Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C949T7 Lonicera japonica HOM05D000876 ORTHO05D000285 6.6e-51 203.8 103 100.0
Dinv34430 Davidia involucrata HOM05D000876 ORTHO05D000285 3.1e-32 141.7 100 73.0
Actinidia33947 Actinidia chinensis HOM05D000876 ORTHO05D000285 9.9e-31 136.7 102 67.6
CSS0005241 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 9.9e-31 136.7 95 71.6
CSS0003136 Camellia sinensis var. sinensis HOM05D000876 ORTHO05D000285 2.9e-30 135.2 95 70.5
Haze_17175 Corylus avellana HOM05D006228 ORTHO05D007847 6.6e-27 124.0 98 63.3
GSVIVG01016378001 Vitis vinifera HOM05D000876 ORTHO05D000285 8.6e-27 123.6 92 70.7
Rhsim03G0139500 Rhododendron simsii HOM05D000876 ORTHO05D000285 1.5e-26 122.9 97 63.9
Hma1.2p1_0710F.1_g207390 Hydrangea macrophylla HOM05D000876 ORTHO05D000285 1.8e-24 115.9 95 64.2
Oeu051245.1 Olea europaea HOM05D000876 ORTHO05D000285 2.4e-24 115.5 94 62.8
Oeu032678.2 Olea europaea HOM05D000876 ORTHO05D000285 6.8e-24 114.0 94 62.8
Eucgr.G03024 Eucalyptus grandis HOM05D000876 ORTHO05D000285 1.5e-23 112.8 98 62.2
CiPaw.02G189400 Carya illinoinensis HOM05D000876 ORTHO05D000285 9.9e-23 110.2 98 58.2
Atru.chr12.253 Acer truncatum HOM05D000876 ORTHO05D000285 2.2e-22 109.0 86 67.4
Ciclev10031384m.g Citrus clementina HOM05D000876 ORTHO05D000285 2.9e-22 108.6 86 67.4
QL08p062543 Quercus lobata HOM05D000020 ORTHO05D007189 2.9e-22 108.6 99 57.6
Migut.F01438 Erythranthe guttata HOM05D000876 ORTHO05D000285 3.8e-22 108.2 87 69.0
Prupe.2G245300 Prunus persica HOM05D000876 ORTHO05D000285 1.9e-21 105.9 84 69.0
VMungo1383G2642 Vigna mungo HOM05D000665 ORTHO05D000285 1.9e-21 105.9 95 57.9
MD01G1146000 Malus domestica HOM05D000876 ORTHO05D000285 3.2e-21 105.1 66 77.3
Ca_14593_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000285 4.2e-21 104.8 92 60.9
THA.LOC104816562 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 4.2e-21 104.8 90 61.1
Glyma.11G226600 Glycine max HOM05D000665 ORTHO05D000285 5.4e-21 104.4 95 56.8
Glyma.18G030600 Glycine max HOM05D000665 ORTHO05D000285 7.1e-21 104.0 95 55.8
RcHm_v2.0_Chr1g0369261 Rosa chinensis HOM05D000876 ORTHO05D000285 1.2e-20 103.2 65 76.9
TPR.G29813 Trifolium pratense HOM05D004575 ORTHO05D005774 2.1e-20 102.4 92 59.8
Medtr3g070080 Medicago truncatula HOM05D000665 ORTHO05D000285 2.7e-20 102.1 84 61.9
THA.LOC104823140 Tarenaya hassleriana HOM05D000876 ORTHO05D000285 2.7e-20 102.1 88 60.2
Carub.0006s0470 Capsella rubella HOM05D000876 ORTHO05D000285 3.5e-20 101.7 95 60.0
Lalb_Chr20g0116631 Lupinus albus HOM05D000876 ORTHO05D000285 3.5e-20 101.7 89 58.4
FvH4_7g23930 Fragaria vesca HOM05D000876 ORTHO05D000285 1.0e-19 100.1 65 75.4
FAN01G0349 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-19 100.1 65 75.4
FAN06G2005 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-19 100.1 65 75.4
FAN10G0150 Fragaria x ananassa HOM05D000876 ORTHO05D000285 1.0e-19 100.1 65 75.4
Cpa.g.sc19.224 Carica papaya HOM05D000876 ORTHO05D000285 1.3e-19 99.8 89 61.8
Psat5g127400 Pisum sativum HOM05D000665 ORTHO05D000285 1.3e-19 99.8 92 57.6
Lj6g0013767 Lotus japonicus HOM05D000876 ORTHO05D000285 5.1e-19 97.8 84 61.9
Phvul.001G240000 Phaseolus vulgaris HOM05D000665 ORTHO05D000285 6.6e-19 97.4 91 54.9
AT5G05800 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 1.5e-18 96.3 84 60.7
AL6G15700 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 2.5e-18 95.5 80 62.5
Aa31LG11G6810 Aethionema arabicum HOM05D000876 ORTHO05D000285 5.6e-18 94.4 79 60.8
BcaC09g48165 Brassica carinata HOM05D000876 ORTHO05D000285 4.8e-17 91.3 84 53.6
BolC1t05323H Brassica oleracea HOM05D000876 ORTHO05D000285 4.8e-17 91.3 84 53.6
Thhalv10015821m.g Eutrema salsugineum HOM05D000876 ORTHO05D000285 4.8e-17 91.3 80 60.0
BraA10t45098Z Brassica rapa HOM05D000876 ORTHO05D000285 6.2e-17 90.9 80 60.0
C09p71030 Brassica napus HOM05D000876 ORTHO05D000285 1.4e-16 89.7 80 58.8
BolC9t59867H Brassica oleracea HOM05D000876 ORTHO05D000285 1.4e-16 89.7 80 58.8
BcaB04g21141 Brassica carinata HOM05D000095 ORTHO05D000285 3.1e-16 88.6 83 54.2
A10p30570 Brassica napus HOM05D000876 ORTHO05D000285 3.1e-16 88.6 79 59.5
BraA01t04190Z Brassica rapa HOM05D000876 ORTHO05D000285 3.1e-16 88.6 83 53.0
BcaC06g32288 Brassica carinata HOM05D000876 ORTHO05D000285 4.0e-16 88.2 80 57.5
BcaNung06184 Brassica carinata HOM05D000876 ORTHO05D000285 4.0e-16 88.2 80 57.5
CARHR207460 Cardamine hirsuta HOM05D000876 ORTHO05D000285 4.0e-16 88.2 60 71.7
AT3G11290 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 5.3e-16 87.8 65 64.6
Sp3g09570 Schrenkiella parvula HOM05D000876 ORTHO05D000285 6.9e-16 87.4 84 53.6
Sp6g37100 Schrenkiella parvula HOM05D000876 ORTHO05D000285 1.2e-15 86.7 78 59.0
Aa31LG3G4690 Aethionema arabicum HOM05D000876 ORTHO05D000285 2.6e-15 85.5 59 67.8
AL3G22820 Arabidopsis lyrata HOM05D000876 ORTHO05D000285 7.6e-15 84.0 65 63.1
Carub.0003s1061 Capsella rubella HOM05D000876 ORTHO05D000285 9.9e-15 83.6 68 58.8
CARHR085850 Cardamine hirsuta HOM05D000876 ORTHO05D000285 1.3e-14 83.2 72 58.3
Carub.0003s3346 Capsella rubella HOM05D000876 ORTHO05D000285 1.0e-11 73.6 88 45.5
Carub.0003s1062 Capsella rubella HOM05D000876 ORTHO05D000285 6.6e-11 70.9 60 51.7
AT2G19220 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 1.9e-10 69.3 87 43.7
Actinidia29672 Actinidia chinensis HOM05D000020 ORTHO05D007189 4.3e-10 68.2 70 52.9
AT3G11310 Arabidopsis thaliana HOM05D000876 ORTHO05D000285 2.8e-09 65.5 59 49.2
CANSAT11G0869 Cannabis sativa HOM05D000876 ORTHO05D000285 5.8e-07 57.8 74 40.5
CANSAT21G1745 Cannabis sativa HOM05D000876 ORTHO05D000285 5.8e-07 57.8 74 40.5
CANSAT25G2261 Cannabis sativa HOM05D000876 ORTHO05D000285 5.8e-07 57.8 74 40.5
CANSAT64G0985 Cannabis sativa HOM05D000876 ORTHO05D000285 5.8e-07 57.8 74 40.5
Hund08047 Selenicereus undatus HOM05D000876 ORTHO05D002662 5.8e-07 57.8 64 43.8
Ciclev10013387m.g Citrus clementina HOM05D000876 ORTHO05D034797 7.6e-07 57.4 72 45.8
Aqoxy4G02707 Aquilegia oxysepala HOM05D000876 ORTHO05D000285 1.3e-06 56.6 76 43.4
CANSAT11G0810 Cannabis sativa HOM05D000876 ORTHO05D000285 1.7e-06 56.2 74 39.2
CANSAT21G2246 Cannabis sativa HOM05D000876 ORTHO05D000285 2.9e-06 55.5 74 39.2
Hund08681 Selenicereus undatus HOM05D000876 ORTHO05D000285 3.8e-06 55.1 52 46.2
TPR.G10520 Trifolium pratense HOM05D000665 ORTHO05D003147 4.9e-06 54.7 78 44.9
CANSAT78G0895 Cannabis sativa HOM05D000876 ORTHO05D000285 6.4e-06 54.3 74 37.8
Hund23719 Selenicereus undatus HOM05D000876 ORTHO05D000285 6.4e-06 54.3 92 37.0
Hund14971 Selenicereus undatus HOM05D000876 ORTHO05D000285 8.4e-06 53.9 52 44.2


User provided reference genes

Program Settings