Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C780G17 Lonicera japonica HOM05D003996 ORTHO05D004665 0.0e+00 1097.8 574 100.0
Dinv39747 Davidia involucrata HOM05D003996 ORTHO05D004665 7.3e-224 780.8 581 73.1
Dinv08722 Davidia involucrata HOM05D003996 ORTHO05D004665 1.7e-212 743.0 558 69.5
Hma1.2p1_0177F.1_g078040 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 6.6e-209 731.1 584 66.6
Actinidia10801 Actinidia chinensis HOM05D003996 ORTHO05D004665 1.1e-206 723.8 580 64.8
Oeu010926.4 Olea europaea HOM05D003996 ORTHO05D004665 2.6e-205 719.2 608 61.3
Oeu046908.1 Olea europaea HOM05D003996 ORTHO05D004665 9.8e-205 717.2 580 61.2
Rhsim04G0050600 Rhododendron simsii HOM05D003996 ORTHO05D004665 2.2e-204 716.1 583 62.8
CSS0033567 Camellia sinensis var. sinensis HOM05D003996 ORTHO05D004665 6.0e-202 708.0 583 64.5
Hma1.2p1_2319F.1_g319820 Hydrangea macrophylla HOM05D003996 ORTHO05D004665 5.6e-200 701.4 594 63.8
Sabra14G0120200 Salix brachista HOM05D003996 ORTHO05D004665 2.8e-199 699.1 576 62.5
Duzib138G0037 Durio zibethinus HOM05D003996 ORTHO05D004665 6.2e-199 698.0 576 63.0
Thecc.01G181600 Theobroma cacao HOM05D003996 ORTHO05D004665 3.1e-198 695.7 573 63.4
Gorai.001G196200 Gossypium raimondii HOM05D003996 ORTHO05D004665 3.4e-197 692.2 580 63.1
QL08p030755 Quercus lobata HOM05D003996 ORTHO05D004665 3.4e-197 692.2 572 63.5
Potri.014G158200 Populus trichocarpa HOM05D003996 ORTHO05D004665 5.8e-197 691.4 577 62.0
Cc05_g02970 Coffea canephora HOM05D003996 ORTHO05D004665 1.7e-196 689.9 577 64.3
TWI75G1163 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 8.4e-196 687.6 577 62.2
GSVIVG01030501001 Vitis vinifera HOM05D003996 ORTHO05D004665 1.9e-195 686.4 577 64.8
TWI36G0149 Tripterygium wilfordii HOM05D003996 ORTHO05D004665 3.2e-195 685.6 581 61.3
Ciclev10014490m.g Citrus clementina HOM05D003996 ORTHO05D004665 1.2e-194 683.7 579 62.0
Haze_12770 Corylus avellana HOM05D003996 ORTHO05D004665 2.1e-194 682.9 556 65.6
Gohir.D07G175200 Gossypium hirsutum HOM05D003996 ORTHO05D004665 7.8e-194 681.0 580 65.3
Gohir.A07G168800 Gossypium hirsutum HOM05D003996 ORTHO05D004665 5.1e-193 678.3 580 64.5
Lsat_1_v5_gn_7_95060 Lactuca sativa HOM05D003996 ORTHO05D004665 8.6e-193 677.6 573 60.6
Manes.13G066300 Manihot esculenta HOM05D003996 ORTHO05D004665 3.3e-192 675.6 580 60.2
vmacro09358 Vaccinium macrocarpon HOM05D003996 ORTHO05D004665 7.3e-192 674.5 584 60.4
MSTRG.14132 Avicennia marina HOM05D003996 ORTHO05D004665 1.6e-191 673.3 575 61.7
Migut.H01245 Erythranthe guttata HOM05D003996 ORTHO05D004665 1.6e-191 673.3 587 60.8
HanXRQChr16g0506421 Helianthus annuus HOM05D003996 ORTHO05D004665 2.1e-191 672.9 584 58.9
Nn1g07292 Nelumbo nucifera HOM05D003996 ORTHO05D004665 4.0e-190 668.7 583 60.2
Potri.002G224900 Populus trichocarpa HOM05D003996 ORTHO05D004665 4.0e-190 668.7 577 60.7
DCAR_012922 Daucus carota HOM05D003996 ORTHO05D004665 5.2e-190 668.3 576 60.4
Peaxi162Scf00921g00252 Petunia axillaris HOM05D003996 ORTHO05D004665 9.3e-187 657.5 572 62.9
Manes.12G069800 Manihot esculenta HOM05D003996 ORTHO05D004665 3.5e-186 655.6 579 63.6
CANSAT64G2545 Cannabis sativa HOM05D003996 ORTHO05D004665 7.8e-186 654.4 568 60.9
MBI16_g26185_MAGBIO Magnolia biondii HOM05D003996 ORTHO05D004665 1.0e-185 654.1 590 60.0
SGA_v2.0_scaffold159G37554 Striga asiatica HOM05D003996 ORTHO05D004665 2.3e-185 652.9 576 60.1
Hund15359 Selenicereus undatus HOM05D003996 ORTHO05D004665 8.7e-185 651.0 586 58.2
Atru.chr6.3252 Acer truncatum HOM05D003996 ORTHO05D004665 1.5e-184 650.2 580 60.3
Duzib211G0403 Durio zibethinus HOM05D003996 ORTHO05D004665 3.3e-184 649.0 590 59.7
Aqoxy1G02929 Aquilegia oxysepala HOM05D003996 ORTHO05D004665 9.6e-184 647.5 583 58.5
Gorai.001G095400 Gossypium raimondii HOM05D003996 ORTHO05D004665 9.0e-182 641.0 574 58.7
ECA236G3366 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.2e-181 640.6 570 63.2
Gohir.D07G089000 Gossypium hirsutum HOM05D003996 ORTHO05D004665 1.3e-180 637.1 574 58.5
Sed0004670 Sechium edule HOM05D003996 ORTHO05D004665 3.8e-180 635.6 580 59.3
CAN.G1493.1 Capsicum annuum HOM05D003996 ORTHO05D004665 6.4e-180 634.8 581 58.3
Nitab4.5_0000482g0250 Nicotiana tabacum HOM05D003996 ORTHO05D004665 6.4e-180 634.8 585 59.1
PGSC0003DMG400000690 Solanum tuberosum HOM05D003996 ORTHO05D004665 1.1e-179 634.0 582 58.8
Prupe.3G210900 Prunus persica HOM05D003996 ORTHO05D004665 2.4e-179 632.9 678 50.7
Nitab4.5_0008863g0010 Nicotiana tabacum HOM05D003996 ORTHO05D004665 1.2e-178 630.6 577 59.6
PSO541G1393 Papaver somniferum HOM05D003996 ORTHO05D004665 2.1e-178 629.8 586 56.7
Sopen07g024690 Solanum pennellii HOM05D003996 ORTHO05D004665 2.1e-178 629.8 582 58.1
MD09G1113700 Malus domestica HOM05D003996 ORTHO05D004665 2.7e-178 629.4 647 53.8
FAN02G1294 Fragaria x ananassa HOM05D003996 ORTHO05D004665 6.0e-178 628.2 624 54.5
Thhalv10016338m.g Eutrema salsugineum HOM05D003996 ORTHO05D004665 3.0e-177 625.9 583 57.5
Solyc07g049350.3 Solanum lycopersicum HOM05D003996 ORTHO05D004665 3.0e-177 625.9 582 57.9
THA.LOC104801005 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 3.9e-177 625.5 584 55.5
FAN09G4790 Fragaria x ananassa HOM05D003996 ORTHO05D004665 1.1e-176 624.0 625 54.2
ECA234G3864 Erigeron canadensis HOM05D003996 ORTHO05D004665 1.5e-176 623.6 566 57.6
RcHm_v2.0_Chr2g0158131 Rosa chinensis HOM05D003996 ORTHO05D004665 1.9e-176 623.2 618 54.0
FAN05G2256 Fragaria x ananassa HOM05D003996 ORTHO05D004665 5.6e-176 621.7 627 53.9
ClCG02G018060 Citrullus lanatus HOM05D003996 ORTHO05D004665 1.3e-175 620.5 589 57.0
C03p21510 Brassica napus HOM05D003996 ORTHO05D004665 3.6e-175 619.0 590 59.3
BolC3t14538H Brassica oleracea HOM05D003996 ORTHO05D004665 4.8e-175 618.6 590 59.3
PSO675G0796 Papaver somniferum HOM05D003996 ORTHO05D004665 1.1e-174 617.5 586 55.8
FvH4_6g42290 Fragaria vesca HOM05D003996 ORTHO05D004665 1.8e-174 616.7 619 53.5
Gohir.A07G082500 Gossypium hirsutum HOM05D003996 ORTHO05D004665 3.1e-174 615.9 574 60.3
BcaC01g05877 Brassica carinata HOM05D003996 ORTHO05D004665 4.0e-174 615.5 590 59.2
SalBow7G2067 Salvia bowleyana HOM05D003996 ORTHO05D004665 4.0e-174 615.5 580 56.0
Sp4g15330 Schrenkiella parvula HOM05D003996 ORTHO05D004665 4.0e-174 615.5 582 58.2
MELO3C019738.2 Cucumis melo HOM05D003996 ORTHO05D004665 6.9e-174 614.8 596 55.5
PSO210G1396 Papaver somniferum HOM05D003996 ORTHO05D004665 6.9e-174 614.8 589 55.7
AL4G28490 Arabidopsis lyrata HOM05D003996 ORTHO05D004665 1.2e-173 614.0 593 56.7
PSO832G2142 Papaver somniferum HOM05D003996 ORTHO05D004665 1.2e-173 614.0 589 55.3
DCAR_021140 Daucus carota HOM05D003996 ORTHO05D004665 2.0e-173 613.2 608 55.1
Eucgr.K00757 Eucalyptus grandis HOM05D003996 ORTHO05D004665 2.0e-173 613.2 579 55.4
A03p18420 Brassica napus HOM05D003996 ORTHO05D004665 4.5e-173 612.1 587 58.9
FAN14G1081 Fragaria x ananassa HOM05D003996 ORTHO05D004665 4.5e-173 612.1 619 53.3
AUR62032475 Chenopodium quinoa HOM05D003996 ORTHO05D004665 5.8e-173 611.7 583 55.2
Lj6g0017826 Lotus japonicus HOM05D003996 ORTHO05D004665 5.8e-173 611.7 576 57.5
Ah.03g136730 Amaranthus hybridus HOM05D003996 ORTHO05D004665 9.9e-173 610.9 590 55.9
Sabra02G0172000 Salix brachista HOM05D003996 ORTHO05D004665 3.8e-172 609.0 626 53.8
THA.LOC104826134 Tarenaya hassleriana HOM05D003996 ORTHO05D004665 2.4e-171 606.3 584 55.3
CsaV3_6G015350 Cucumis sativus L. HOM05D003996 ORTHO05D004665 3.2e-171 605.9 589 55.7
PGR142G3363 Punica granatum HOM05D003996 ORTHO05D004665 1.2e-170 604.0 577 56.0
CARHR126920 Cardamine hirsuta HOM05D003996 ORTHO05D004665 6.0e-170 601.7 595 54.3
AT2G32970 Arabidopsis thaliana HOM05D003996 ORTHO05D004665 1.0e-169 600.9 589 55.9
Lalb_Chr18g0049761 Lupinus albus HOM05D003996 ORTHO05D004665 1.8e-169 600.1 572 60.1
arahy.Tifrunner.gnm1.ann1.LM4IV6 Arachis hypogaea HOM05D003996 ORTHO05D004665 8.7e-169 597.8 569 55.4
VMungo0540G1114 Vigna mungo HOM05D003996 ORTHO05D004665 2.5e-168 596.3 594 56.2
Nn1g03381 Nelumbo nucifera HOM05D003996 ORTHO05D004665 1.4e-166 590.5 584 57.9
TAR626G1560 Trochodendron aralioides HOM05D003996 ORTHO05D004665 2.4e-166 589.7 584 56.7
Migut.M00422 Erythranthe guttata HOM05D003996 ORTHO05D004665 3.1e-166 589.3 566 56.4
Lalb_Chr15g0080851 Lupinus albus HOM05D003996 ORTHO05D004665 4.0e-166 589.0 574 58.7
Lj8A129T88 Lonicera japonica HOM05D003996 ORTHO05D004665 6.9e-166 588.2 580 61.2
ECA240G4712 Erigeron canadensis HOM05D003996 ORTHO05D004665 9.0e-166 587.8 579 55.8
EL10Ac6g13970 Beta vulgaris HOM05D003996 ORTHO05D004665 1.2e-165 587.4 567 55.0
Aa31LG5G4630 Aethionema arabicum HOM05D003996 ORTHO05D004665 2.0e-165 586.6 582 55.2
Carub.0004s1441 Capsella rubella HOM05D003996 ORTHO05D004665 3.4e-165 585.9 594 56.1
Phvul.006G012800 Phaseolus vulgaris HOM05D003996 ORTHO05D004665 2.2e-164 583.2 591 55.2
BcaB01g03955 Brassica carinata HOM05D003996 ORTHO05D004665 3.2e-163 579.3 585 56.8
AUR62040130 Chenopodium quinoa HOM05D003996 ORTHO05D004665 4.2e-163 578.9 583 53.0
Sed0016081 Sechium edule HOM05D003996 ORTHO05D004665 2.1e-162 576.6 584 54.6
TPR.G29036 Trifolium pratense HOM05D003996 ORTHO05D004665 2.1e-162 576.6 577 54.6
Psat5g111680 Pisum sativum HOM05D003996 ORTHO05D004665 4.6e-162 575.5 574 57.7
Ca_16283_v3 Cicer arietinum L. HOM05D003996 ORTHO05D004665 1.8e-161 573.5 551 56.4
MD17G1103800 Malus domestica HOM05D003996 ORTHO05D004665 2.3e-161 573.2 647 52.1
Medtr3g080400 Medicago truncatula HOM05D003996 ORTHO05D004665 5.1e-161 572.0 578 53.6
Glyma.20G056800 Glycine max HOM05D003996 ORTHO05D004665 4.3e-160 568.9 600 57.0
HanXRQChr10g0310161 Helianthus annuus HOM05D003996 ORTHO05D004665 2.4e-158 563.1 577 53.7
BraA05t20204Z Brassica rapa HOM05D003996 ORTHO05D004665 3.1e-158 562.8 578 55.9
A05p12660 Brassica napus HOM05D003996 ORTHO05D004665 5.3e-158 562.0 577 56.0
C04p16550 Brassica napus HOM05D003996 ORTHO05D004665 5.3e-158 562.0 580 56.4
BcaC02g11363 Brassica carinata HOM05D003996 ORTHO05D004665 1.2e-157 560.8 580 56.2
SGA_v2.0_scaffold70G23382 Striga asiatica HOM05D003996 ORTHO05D004665 2.6e-157 559.7 576 51.9
Lsat_1_v5_gn_9_105800 Lactuca sativa HOM05D003996 ORTHO05D004665 3.4e-157 559.3 591 51.9
HanXRQChr10g0306531 Helianthus annuus HOM05D003996 ORTHO05D004665 7.2e-155 551.6 568 53.2
BraA03t11105Z Brassica rapa HOM05D003996 ORTHO05D004665 6.1e-154 548.5 514 59.5
SHI10040 Sapria himalayana HOM05D003996 ORTHO05D000023 7.9e-154 548.1 610 50.2
BolC4t23207H Brassica oleracea HOM05D003996 ORTHO05D004665 1.8e-153 547.0 587 55.0
Lsat_1_v5_gn_5_124380 Lactuca sativa HOM05D003996 ORTHO05D004665 8.7e-153 544.7 566 51.8
arahy.Tifrunner.gnm1.ann1.ZWYX82 Arachis hypogaea HOM05D003996 ORTHO05D004665 7.4e-152 541.6 569 52.9
Sc06g0009640 Simmondsia chinensis HOM05D003996 ORTHO05D004665 3.7e-151 539.3 455 60.2
CiPaw.04G110600 Carya illinoinensis HOM05D003996 ORTHO05D004665 5.9e-149 531.9 466 59.2
Zm00001eb256350 Zea mays HOM05D003996 ORTHO05D004665 1.9e-147 526.9 588 49.8
HPP92_010852 Vanilla planifolia HOM05D003996 ORTHO05D004665 9.4e-139 498.0 576 47.7
Os02g0771800 Oryza sativa ssp. japonica HOM05D003996 ORTHO05D004665 3.6e-138 496.1 573 47.5
CDE07G0144 Ceratophyllum demersum HOM05D003996 ORTHO05D004665 6.1e-138 495.4 599 47.2
unitig_26.g9924 Utricularia gibba HOM05D003996 ORTHO05D004665 5.0e-132 475.7 490 52.2
DCAR_023146 Daucus carota HOM05D003996 ORTHO05D004665 1.8e-126 457.2 609 47.9
BcaB02g10511 Brassica carinata HOM05D003996 ORTHO05D004665 5.9e-125 452.2 446 57.6
BcaNung06410 Brassica carinata HOM05D003996 ORTHO05D004665 7.2e-123 445.3 584 49.1
COL.COLO4_21871 Corchorus olitorius HOM05D003996 ORTHO05D004665 2.1e-122 443.7 374 65.8
Glyma.13G026700 Glycine max HOM05D003996 ORTHO05D004665 7.7e-117 425.2 396 58.3
SEGI_14118 Sequoiadendron giganteum HOM05D003996 ORTHO05D004665 2.4e-110 403.7 675 38.4
CiPaw.03G155400 Carya illinoinensis HOM05D003996 ORTHO05D004665 2.2e-103 380.6 333 58.9
Sc05g0002040 Simmondsia chinensis HOM05D003996 ORTHO05D004665 7.3e-99 365.5 564 39.5
CANSAT01G0074 Cannabis sativa HOM05D003996 ORTHO05D004665 2.2e-95 354.0 564 39.5
AUR62001107 Chenopodium quinoa HOM05D003996 ORTHO05D004665 9.2e-94 348.6 573 38.7
GSVIVG01003286001 Vitis vinifera HOM05D003996 ORTHO05D004665 9.2e-94 348.6 565 39.3
AUR62008931 Chenopodium quinoa HOM05D003996 ORTHO05D004665 2.0e-93 347.4 595 37.5
EL10Ac7g17863 Beta vulgaris HOM05D003996 ORTHO05D004665 8.6e-92 342.0 566 38.2
SMO361G0133 Selaginella moellendorffii HOM05D003996 ORTHO05D004665 2.0e-88 330.9 593 38.3
Duzib133G0500 Durio zibethinus HOM05D003996 ORTHO05D004665 2.6e-88 330.5 563 37.8
Zm00001eb297890 Zea mays HOM05D003996 ORTHO05D004665 3.7e-87 326.6 585 37.8
Hund18404 Selenicereus undatus HOM05D003996 ORTHO05D004665 1.7e-84 317.8 572 37.2
Pp3c17_9940 Physcomitrium patens HOM05D003996 ORTHO05D004665 3.3e-83 313.5 667 34.6
Manes.13G046600 Manihot esculenta HOM05D003996 ORTHO05D004665 9.5e-83 312.0 495 40.2
Pp3c9_1750 Physcomitrium patens HOM05D003996 ORTHO05D004665 1.8e-81 307.8 685 35.2
CANSAT01G3237 Cannabis sativa HOM05D003996 ORTHO05D004665 2.9e-79 300.4 359 46.5
HPP92_011782 Vanilla planifolia HOM05D003996 ORTHO05D004665 5.1e-76 289.7 332 46.1
Mapoly0071s0059 Marchantia polymorpha HOM05D003996 ORTHO05D004665 8.1e-74 282.3 745 30.9
AagrBONN_evm.TU.Sc2ySwM_368.1061 Anthoceros agrestis HOM05D003996 ORTHO05D004665 1.5e-72 278.1 693 32.3
Ah.08g214450 Amaranthus hybridus HOM05D003996 ORTHO05D004665 8.1e-66 255.8 446 37.4
Hund05567 Selenicereus undatus HOM05D003996 ORTHO05D004665 3.1e-65 253.8 465 35.5
CBR_g29855 Chara braunii HOM05D003996 ORTHO05D004665 1.6e-53 214.9 324 36.7
Cpa.g.sc132.19 Carica papaya HOM05D003996 ORTHO05D004665 2.7e-53 214.2 236 51.7
COL.COLO4_21870 Corchorus olitorius HOM05D003996 ORTHO05D004665 3.9e-52 210.3 151 68.9
CiPaw.03G155500 Carya illinoinensis HOM05D003996 ORTHO05D004665 9.0e-49 199.1 155 65.8
Actinidia03595 Actinidia chinensis HOM05D003996 ORTHO05D004665 3.9e-36 157.1 93 76.3
Actinidia03594 Actinidia chinensis HOM05D003996 ORTHO05D004665 7.2e-30 136.3 93 71.0
Hund15378 Selenicereus undatus HOM05D003996 ORTHO05D004665 2.9e-23 114.4 110 58.2
Actinidia03596 Actinidia chinensis HOM05D003996 ORTHO05D004665 3.0e-20 104.4 108 50.9
Thecc.01G223400 Theobroma cacao HOM05D003996 ORTHO05D004665 1.3e-18 99.0 147 42.9
MCO15G069 Micromonas commoda HOM05D003996 ORTHO05D004665 2.1e-13 81.6 159 35.2
Cre12.g513852 Chlamydomonas reinhardtii HOM05D003996 ORTHO05D004665 8.0e-13 79.7 161 36.6
DCAR_019433 Daucus carota HOM05D003996 ORTHO05D004665 1.3e-10 72.4 53 69.8
BcaC09g50171 Brassica carinata HOM05D003996 ORTHO05D092235 2.2e-07 61.6 48 60.4
Ah.08g214440 Amaranthus hybridus HOM05D003996 ORTHO05D004665 1.5e-06 58.9 81 43.2


User provided reference genes

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