Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.1e-161 573.2 283 100.0
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 2.1e-115 419.5 279 76.0
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 6.1e-115 417.9 291 71.1
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 1.4e-114 416.8 277 74.7
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 3.0e-114 415.6 283 74.6
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 8.8e-114 414.1 277 74.0
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 4.4e-113 411.8 279 73.8
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 5.7e-113 411.4 279 73.5
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 7.4e-113 411.0 279 73.8
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 7.4e-113 411.0 280 73.6
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 1.7e-112 409.8 296 70.3
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 2.8e-112 409.1 293 70.6
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 8.2e-112 407.5 279 73.5
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 1.1e-111 407.1 288 70.5
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 3.1e-111 405.6 281 70.5
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 4.1e-111 405.2 283 71.7
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 5.3e-111 404.8 283 72.1
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 7.0e-111 404.4 291 69.4
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 1.6e-110 403.3 296 69.3
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 5.9e-110 401.4 279 72.8
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 1.7e-109 399.8 285 70.5
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 3.8e-109 398.7 291 69.4
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 6.5e-109 397.9 281 71.9
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 8.5e-109 397.5 279 71.7
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 1.5e-108 396.7 284 69.7
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 2.5e-108 396.0 285 69.5
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 7.2e-108 394.4 283 69.3
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 7.2e-108 394.4 291 69.8
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 2.7e-107 392.5 279 70.6
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 3.6e-107 392.1 283 72.8
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 3.6e-107 392.1 280 71.8
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 3.6e-107 392.1 286 68.9
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 6.1e-107 391.3 224 81.7
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 1.0e-106 390.6 279 69.5
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 1.0e-106 390.6 279 69.5
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 1.4e-106 390.2 285 67.7
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.8e-106 389.8 285 70.5
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.0e-106 388.7 227 79.3
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.2e-105 387.1 244 75.0
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.2e-105 387.1 280 69.6
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 1.2e-105 387.1 281 69.0
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 1.5e-105 386.7 277 70.4
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.0e-105 386.3 223 82.5
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 2.6e-105 386.0 228 78.9
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.6e-105 386.0 288 67.4
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 5.7e-105 384.8 277 71.1
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 7.5e-105 384.4 276 69.2
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 7.5e-105 384.4 281 67.6
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 3.7e-104 382.1 278 68.0
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 4.8e-104 381.7 241 76.3
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 1.8e-103 379.8 277 67.9
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.8e-103 379.8 238 77.3
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 4.1e-103 378.6 286 67.1
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 7.0e-103 377.9 292 65.8
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 9.1e-103 377.5 280 67.1
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 1.2e-102 377.1 287 66.9
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 1.2e-102 377.1 284 65.1
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 1.6e-102 376.7 253 72.3
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 2.7e-102 375.9 292 64.4
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 3.5e-102 375.6 284 65.5
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 4.5e-102 375.2 284 66.2
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 5.9e-102 374.8 289 66.8
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 5.9e-102 374.8 280 67.5
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 7.7e-102 374.4 288 67.0
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 1.0e-101 374.0 234 76.9
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 1.3e-101 373.6 235 75.7
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.2e-101 372.9 222 78.8
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 3.8e-101 372.1 271 66.4
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.5e-100 370.2 253 70.4
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 1.5e-100 370.2 289 65.4
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 1.9e-100 369.8 234 76.9
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 3.2e-100 369.0 263 68.8
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 9.4e-100 367.5 235 73.2
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.2e-99 367.1 222 76.6
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.1e-99 366.3 280 67.1
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.1e-99 366.3 243 72.8
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.7e-99 365.9 280 67.1
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.7e-99 365.2 286 67.5
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 6.1e-99 364.8 283 63.6
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 8.0e-99 364.4 285 64.6
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 4.0e-98 362.1 221 77.4
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 5.2e-98 361.7 283 63.6
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 1.2e-97 360.5 284 63.7
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 4.8e-96 355.1 278 63.7
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 1.4e-95 353.6 278 66.5
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 1.4e-95 353.6 278 64.0
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 7.0e-95 351.3 278 65.5
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 2.7e-94 349.4 284 60.9
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.3e-93 347.1 283 62.2
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 3.3e-92 342.4 222 74.3
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 4.2e-92 342.0 224 75.4
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 4.2e-92 342.0 278 63.3
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 2.1e-91 339.7 260 66.9
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.0e-90 337.4 307 56.7
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 5.2e-90 335.1 236 69.9
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 6.8e-90 334.7 289 60.9
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 7.0e-87 324.7 276 59.8
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 2.7e-86 322.8 227 67.4
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.0e-85 320.9 269 60.6
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 6.6e-85 318.2 274 59.9
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 1.1e-84 317.4 290 57.9
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 3.6e-83 312.4 226 64.6
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 6.8e-82 308.1 239 68.2
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 9.8e-81 304.3 235 64.7
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 1.3e-80 303.9 233 61.4
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 1.1e-79 300.8 285 56.5
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.4e-79 300.4 234 64.5
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 4.1e-79 298.9 285 56.1
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 5.0e-77 292.0 174 79.9
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 1.9e-76 290.0 282 55.3
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.6e-75 287.0 173 79.8
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 8.0e-75 284.6 269 56.9
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 3.4e-73 279.3 165 78.8
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 9.8e-73 277.7 167 79.0
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 4.1e-71 272.3 216 60.2
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.2e-70 270.8 166 74.1
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 2.6e-65 253.1 164 73.2
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 1.1e-58 231.1 191 67.0
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 1.4e-58 230.7 213 56.8
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 1.1e-55 221.1 197 60.4
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 1.9e-55 220.3 153 66.7
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 2.9e-48 196.4 145 64.1
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.9e-47 193.7 299 39.8
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 5.4e-47 192.2 152 60.5
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 7.8e-46 188.3 170 60.0
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 8.7e-45 184.9 198 57.6
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 3.3e-44 183.0 205 47.3
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 5.6e-44 182.2 133 66.2
Solyc04g025230.1 Solanum lycopersicum HOM05D002510 ORTHO05D006928 2.3e-29 133.7 91 68.1
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 8.7e-29 131.7 131 55.7
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.7e-22 110.2 90 57.8
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 1.0e-21 108.2 144 47.2
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.9e-20 104.0 128 46.9
Actinidia32448 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.1e-18 96.3 71 64.8
Cre16.g662650 Chlamydomonas reinhardtii HOM05D002510 ORTHO05D006928 1.5e-12 77.8 124 35.5
PRCOL_00005349 Prasinoderma coloniale HOM05D002510 ORTHO05D006928 2.8e-11 73.6 77 49.4
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.2e-09 68.2 67 55.2
MCO13G231 Micromonas commoda HOM05D005733 ORTHO05D006928 1.3e-08 64.7 84 38.1
A03p21800 Brassica napus HOM05D002510 ORTHO05D006928 4.2e-07 59.7 41 58.5
PRCOL_00000814 Prasinoderma coloniale HOM05D005733 ORTHO05D006928 3.6e-06 56.6 90 40.0


User provided reference genes

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