Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C816T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-104 382.9 187 100.0
Lj6C514G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-70 268.5 345 48.7
Lj9C343T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-51 207.2 315 41.6
Lju1680C2T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-44 183.7 165 57.6
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 5.9e-34 148.3 165 47.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-32 141.0 196 40.8
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-31 139.0 140 50.0
Lj7A594T54 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-30 136.3 218 43.1
Lj4A452T5 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-30 134.8 78 88.5
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-29 133.3 140 48.6
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-29 132.9 273 34.8
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-29 132.9 147 47.6
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-29 132.5 140 49.3
Lj4C452T1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.5e-29 131.3 69 89.9
Lj6C647G6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-26 122.9 65 86.2
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-25 120.2 300 30.7
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-25 119.8 167 40.7
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-25 118.2 171 40.4
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-24 115.2 179 38.0
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 9.5e-24 114.4 231 33.3
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-23 113.6 196 35.2
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-23 113.2 196 35.2
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-23 111.7 196 35.2
Lj4A52T44 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-23 111.3 88 64.8
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-22 108.2 197 34.5
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-22 107.8 169 37.3
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 8.9e-22 107.8 158 40.5
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-21 106.7 193 34.7
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-20 103.6 196 32.7
Lj4C621T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-20 103.6 103 50.5
Lj3C888T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-20 102.1 90 54.4
Lju188C6G6 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-20 101.7 144 41.0
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 8.3e-20 101.3 193 33.7
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-19 100.5 148 40.5
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-19 100.5 180 33.9
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-19 98.2 139 40.3
Lju1074A3T39 Lonicera japonica HOM05D000176 ORTHO05D002183 9.2e-19 97.8 68 72.1
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-18 97.1 102 49.0
Lj5A194T79 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-18 96.3 133 39.8
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-16 90.9 168 34.5
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-16 90.5 184 32.6
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-16 90.1 187 29.4
Lj5C659T2 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-16 89.4 133 38.3
Lj2A512T36 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-16 89.0 264 30.3
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-16 89.0 188 30.9
Lj2A942G28 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-16 88.2 99 48.5
Lj7C461T7 Lonicera japonica HOM05D000176 ORTHO05D000106 7.3e-16 88.2 185 35.1
Lj7C228G3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-15 87.4 99 46.5
Lj9C183T0 Lonicera japonica HOM05D000176 ORTHO05D002183 3.6e-15 85.9 56 75.0
Lju1295A4T34 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-14 83.2 185 35.1
Lj2C466G13 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-14 82.4 129 37.2
Lj7C321G1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-14 81.6 62 59.7
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-13 80.9 103 45.6
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-13 80.5 127 37.8
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-13 80.1 103 44.7
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-13 79.7 231 28.1
Lj1C600T2 Lonicera japonica HOM05D000176 ORTHO05D000106 4.4e-13 79.0 103 43.7
Lj2A87G47 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-13 77.8 126 34.9
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-13 77.8 134 35.1
Lj7C702T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-12 77.4 118 39.8
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 1.7e-12 77.0 169 32.0
Lj9A506T41 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-12 77.0 295 26.4
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-12 76.6 240 28.8
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-12 75.9 99 44.4
Lj3A875G59 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-12 75.9 99 40.4
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.7e-12 75.9 82 43.9
Lj3C84G3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-12 75.5 77 45.5
Lju41C46T7 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-12 74.7 179 32.4
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 1.1e-11 74.3 133 33.8
Lj5C240T12 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 73.6 103 41.7
Lj7A336T29 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-11 73.6 45 64.4
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 5.4e-11 72.0 190 28.9
EL10Ac3g06792 Beta vulgaris HOM05D000176 ORTHO05D000106 7.1e-11 71.6 77 45.5
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 7.1e-11 71.6 131 32.8
Lj1C592T6 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-11 71.6 188 33.0
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 7.1e-11 71.6 101 41.6
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 7.1e-11 71.6 130 33.8
Lj2C799T2 Lonicera japonica HOM05D000176 ORTHO05D000106 9.2e-11 71.2 99 40.4
Lj4A736T37 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-10 70.5 37 78.4
Lj4C751G10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-10 70.1 45 62.2
Lj7A309T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-10 69.7 45 64.4
Lj8A506T8 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-10 69.7 146 34.2
Lj3A581T20 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-10 69.3 45 60.0
Lj3A82T20 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-10 69.3 156 29.5
Lj4A456T44 Lonicera japonica HOM05D000176 ORTHO05D000106 4.6e-10 68.9 42 64.3
Lj2A866T16 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-10 68.6 40 65.0
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-09 67.8 99 41.4
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 1.0e-09 67.8 193 25.4
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-09 67.4 112 37.5
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-09 67.4 180 28.9
Lju2561C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-09 67.4 45 60.0
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 1.3e-09 67.4 193 25.4
Hma1.2p1_0293F.1_g116320 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.3e-09 66.6 194 25.8
Hma1.2p1_0622F.1_g190860 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.0e-09 66.2 88 39.8
Hma1.2p1_0690F.1_g203890 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 3.0e-09 66.2 194 25.8
Lj1C830T3 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-09 65.9 123 32.5
Lju41C56T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-09 65.9 188 29.8
Lj4P278T38 Lonicera japonica HOM05D000176 ORTHO05D000106 5.1e-09 65.5 99 40.4
Lj2A664T7 Lonicera japonica HOM05D000176 ORTHO05D002183 6.6e-09 65.1 45 53.3
Lj7A349G73 Lonicera japonica HOM05D000176 ORTHO05D000106 6.6e-09 65.1 87 42.5
Hma1.2p1_1995F.1_g310310 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 1.5e-08 63.9 134 29.1
Lj1A1169T72 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-08 63.9 133 30.1
Hma1.2p1_0913F.1_g236030 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 2.5e-08 63.2 127 29.1
Lju158C6T6 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-08 62.8 37 67.6
Hma1.2p1_0111F.1_g053640 Hydrangea macrophylla HOM05D000176 ORTHO05D000106 4.3e-08 62.4 134 29.9
Lj2P387T42 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-08 62.4 90 42.2
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 5.6e-08 62.0 195 24.1
Lj2A197T66 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-08 61.2 105 38.1
Lj9A187T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-08 61.2 105 38.1
Lj2A419T34 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-07 60.8 174 32.8
Lj7C274G1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.2e-07 60.8 41 58.5
Lj4A157T27 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 60.1 51 58.8
Lj6A53G35 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-07 60.1 64 42.2
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-07 59.7 135 35.6
Lj6C620T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-07 58.9 206 29.1
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 4.7e-07 58.9 170 27.6
Ah.01g016230 Amaranthus hybridus HOM05D000176 ORTHO05D000106 6.2e-07 58.5 67 46.3
Ah.01g016340 Amaranthus hybridus HOM05D000176 ORTHO05D000106 6.2e-07 58.5 67 46.3
Lj5C240T11 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-07 58.5 37 62.2
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-07 58.2 98 37.8
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 8.1e-07 58.2 101 38.6
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.8 98 38.8
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.8 98 37.8
Lj9C86T6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-06 57.8 40 70.0
FvH4_5g13891 Fragaria vesca HOM05D000176 ORTHO05D000106 1.4e-06 57.4 38 55.3
Lj9P643T18 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-06 57.4 102 38.2
Lj4A163G72 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-06 56.6 43 51.2
Lj9P614T42 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-06 56.6 86 40.7
Ah.01g016400 Amaranthus hybridus HOM05D000176 ORTHO05D000106 3.1e-06 56.2 67 44.8
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-06 56.2 98 37.8
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 3.1e-06 56.2 86 38.4
FAN24G0751 Fragaria x ananassa HOM05D000176 ORTHO05D002183 5.2e-06 55.5 40 52.5
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-06 55.5 98 36.7
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 5.2e-06 55.5 112 36.6
Lj9P676T51 Lonicera japonica HOM05D000176 ORTHO05D000106 6.8e-06 55.1 87 39.1


User provided reference genes

Program Settings