Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C841T8 Lonicera japonica HOM05D006845 ORTHO05D009300 7.8e-236 820.1 396 100.0
Hma1.2p1_0898F.1_g234490 Hydrangea macrophylla HOM05D006845 ORTHO05D009300 3.0e-163 578.9 371 74.7
Peaxi162Scf00000g00345 Petunia axillaris HOM05D006845 ORTHO05D009300 1.5e-162 576.6 354 76.6
Nitab4.5_0003378g0090 Nicotiana tabacum HOM05D006845 ORTHO05D009300 5.3e-160 568.2 351 74.6
Dinv14926 Davidia involucrata HOM05D006845 ORTHO05D009300 6.9e-160 567.8 371 73.0
Thecc.07G091800 Theobroma cacao HOM05D006845 ORTHO05D009300 9.1e-160 567.4 371 72.8
QL08p022228 Quercus lobata HOM05D006845 ORTHO05D009300 1.0e-158 563.9 384 70.1
GSVIVG01014313001 Vitis vinifera HOM05D006845 ORTHO05D009300 2.2e-158 562.8 371 72.0
Migut.H01945 Erythranthe guttata HOM05D006845 ORTHO05D009300 5.0e-158 561.6 374 69.5
CiPaw.11G170600 Carya illinoinensis HOM05D006845 ORTHO05D009300 6.5e-158 561.2 388 69.8
Prupe.4G179900 Prunus persica HOM05D006845 ORTHO05D009300 1.9e-157 559.7 387 69.0
Atru.chr2.2481 Acer truncatum HOM05D006845 ORTHO05D009300 2.5e-157 559.3 384 69.8
Gohir.D08G031900 Gossypium hirsutum HOM05D006845 ORTHO05D009300 6.1e-156 554.7 371 70.1
Gorai.004G029400 Gossypium raimondii HOM05D006845 ORTHO05D009300 1.0e-155 553.9 371 69.8
Manes.15G087900 Manihot esculenta HOM05D006845 ORTHO05D009300 1.0e-155 553.9 371 71.2
Gohir.A08G021200 Gossypium hirsutum HOM05D006845 ORTHO05D009300 1.8e-155 553.1 371 69.8
CSS0022560 Camellia sinensis var. sinensis HOM05D006845 ORTHO05D009300 3.0e-155 552.4 371 70.6
Actinidia18770 Actinidia chinensis HOM05D006845 ORTHO05D009300 6.7e-155 551.2 374 69.5
MD11G1250000 Malus domestica HOM05D006845 ORTHO05D009300 6.7e-155 551.2 387 66.9
HanXRQChr12g0364151 Helianthus annuus HOM05D006845 ORTHO05D009300 1.5e-154 550.1 387 67.4
Potri.001G398900 Populus trichocarpa HOM05D006845 ORTHO05D009300 1.5e-154 550.1 384 67.4
PGR083G0376 Punica granatum HOM05D006845 ORTHO05D009300 2.0e-154 549.7 374 69.5
Sopen12g007210 Solanum pennellii HOM05D006845 ORTHO05D009300 2.6e-154 549.3 371 70.6
COL.COLO4_27185 Corchorus olitorius HOM05D006845 ORTHO05D009300 3.3e-154 548.9 410 64.9
Solyc12g013890.2 Solanum lycopersicum HOM05D006845 ORTHO05D009300 3.3e-154 548.9 371 70.4
Duzib213G0603 Durio zibethinus HOM05D006845 ORTHO05D009300 4.4e-154 548.5 374 69.3
MSTRG.14352 Avicennia marina HOM05D006845 ORTHO05D009300 9.7e-154 547.4 384 68.0
arahy.Tifrunner.gnm1.ann1.61G52X Arachis hypogaea HOM05D006845 ORTHO05D009300 1.3e-153 547.0 389 66.1
SGA_v2.0_scaffold70G23678 Striga asiatica HOM05D006845 ORTHO05D009300 1.3e-153 547.0 378 67.2
arahy.Tifrunner.gnm1.ann1.ME6152 Arachis hypogaea HOM05D006845 ORTHO05D009300 2.2e-153 546.2 389 65.8
Cfa020572 Carpinus fangiana HOM05D006845 ORTHO05D009300 3.7e-153 545.4 370 70.8
DCAR_017135 Daucus carota HOM05D006845 ORTHO05D009300 3.7e-153 545.4 374 67.6
Nn1g06500 Nelumbo nucifera HOM05D006845 ORTHO05D009300 3.7e-153 545.4 384 67.2
Potri.011G118000 Populus trichocarpa HOM05D006845 ORTHO05D009300 3.7e-153 545.4 387 65.9
Eucgr.F01150 Eucalyptus grandis HOM05D006845 ORTHO05D009300 1.8e-152 543.1 371 69.8
CAN.G213.11 Capsicum annuum HOM05D006845 ORTHO05D009300 3.1e-152 542.3 373 70.0
TAR627G0110 Trochodendron aralioides HOM05D006845 ORTHO05D009300 3.1e-152 542.3 371 67.4
ClCG11G018010 Citrullus lanatus HOM05D006845 ORTHO05D009300 4.1e-152 542.0 387 66.4
Ciclev10008389m.g Citrus clementina HOM05D006845 ORTHO05D009300 4.1e-152 542.0 374 69.0
MELO3C016692.2 Cucumis melo HOM05D006845 ORTHO05D009300 4.1e-152 542.0 387 66.4
Lalb_Chr25g0286311 Lupinus albus HOM05D006845 ORTHO05D009300 1.2e-151 540.4 374 68.2
CsaV3_4G033630 Cucumis sativus L. HOM05D006845 ORTHO05D009300 2.6e-151 539.3 387 66.1
Lsat_1_v5_gn_9_97520 Lactuca sativa HOM05D006845 ORTHO05D009300 2.6e-151 539.3 386 67.1
AUR62039192 Chenopodium quinoa HOM05D006845 ORTHO05D009300 4.5e-151 538.5 374 66.3
MD03G1229200 Malus domestica HOM05D006845 ORTHO05D009300 1.0e-150 537.3 388 66.0
AUR62019438 Chenopodium quinoa HOM05D006845 ORTHO05D009300 2.2e-150 536.2 374 65.8
CANSAT56G3540 Cannabis sativa HOM05D006845 ORTHO05D009300 6.5e-150 534.6 386 65.0
EL10Ac4g08199 Beta vulgaris HOM05D006845 ORTHO05D009300 1.1e-149 533.9 374 66.0
Thhalv10013651m.g Eutrema salsugineum HOM05D006845 ORTHO05D009300 1.5e-149 533.5 371 67.7
RcHm_v2.0_Chr5g0033181 Rosa chinensis HOM05D006845 ORTHO05D009300 1.5e-149 533.5 387 65.4
Sed0008037 Sechium edule HOM05D006845 ORTHO05D009300 5.5e-149 531.6 371 68.7
PSO675G5588 Papaver somniferum HOM05D006845 ORTHO05D009300 7.2e-149 531.2 371 66.0
FvH4_3g19780 Fragaria vesca HOM05D006845 ORTHO05D009300 1.6e-148 530.0 371 66.8
PSO541G3085 Papaver somniferum HOM05D006845 ORTHO05D009300 2.1e-148 529.6 371 66.0
Lj3g0006633 Lotus japonicus HOM05D006845 ORTHO05D009300 6.1e-148 528.1 389 65.6
Aqoxy1G02380 Aquilegia oxysepala HOM05D006845 ORTHO05D009300 8.0e-148 527.7 371 66.6
AL8G28920 Arabidopsis lyrata HOM05D006845 ORTHO05D009300 1.4e-147 526.9 371 66.8
Oeu051072.2 Olea europaea HOM05D006845 ORTHO05D009300 1.4e-147 526.9 409 63.3
ATR0737G060 Amborella trichopoda HOM05D006845 ORTHO05D009300 2.3e-147 526.2 390 64.4
Glyma.12G225400 Glycine max HOM05D006845 ORTHO05D009300 3.0e-147 525.8 390 64.9
Glyma.13G275900 Glycine max HOM05D006845 ORTHO05D009300 6.7e-147 524.6 390 64.9
AT5G53860 Arabidopsis thaliana HOM05D006845 ORTHO05D009300 1.5e-146 523.5 371 66.3
FAN11G1119 Fragaria x ananassa HOM05D006845 ORTHO05D009300 2.0e-146 523.1 376 66.0
A10p11250 Brassica napus HOM05D006845 ORTHO05D009300 1.7e-145 520.0 371 66.0
C09p43870 Brassica napus HOM05D006845 ORTHO05D009300 2.2e-145 519.6 371 66.0
Sp6g15920 Schrenkiella parvula HOM05D006845 ORTHO05D009300 1.1e-144 517.3 371 65.8
BcaB08g35745 Brassica carinata HOM05D006845 ORTHO05D009300 1.4e-144 516.9 371 65.8
Carub.0008s1415 Capsella rubella HOM05D006845 ORTHO05D009300 1.4e-144 516.9 371 65.0
CARHR266990 Cardamine hirsuta HOM05D006845 ORTHO05D009300 1.8e-144 516.5 371 65.5
FAN21G2917 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.8e-144 516.5 389 63.5
BcaC04g20411 Brassica carinata HOM05D006845 ORTHO05D009300 2.4e-144 516.2 371 65.8
CDE02G1035 Ceratophyllum demersum HOM05D006845 ORTHO05D009300 2.4e-144 516.2 384 61.7
TWI39G1089 Tripterygium wilfordii HOM05D006845 ORTHO05D009300 2.0e-143 513.1 371 65.8
VMungo1080G1688 Vigna mungo HOM05D006845 ORTHO05D009300 3.5e-143 512.3 390 63.8
Aa31LG3G10070 Aethionema arabicum HOM05D006845 ORTHO05D009300 1.0e-142 510.8 371 64.7
Phvul.005G073100 Phaseolus vulgaris HOM05D006845 ORTHO05D009300 3.6e-140 502.3 390 62.6
THA.LOC104811867 Tarenaya hassleriana HOM05D006845 ORTHO05D009300 3.0e-139 499.2 371 63.6
Ca_03508_v3 Cicer arietinum L. HOM05D006845 ORTHO05D009300 6.8e-139 498.0 389 62.7
FAN25G1923 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.2e-138 497.3 352 66.5
FAN16G0640 Fragaria x ananassa HOM05D006845 ORTHO05D009300 1.3e-137 493.8 357 66.1
Psat5g242160 Pisum sativum HOM05D006845 ORTHO05D009300 2.8e-137 492.7 392 62.0
Sabra16G0261500 Salix brachista HOM05D006845 ORTHO05D009300 1.8e-136 490.0 512 50.2
BolC9t57269H Brassica oleracea HOM05D006845 ORTHO05D009300 6.1e-132 474.9 388 60.1
HPP92_003615 Vanilla planifolia HOM05D006845 ORTHO05D009300 8.0e-132 474.6 386 56.5
Ah.06g184430 Amaranthus hybridus HOM05D006845 ORTHO05D009300 1.0e-131 474.2 374 62.8
TPR.G7949 Trifolium pratense HOM05D006845 ORTHO05D009300 6.8e-131 471.5 380 60.5
Nitab4.5_0000332g0060 Nicotiana tabacum HOM05D006845 ORTHO05D009300 2.6e-130 469.5 424 56.6
Medtr2g079060 Medicago truncatula HOM05D006845 ORTHO05D009300 4.5e-127 458.8 395 59.0
BraA10t43218Z Brassica rapa HOM05D006845 ORTHO05D009300 8.6e-126 454.5 416 55.5
Actinidia35244 Actinidia chinensis HOM05D006845 ORTHO05D009300 8.0e-124 448.0 411 57.7
ECA240G2176 Erigeron canadensis HOM05D006845 ORTHO05D009300 3.7e-121 439.1 295 70.2
Sc16g0007040 Simmondsia chinensis HOM05D006845 ORTHO05D009300 6.6e-118 428.3 295 68.5
Haze_09439 Corylus avellana HOM05D006845 ORTHO05D009300 3.6e-116 422.5 357 59.7
Cpa.g.sc80.77 Carica papaya HOM05D006845 ORTHO05D009300 2.1e-95 353.6 364 52.2
SEGI_13558 Sequoiadendron giganteum HOM05D006845 ORTHO05D009300 9.0e-83 311.6 335 43.9
Cc05_g11920 Coffea canephora HOM05D006845 ORTHO05D009300 7.6e-82 308.5 188 74.5
AagrBONN_evm.TU.Sc2ySwM_344.572 Anthoceros agrestis HOM05D006845 ORTHO05D009300 1.6e-76 290.8 344 40.4
BcaB07g33336 Brassica carinata HOM05D006845 ORTHO05D009300 9.0e-75 285.0 179 72.6
Pp3c1_32740 Physcomitrium patens HOM05D006845 ORTHO05D009300 4.2e-72 276.2 344 41.6
Mapoly0037s0133 Marchantia polymorpha HOM05D006845 ORTHO05D009300 5.8e-66 255.8 334 37.7
Cc05_g11930 Coffea canephora HOM05D006845 ORTHO05D009300 7.1e-64 248.8 161 70.2
SMO143G0137 Selaginella moellendorffii HOM05D006845 ORTHO05D009300 8.7e-62 241.9 260 43.5
unitig_899.g15568 Utricularia gibba HOM05D006845 ORTHO05D009300 8.2e-44 182.2 106 76.4
Lsat_1_v5_gn_7_87221 Lactuca sativa HOM05D003066 ORTHO05D004162 3.1e-35 153.7 98 70.4
Lsat_1_v5_gn_4_31781 Lactuca sativa HOM05D006845 ORTHO05D014206 3.5e-34 150.2 109 67.0
Lsat_1_v5_gn_5_134240 Lactuca sativa HOM05D006845 ORTHO05D014206 3.5e-34 150.2 109 67.0
Lsat_1_v5_gn_7_62660 Lactuca sativa HOM05D006845 ORTHO05D014206 7.7e-34 149.1 98 70.4
BcaB04g16942 Brassica carinata HOM05D006845 ORTHO05D009300 8.2e-28 129.0 139 52.5
Sabra11G0103000 Salix brachista HOM05D006845 ORTHO05D009300 2.3e-22 110.9 64 75.0
Hma1.2p1_0554F.1_g177810 Hydrangea macrophylla HOM05D006845 ORTHO05D014206 1.4e-11 75.1 86 48.8
FAN12G2298 Fragaria x ananassa HOM05D006845 ORTHO05D014206 7.0e-11 72.8 48 62.5
FAN05G4902 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.7e-10 70.9 50 58.0
FAN25G3098 Fragaria x ananassa HOM05D006845 ORTHO05D014206 4.5e-10 70.1 48 60.4
FAN09G2373 Fragaria x ananassa HOM05D006845 ORTHO05D014206 2.5e-08 64.3 48 56.2
MBI02_g32976_MAGBIO Magnolia biondii HOM05D000872 ORTHO05D014206 3.3e-08 63.9 63 49.2


User provided reference genes

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