Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C822G13 Lonicera japonica HOM05D005685 ORTHO05D007046 0.0e+00 1279.2 631 100.0
Dinv13349 Davidia involucrata HOM05D005685 ORTHO05D007046 4.1e-244 848.2 664 66.6
Hma1.2p1_0713F.1_g207810 Hydrangea macrophylla HOM05D005685 ORTHO05D007046 8.8e-231 803.9 672 61.9
Actinidia12613 Actinidia chinensis HOM05D005685 ORTHO05D007046 3.0e-223 778.9 665 60.3
RhsimUnG0060100 Rhododendron simsii HOM05D005685 ORTHO05D007046 7.5e-222 774.2 635 63.0
CSS0007667 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 1.6e-219 766.5 668 59.7
RhsimUnG0165000 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.2e-214 750.4 657 59.7
MSTRG.14992 Avicennia marina HOM05D005685 ORTHO05D007046 2.6e-206 722.6 668 57.2
DCAR_017584 Daucus carota HOM05D005685 ORTHO05D007046 7.0e-204 714.5 683 56.8
TAR605G0002 Trochodendron aralioides HOM05D005685 ORTHO05D007046 9.2e-204 714.1 673 56.8
Cc05_g10550 Coffea canephora HOM05D005685 ORTHO05D007046 4.5e-203 711.8 680 55.9
Haze_08449 Corylus avellana HOM05D005685 ORTHO05D007046 2.5e-201 706.1 679 54.6
vmacro11986 Vaccinium macrocarpon HOM05D005685 ORTHO05D007046 3.6e-200 702.2 585 63.1
RhsimUnG0224400 Rhododendron simsii HOM05D005685 ORTHO05D007046 4.0e-199 698.7 669 55.9
CiPaw.11G154400 Carya illinoinensis HOM05D005685 ORTHO05D007046 2.8e-192 676.0 664 53.6
SalBow8G2073 Salvia bowleyana HOM05D005685 ORTHO05D007046 2.3e-191 672.9 685 52.6
Sopen07g030310 Solanum pennellii HOM05D005685 ORTHO05D007046 1.2e-187 660.6 669 53.5
Lsat_1_v5_gn_5_126281 Lactuca sativa HOM05D005685 ORTHO05D007046 4.6e-187 658.7 660 53.8
Solyc07g062050.3 Solanum lycopersicum HOM05D005685 ORTHO05D007046 3.3e-185 652.5 669 52.9
GSVIVG01014072001 Vitis vinifera HOM05D005685 ORTHO05D007046 7.3e-185 651.4 659 53.6
CAN.G375.61 Capsicum annuum HOM05D005685 ORTHO05D007046 6.2e-184 648.3 666 53.2
COL.COLO4_17454 Corchorus olitorius HOM05D005685 ORTHO05D007046 8.1e-184 647.9 614 56.7
Ciclev10019120m.g Citrus clementina HOM05D005685 ORTHO05D007046 1.4e-183 647.1 661 52.3
Lalb_Chr19g0133681 Lupinus albus HOM05D005685 ORTHO05D007046 4.0e-183 645.6 668 51.5
Phvul.011G173500 Phaseolus vulgaris HOM05D005685 ORTHO05D007046 2.9e-181 639.4 668 50.4
Atru.chr2.1911 Acer truncatum HOM05D005685 ORTHO05D007046 6.4e-181 638.3 667 51.9
Peaxi162Scf00111g01236 Petunia axillaris HOM05D005685 ORTHO05D007046 6.4e-181 638.3 642 54.5
VMungo1127G1789 Vigna mungo HOM05D005685 ORTHO05D007046 8.3e-181 637.9 666 50.0
Cpa.g.sc77.65 Carica papaya HOM05D005685 ORTHO05D007046 1.4e-180 637.1 645 52.1
Lj1g0015970 Lotus japonicus HOM05D005685 ORTHO05D007046 7.1e-180 634.8 677 49.6
HanXRQChr10g0305611 Helianthus annuus HOM05D005685 ORTHO05D007046 9.2e-180 634.4 672 51.9
Prupe.4G154100 Prunus persica HOM05D005685 ORTHO05D007046 9.2e-180 634.4 661 51.0
Nn1g00647 Nelumbo nucifera HOM05D005685 ORTHO05D007046 2.7e-179 632.9 685 50.5
Sed0016294 Sechium edule HOM05D005685 ORTHO05D007046 1.0e-178 630.9 678 49.9
Gohir.A11G290000 Gossypium hirsutum HOM05D005685 ORTHO05D007046 8.6e-178 627.9 666 52.0
CsaV3_4G032730 Cucumis sativus L. HOM05D005685 ORTHO05D007046 3.3e-177 625.9 678 50.4
Psat4g139160 Pisum sativum HOM05D005685 ORTHO05D007046 3.3e-177 625.9 669 49.3
Thecc.07G137700 Theobroma cacao HOM05D005685 ORTHO05D007046 1.2e-176 624.0 642 53.1
CANSAT56G0504 Cannabis sativa HOM05D005685 ORTHO05D007046 4.7e-176 622.1 676 50.1
Manes.03G084500 Manihot esculenta HOM05D005685 ORTHO05D007046 1.4e-175 620.5 633 52.1
PGSC0003DMG400007083 Solanum tuberosum HOM05D005685 ORTHO05D007046 1.8e-175 620.2 761 46.8
Medtr8g461480 Medicago truncatula HOM05D005685 ORTHO05D007046 1.2e-174 617.5 668 49.1
TPR.G16474 Trifolium pratense HOM05D005685 ORTHO05D007046 1.2e-174 617.5 666 49.5
Gohir.D11G302400 Gossypium hirsutum HOM05D005685 ORTHO05D007046 4.4e-174 615.5 666 51.5
MD11G1273300 Malus domestica HOM05D005685 ORTHO05D007046 9.9e-174 614.4 651 50.2
ClCG11G017070 Citrullus lanatus HOM05D005685 ORTHO05D007046 2.9e-173 612.8 678 49.9
Gorai.007G332400 Gossypium raimondii HOM05D005685 ORTHO05D007046 3.8e-173 612.5 666 51.5
Potri.001G380900 Populus trichocarpa HOM05D005685 ORTHO05D007046 2.7e-171 606.3 664 50.3
Migut.M00685 Erythranthe guttata HOM05D005685 ORTHO05D007046 1.1e-169 600.9 661 50.1
Potri.011G102100 Populus trichocarpa HOM05D005685 ORTHO05D007046 1.9e-169 600.1 664 50.6
PSO063G4015 Papaver somniferum HOM05D005685 ORTHO05D007046 3.1e-167 592.8 679 48.3
PSO782G3742 Papaver somniferum HOM05D005685 ORTHO05D007046 3.1e-167 592.8 679 47.9
Sabra16G0251100 Salix brachista HOM05D005685 ORTHO05D007046 1.5e-166 590.5 690 48.0
Sabra11G0083400 Salix brachista HOM05D005685 ORTHO05D007046 4.4e-166 589.0 667 49.6
PGR031G3876 Punica granatum HOM05D005685 ORTHO05D007046 2.2e-165 586.6 665 48.7
Aqoxy4G01266 Aquilegia oxysepala HOM05D005685 ORTHO05D007046 3.8e-165 585.9 678 47.6
SGA_v2.0_scaffold73G24373 Striga asiatica HOM05D005685 ORTHO05D007046 3.2e-164 582.8 645 49.6
Sc03g0010780 Simmondsia chinensis HOM05D005685 ORTHO05D007046 4.2e-164 582.4 668 48.2
FvH4_3g17370 Fragaria vesca HOM05D005685 ORTHO05D007046 3.0e-162 576.2 659 50.1
Cfa019501 Carpinus fangiana HOM05D005685 ORTHO05D007046 9.6e-161 571.2 552 55.4
ECA234G1223 Erigeron canadensis HOM05D005685 ORTHO05D007046 3.6e-160 569.3 677 48.4
FAN16G1001 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.4e-159 567.4 637 51.0
EL10Ac4g08448 Beta vulgaris HOM05D005685 ORTHO05D007046 2.0e-158 563.5 653 45.8
MELO3C016678.2 Cucumis melo HOM05D005685 ORTHO05D007046 2.2e-157 560.1 730 44.8
Sp1g15160 Schrenkiella parvula HOM05D005685 ORTHO05D007046 1.4e-156 557.4 659 46.7
Thhalv10006979m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 3.2e-156 556.2 665 46.3
THA.LOC104808083 Tarenaya hassleriana HOM05D005685 ORTHO05D007046 4.2e-156 555.8 660 47.1
FAN25G1369 Fragaria x ananassa HOM05D005685 ORTHO05D007046 7.9e-155 551.6 659 48.6
CARHR017570 Cardamine hirsuta HOM05D005685 ORTHO05D007046 2.1e-152 543.5 673 45.2
Ca_12745_v3 Cicer arietinum L. HOM05D005685 ORTHO05D007046 4.5e-150 535.8 661 44.8
Duzib213G0171 Durio zibethinus HOM05D005685 ORTHO05D007046 5.8e-150 535.4 678 46.3
AL7G51000 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 9.9e-150 534.6 664 46.2
Carub.0001s1676 Capsella rubella HOM05D005685 ORTHO05D007046 1.3e-149 534.3 659 46.1
AUR62019678 Chenopodium quinoa HOM05D005685 ORTHO05D007046 4.9e-149 532.3 656 44.5
Sp5g33630 Schrenkiella parvula HOM05D005685 ORTHO05D007046 2.5e-148 530.0 671 44.9
A06p12940 Brassica napus HOM05D005685 ORTHO05D007046 1.6e-147 527.3 657 45.2
Ah.03g134490 Amaranthus hybridus HOM05D005685 ORTHO05D007046 2.7e-147 526.6 653 44.3
BraA06t24453Z Brassica rapa HOM05D005685 ORTHO05D007046 6.0e-147 525.4 658 45.0
C05p15360 Brassica napus HOM05D005685 ORTHO05D007046 1.0e-146 524.6 657 44.9
FAN21G3337 Fragaria x ananassa HOM05D005685 ORTHO05D007046 1.5e-145 520.8 676 46.0
Thhalv10018251m.g Eutrema salsugineum HOM05D005685 ORTHO05D007046 2.8e-144 516.5 656 45.9
BolC5t30242H Brassica oleracea HOM05D005685 ORTHO05D007046 8.2e-144 515.0 684 43.1
AT1G78540 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.4e-143 514.2 658 45.1
ATR0665G442 Amborella trichopoda HOM05D005685 ORTHO05D007046 7.6e-142 508.4 673 43.8
AL2G38940 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 1.0e-141 508.1 645 45.7
AUR62013935 Chenopodium quinoa HOM05D005685 ORTHO05D007046 8.4e-141 505.0 666 41.7
Carub.0002s2539 Capsella rubella HOM05D005685 ORTHO05D007046 1.9e-140 503.8 657 43.5
Aa31LG7G1870 Aethionema arabicum HOM05D005685 ORTHO05D007046 4.2e-140 502.7 667 43.8
unitig_747.g21593 Utricularia gibba HOM05D005685 ORTHO05D007046 1.0e-138 498.0 664 44.6
Nitab4.5_0001140g0120 Nicotiana tabacum HOM05D005685 ORTHO05D007046 6.7e-138 495.4 617 46.5
CARHR072030 Cardamine hirsuta HOM05D005685 ORTHO05D007046 8.2e-136 488.4 665 42.7
AT1G17040 Arabidopsis thaliana HOM05D005685 ORTHO05D007046 1.4e-132 477.6 628 44.3
AL1G29220 Arabidopsis lyrata HOM05D005685 ORTHO05D007046 7.9e-131 471.9 607 45.5
Zm00001eb004590 Zea mays HOM05D005685 ORTHO05D007046 1.3e-128 464.5 673 40.7
Aa31LG4G2430 Aethionema arabicum HOM05D005685 ORTHO05D007046 1.2e-126 458.0 628 41.6
CSS0011531 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 3.4e-126 456.4 376 61.4
Glyma.15G211900 Glycine max HOM05D005685 ORTHO05D007046 1.3e-120 438.0 455 51.6
Pp3c20_21160 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.6e-115 421.0 741 37.4
BcaC05g25679 Brassica carinata HOM05D005685 ORTHO05D007046 8.0e-115 418.7 559 44.0
RhsimUnG0062900 Rhododendron simsii HOM05D005685 ORTHO05D007046 1.4e-114 417.9 428 56.5
arahy.Tifrunner.gnm1.ann1.TIF1LK Arachis hypogaea HOM05D005685 ORTHO05D007046 4.4e-113 412.9 477 48.6
arahy.Tifrunner.gnm1.ann1.4M0U4E Arachis hypogaea HOM05D005685 ORTHO05D007046 9.7e-113 411.8 477 48.4
SEGI_25985 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 6.3e-112 409.1 632 38.6
BcaB02g06680 Brassica carinata HOM05D005685 ORTHO05D007046 1.2e-110 404.8 529 45.7
Mapoly0011s0171 Marchantia polymorpha HOM05D005685 ORTHO05D007046 3.8e-109 399.8 726 37.3
AagrBONN_evm.TU.Sc2ySwM_228.1006 Anthoceros agrestis HOM05D005685 ORTHO05D007046 1.1e-108 398.3 727 37.1
DCAR_013783 Daucus carota HOM05D005685 ORTHO05D007046 2.4e-103 380.6 675 37.0
FAN11G3672 Fragaria x ananassa HOM05D005685 ORTHO05D007046 2.0e-102 377.5 451 49.7
SMO351G0414 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 7.7e-102 375.6 583 39.8
CDE04G2909 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 5.4e-87 326.2 352 49.4
Nitab4.5_0003618g0060 Nicotiana tabacum HOM05D005685 ORTHO05D007046 8.0e-83 312.4 674 35.3
HPP92_014870 Vanilla planifolia HOM05D005685 ORTHO05D007046 5.2e-82 309.7 570 34.2
Eucgr.F03221 Eucalyptus grandis HOM05D005685 ORTHO05D007046 6.0e-70 269.6 374 41.7
RcHm_v2.0_Chr5g0028891 Rosa chinensis HOM05D005685 ORTHO05D007046 8.6e-69 265.8 276 52.2
Eucgr.F03222 Eucalyptus grandis HOM05D005685 ORTHO05D007046 3.3e-68 263.8 250 56.0
TWI38G0887 Tripterygium wilfordii HOM05D005685 ORTHO05D007046 4.3e-68 263.5 258 51.6
Glyma.15G212100 Glycine max HOM05D005685 ORTHO05D007046 2.1e-62 244.6 144 73.6
CDE04G0489 Ceratophyllum demersum HOM05D005685 ORTHO05D007046 2.3e-61 241.1 277 49.5
CSS0047371 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 5.8e-57 226.5 117 83.8
BraA06t26874Z Brassica rapa HOM05D005685 ORTHO05D007046 6.4e-56 223.0 377 38.2
Os10g0567300 Oryza sativa ssp. japonica HOM05D005685 ORTHO05D007046 1.2e-46 192.2 275 41.5
Zm00001eb210210 Zea mays HOM05D005685 ORTHO05D007046 4.9e-32 143.7 154 47.4
MBI19_g17443_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 1.1e-31 142.5 99 71.7
Pp3c7_2410 Physcomitrium patens HOM05D005685 ORTHO05D007046 1.2e-25 122.5 137 50.4
SMO145G0004 Selaginella moellendorffii HOM05D005685 ORTHO05D007046 1.5e-25 122.1 150 48.7
Mapoly0028s0082 Marchantia polymorpha HOM05D005685 ORTHO05D007046 1.0e-24 119.4 135 47.4
CBR_g19551 Chara braunii HOM05D005685 ORTHO05D007046 2.2e-24 118.2 132 50.0
SEGI_34067 Sequoiadendron giganteum HOM05D005685 ORTHO05D007046 3.8e-24 117.5 128 48.4
CBR_g28498 Chara braunii HOM05D005685 ORTHO05D007046 3.2e-15 87.8 75 57.3
CSS0003149 Camellia sinensis var. sinensis HOM05D005685 ORTHO05D007046 9.7e-12 76.3 76 57.9
Eucgr.F01010 Eucalyptus grandis HOM05D000783 ORTHO05D000705 1.7e-08 65.5 68 50.0
MBI19_g17438_MAGBIO Magnolia biondii HOM05D005685 ORTHO05D007046 1.7e-08 65.5 59 54.2
RcHm_v2.0_Chr5g0028901 Rosa chinensis HOM05D005685 ORTHO05D007046 2.5e-07 61.6 40 67.5


User provided reference genes

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