.2
TAR626G0005 Trochodendron aralioides HOM05D001567 ORTHO05D001409 2.2e-06 55.5 82 40.2
Lsat_1_v5_gn_4_63001 Lactuca sativa HOM05D001567 ORTHO05D001409 2.9e-06 55.1 74 47.3
Gohir.A06G152000 Gossypium hirsutum HOM05D001567 ORTHO05D001409 6.4e-06 53.9 42 50.0
Lj4g0027518 Lotus japonicus HOM05D001567 ORTHO05D001409 6.4e-06 53.9 76 40.8
Oeu051873.1 Olea europaea HOM05D000787 ORTHO05D001409 8.4e-06 53.5 44 56.8
Oeu051875.1 Olea europaea HOM05D000787 ORTHO05D001409 8.4e-06 53.5 44 56.8
Oeu051876.1 Olea europaea HOM05D001567 ORTHO05D001409 8.4e-06 53.5 44 56.8
Peaxi162Scf01096g00011 Petunia axillaris HOM05D001567 ORTHO05D001409 8.4e-06 53.5 85 41.2


User provided reference genes

Program Settings