Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C830T3 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-114 415.2 208 100.0
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-58 230.7 165 73.9
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-58 228.0 207 60.4
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-51 206.5 343 41.4
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-51 206.5 235 53.2
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-51 204.9 235 52.8
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-45 186.4 240 46.2
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-45 186.0 233 50.2
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-41 171.0 204 53.4
Lj1C592T6 Lonicera japonica HOM05D000176 ORTHO05D000106 5.8e-38 161.8 212 51.4
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-37 159.8 222 43.7
Lj2C1126T20 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-36 157.1 164 57.9
Lju1163C0T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-36 157.1 202 49.0
Lju41C46T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-34 149.8 164 53.0
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 1.1e-33 147.5 186 43.0
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-32 143.7 175 43.4
Lju1295A4T34 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-32 141.7 217 47.0
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-31 138.7 277 33.6
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-29 134.0 281 32.7
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-28 130.2 162 45.1
Lj7C461T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-28 129.4 252 40.9
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-25 120.2 93 59.1
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-25 119.0 101 53.5
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-24 117.1 101 53.5
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-24 115.5 194 35.6
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-24 114.8 124 49.2
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-23 114.4 224 33.9
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-23 114.0 126 42.9
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-23 113.6 104 49.0
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-23 112.8 147 40.8
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-23 112.8 200 32.5
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-23 112.5 220 33.6
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-23 111.7 144 42.4
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-23 111.3 104 48.1
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-22 107.8 116 41.4
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-21 107.1 100 50.0
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-21 107.1 173 38.7
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-21 106.3 104 47.1
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-21 105.9 102 51.0
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-21 104.8 100 48.0
Lj6C620T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-20 102.4 72 75.0
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-20 102.4 100 48.0
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-20 102.1 91 50.5
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-19 100.9 92 47.8
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 3.5e-19 99.4 100 48.0
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-19 99.4 100 48.0
Lju158C6T6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-19 99.0 87 54.0
Lj4A163G72 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-19 98.6 87 52.9
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 7.8e-19 98.2 100 47.0
Lj7C277T0 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-18 97.8 202 37.6
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-18 97.1 106 43.4
Lj4A456T44 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-18 96.3 63 65.1
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-18 95.1 92 46.7
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-17 94.4 87 50.6
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-17 94.0 92 48.9
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 1.9e-17 93.6 85 47.1
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-17 92.8 77 55.8
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-17 92.4 104 43.3
Lj8C33G11 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-17 91.3 78 66.7
Lju188C3T12 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-17 91.3 99 45.5
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-16 90.9 80 50.0
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-16 90.9 83 61.4
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-16 90.5 143 39.2
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-16 89.7 100 44.0
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-16 88.2 94 46.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-16 88.2 76 50.0
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-15 87.8 100 44.0
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-15 86.3 97 41.2
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 5.3e-15 85.5 100 46.0
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-15 85.1 92 41.3
Lj4P686T45 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-15 85.1 83 57.8
Lj6P836T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-14 82.8 65 64.6
Lj8A112T24 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-14 82.8 99 43.4
Lj2A419T34 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-13 80.9 59 71.2
Lj4C435T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 79.7 171 31.6
Lj7C274G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-13 79.7 44 77.3
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-12 77.8 56 57.1
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-12 76.6 100 41.0
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.2e-11 74.3 111 36.9
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-11 73.9 69 53.6
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.1e-11 73.6 111 36.0
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 3.5e-11 72.8 65 47.7
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 4.6e-11 72.4 65 47.7
Lj3A875G59 Lonicera japonica HOM05D000176 ORTHO05D000106 7.9e-11 71.6 55 54.5
Lj3A910T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-10 71.2 149 33.6
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 2.3e-10 70.1 65 47.7
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 3.0e-10 69.7 82 42.7
Aqoxy6G02234 Aquilegia oxysepala HOM05D000176 ORTHO05D011435 6.7e-10 68.6 87 42.5
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.7e-10 68.6 66 48.5
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 6.7e-10 68.6 66 48.5
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.6 152 32.9
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-10 68.6 49 65.3
Lj7C702T2 Lonicera japonica HOM05D000176 ORTHO05D000106 8.7e-10 68.2 49 65.3
MD06G1202700 Malus domestica HOM05D000115 ORTHO05D003511 8.7e-10 68.2 64 46.9
Lj7P460T35 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-09 67.8 68 42.6
Aqoxy7G02369 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.5e-09 67.4 67 47.8
Aqoxy7G02373 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 1.5e-09 67.4 67 47.8
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.9e-09 67.0 82 41.5
Aqoxy2G01940 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 2.5e-09 66.6 69 42.0
Lj2C996G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-09 66.6 104 35.6
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 3.3e-09 66.2 74 39.2
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-09 65.5 50 54.0
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 9.6e-09 64.7 69 46.4
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-08 64.3 46 54.3
Lj7A594T54 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-08 63.5 147 32.7
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-08 62.4 170 31.8
Ca_23051_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 8.1e-08 61.6 76 44.7
Lj1C816T8 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-08 61.6 123 32.5
Migut.J01216 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.4e-07 60.8 82 39.0
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-07 60.8 87 39.1
Lj4P388T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-07 60.5 60 48.3
Lju124P4T4 Lonicera japonica HOM05D000176 ORTHO05D011435 2.4e-07 60.1 66 47.0
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-07 59.7 54 53.7
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-07 59.3 54 53.7
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 5.3e-07 58.9 100 36.0
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-07 58.5 54 53.7
Ca_23052_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.2e-06 57.8 76 42.1
Hma1.2p1_0622F.1_g190860 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.2e-06 57.8 61 45.9
Ca_07608_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002268 1.5e-06 57.4 76 42.1
Ca_13973_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 1.5e-06 57.4 76 42.1
Migut.C00132 Erythranthe guttata HOM05D000176 ORTHO05D000106 1.5e-06 57.4 62 45.2
Ca_00650_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 2.6e-06 56.6 76 42.1
PSO675G7301 Papaver somniferum HOM05D000176 ORTHO05D000106 2.6e-06 56.6 86 41.9
Ca_11967_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 3.4e-06 56.2 65 46.2
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-06 55.8 162 27.8
Ca_02615_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.8e-06 55.5 123 26.0
Ca_08449_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 5.8e-06 55.5 65 44.6
TWI73G0304 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 5.8e-06 55.5 61 39.3
Ca_12050_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.6e-06 55.1 106 36.8
Ca_14601_v3 Cicer arietinum L. HOM05D004283 ORTHO05D002183 7.6e-06 55.1 70 45.7
Aqoxy1G03413 Aquilegia oxysepala HOM05D025411 ORTHO05D000106 9.9e-06 54.7 100 35.0
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-06 54.7 31 71.0


User provided reference genes

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