Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C74G4 Lonicera japonica HOM05D006027 ORTHO05D007604 6.6e-99 364.0 179 100.0
Dinv43066 Davidia involucrata HOM05D006027 ORTHO05D007604 4.5e-71 271.6 158 85.4
QL09p041558 Quercus lobata HOM05D006027 ORTHO05D007604 1.6e-68 263.1 156 84.0
CSS0012566 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 5.1e-67 258.1 158 81.6
Oeu015437.1 Olea europaea HOM05D006027 ORTHO05D007604 8.7e-67 257.3 160 81.2
CSS0010160 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 1.5e-66 256.5 158 81.0
Duzib211G0648 Durio zibethinus HOM05D006027 ORTHO05D007604 3.7e-65 251.9 158 79.1
Gohir.A07G152700 Gossypium hirsutum HOM05D006027 ORTHO05D007604 6.2e-65 251.1 158 80.4
Actinidia23700 Actinidia chinensis HOM05D006027 ORTHO05D007604 1.1e-64 250.4 159 78.0
DCAR_000568 Daucus carota HOM05D006027 ORTHO05D007604 4.0e-64 248.4 150 81.3
GSVIVG01028434001 Vitis vinifera HOM05D006027 ORTHO05D007604 5.3e-64 248.1 158 75.9
Gorai.001G182100 Gossypium raimondii HOM05D006027 ORTHO05D007604 6.9e-64 247.7 158 79.1
Gohir.D07G158900 Gossypium hirsutum HOM05D006027 ORTHO05D007604 1.2e-63 246.9 158 79.1
Eucgr.K01424 Eucalyptus grandis HOM05D006027 ORTHO05D007604 2.6e-63 245.7 158 77.8
Atru.chr5.1865 Acer truncatum HOM05D006027 ORTHO05D007604 4.5e-63 245.0 158 77.2
Prupe.8G215000 Prunus persica HOM05D006027 ORTHO05D007604 5.8e-63 244.6 158 78.5
Thecc.01G249800 Theobroma cacao HOM05D006027 ORTHO05D007604 5.8e-63 244.6 152 81.6
PGSC0003DMG400008585 Solanum tuberosum HOM05D006027 ORTHO05D007604 7.6e-63 244.2 159 78.6
Migut.D00479 Erythranthe guttata HOM05D006027 ORTHO05D007604 1.0e-62 243.8 159 76.1
Sopen09g025650 Solanum pennellii HOM05D006027 ORTHO05D007604 1.0e-62 243.8 159 78.6
CANSAT01G2333 Cannabis sativa HOM05D006027 ORTHO05D007604 1.7e-62 243.0 153 80.4
Solyc09g064500.3 Solanum lycopersicum HOM05D006027 ORTHO05D007604 1.7e-62 243.0 159 78.6
CANSAT01G0515 Cannabis sativa HOM05D006027 ORTHO05D007604 2.9e-62 242.3 153 80.4
Nitab4.5_0002435g0010 Nicotiana tabacum HOM05D006027 ORTHO05D007604 3.8e-62 241.9 159 77.4
vmacro14793 Vaccinium macrocarpon HOM05D006027 ORTHO05D007604 4.9e-62 241.5 159 77.4
Actinidia09513 Actinidia chinensis HOM05D006027 ORTHO05D007604 6.5e-62 241.1 158 75.9
Cc01_g17770 Coffea canephora HOM05D006027 ORTHO05D007604 6.5e-62 241.1 148 81.8
Oeu052083.1 Olea europaea HOM05D006027 ORTHO05D007604 6.5e-62 241.1 147 83.7
CAN.G536.12 Capsicum annuum HOM05D006027 ORTHO05D007604 8.4e-62 240.7 159 77.4
FAN15G2830 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.1e-61 240.4 158 77.2
FAN27G2528 Fragaria x ananassa HOM05D006027 ORTHO05D007604 1.1e-61 240.4 158 77.2
Nitab4.5_0000845g0140 Nicotiana tabacum HOM05D006027 ORTHO05D007604 1.4e-61 240.0 159 76.7
Cfa002488 Carpinus fangiana HOM05D006027 ORTHO05D007604 1.9e-61 239.6 162 75.9
PGR044G2038 Punica granatum HOM05D006027 ORTHO05D007604 1.9e-61 239.6 158 76.6
Rhsim01G0260300 Rhododendron simsii HOM05D006027 ORTHO05D007604 1.9e-61 239.6 154 79.2
Lalb_Chr06g0170731 Lupinus albus HOM05D006027 ORTHO05D007604 2.5e-61 239.2 161 75.8
Glyma.13G127200 Glycine max HOM05D006027 ORTHO05D007604 3.2e-61 238.8 152 78.9
Manes.12G038000 Manihot esculenta HOM05D006027 ORTHO05D007604 4.2e-61 238.4 152 78.3
Duzib138G0534 Durio zibethinus HOM05D006027 ORTHO05D007604 5.5e-61 238.0 152 78.9
Lsat_1_v5_gn_5_181161 Lactuca sativa HOM05D006027 ORTHO05D007604 5.5e-61 238.0 159 75.5
Lalb_Chr02g0152741 Lupinus albus HOM05D006027 ORTHO05D007604 5.5e-61 238.0 161 75.8
MD05G1188500 Malus domestica HOM05D006027 ORTHO05D007604 5.5e-61 238.0 158 77.2
Haze_24710 Corylus avellana HOM05D006027 ORTHO05D007604 7.1e-61 237.7 162 75.3
HanXRQChr01g0014971 Helianthus annuus HOM05D006027 ORTHO05D007604 9.3e-61 237.3 158 74.7
FvH4_2g20470 Fragaria vesca HOM05D006027 ORTHO05D007604 2.1e-60 236.1 158 75.9
FAN24G3422 Fragaria x ananassa HOM05D006027 ORTHO05D007604 2.1e-60 236.1 158 75.9
TAR633G0397 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.1e-60 236.1 153 77.8
TAR362G0914 Trochodendron aralioides HOM05D006027 ORTHO05D007604 2.7e-60 235.7 153 78.4
MD10G1176000 Malus domestica HOM05D006027 ORTHO05D007604 4.6e-60 235.0 158 76.6
Sabra02G0194900 Salix brachista HOM05D006027 ORTHO05D007604 1.0e-59 233.8 153 76.5
Potri.002G256400 Populus trichocarpa HOM05D006027 ORTHO05D007604 1.3e-59 233.4 153 77.1
Manes.13G039500 Manihot esculenta HOM05D006027 ORTHO05D007604 5.1e-59 231.5 153 75.2
ClCG06G001400 Citrullus lanatus HOM05D006027 ORTHO05D007604 6.7e-59 231.1 157 73.2
MELO3C022393.2 Cucumis melo HOM05D006027 ORTHO05D007604 8.7e-59 230.7 154 74.0
ECA248G3782 Erigeron canadensis HOM05D006027 ORTHO05D007604 8.7e-59 230.7 157 72.0
Glyma.10G040600 Glycine max HOM05D006027 ORTHO05D007604 1.9e-58 229.6 152 75.0
Nn3g19801 Nelumbo nucifera HOM05D006027 ORTHO05D007604 2.5e-58 229.2 157 73.9
Phvul.007G153500 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 2.5e-58 229.2 152 77.0
arahy.Tifrunner.gnm1.ann1.72UZ71 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.3e-58 228.4 151 76.2
arahy.Tifrunner.gnm1.ann1.FRV526 Arachis hypogaea HOM05D006027 ORTHO05D007604 4.3e-58 228.4 151 76.2
VMungo0720G1620 Vigna mungo HOM05D006027 ORTHO05D007604 4.3e-58 228.4 152 75.7
SGA_v2.0_scaffold1G00660 Striga asiatica HOM05D006027 ORTHO05D007604 9.6e-58 227.3 165 72.7
Lj5g0017558 Lotus japonicus HOM05D006027 ORTHO05D007604 1.3e-57 226.9 152 75.0
Psat6g062520 Pisum sativum HOM05D006027 ORTHO05D007604 2.8e-57 225.7 155 76.8
TWI18G0031 Tripterygium wilfordii HOM05D006027 ORTHO05D007604 3.7e-57 225.3 158 70.3
TPR.G5919 Trifolium pratense HOM05D006027 ORTHO05D007604 4.8e-57 224.9 145 79.3
COL.COLO4_10205 Corchorus olitorius HOM05D006027 ORTHO05D007604 8.2e-57 224.2 113 93.8
Aqoxy5G00130 Aquilegia oxysepala HOM05D006027 ORTHO05D007604 1.1e-56 223.8 150 74.7
Ca_09646_v3 Cicer arietinum L. HOM05D006027 ORTHO05D007604 1.1e-56 223.8 144 78.5
Sed0007731 Sechium edule HOM05D006027 ORTHO05D007604 1.4e-56 223.4 146 72.6
Medtr1g069465 Medicago truncatula HOM05D006027 ORTHO05D007604 2.4e-56 222.6 145 78.6
Phvul.001G165200 Phaseolus vulgaris HOM05D006027 ORTHO05D007604 3.1e-56 222.2 151 72.8
PSO764G0320 Papaver somniferum HOM05D006027 ORTHO05D007604 5.3e-56 221.5 152 72.4
VMungo1383G1953 Vigna mungo HOM05D006027 ORTHO05D007604 6.9e-56 221.1 152 71.7
BraA01t00872Z Brassica rapa HOM05D006027 ORTHO05D007604 1.2e-55 220.3 155 68.4
Peaxi162Scf00043g00255 Petunia axillaris HOM05D006027 ORTHO05D007604 1.2e-55 220.3 115 91.3
BcaC06g32609 Brassica carinata HOM05D006027 ORTHO05D007604 1.5e-55 219.9 159 67.3
EL10Ac7g17691 Beta vulgaris HOM05D006027 ORTHO05D007604 4.5e-55 218.4 165 66.7
C01p10860 Brassica napus HOM05D006027 ORTHO05D007604 1.3e-54 216.9 175 60.6
AUR62025437 Chenopodium quinoa HOM05D006027 ORTHO05D007604 1.3e-54 216.9 153 71.9
PSO832G0858 Papaver somniferum HOM05D006027 ORTHO05D007604 1.3e-54 216.9 152 71.1
Sp7g26630 Schrenkiella parvula HOM05D006027 ORTHO05D007604 1.7e-54 216.5 149 70.5
MBI07_g08912_MAGBIO Magnolia biondii HOM05D006027 ORTHO05D007604 2.2e-54 216.1 154 72.1
SalBow4G0311 Salvia bowleyana HOM05D006027 ORTHO05D007604 2.9e-54 215.7 115 90.4
CDE02G4364 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 3.8e-54 215.3 150 70.7
AL7G23880 Arabidopsis lyrata HOM05D006027 ORTHO05D007604 5.0e-54 214.9 148 71.6
BcaNung04696 Brassica carinata HOM05D006027 ORTHO05D007604 8.4e-54 214.2 175 60.6
Carub.0007s1200 Capsella rubella HOM05D006027 ORTHO05D007604 1.1e-53 213.8 149 70.5
Thhalv10026347m.g Eutrema salsugineum HOM05D006027 ORTHO05D007604 1.1e-53 213.8 149 69.1
A01p09280 Brassica napus HOM05D006027 ORTHO05D007604 1.4e-53 213.4 156 66.7
Cpa.g.sc87.33 Carica papaya HOM05D006027 ORTHO05D007604 1.9e-53 213.0 115 86.1
Aa31LG2G21720 Aethionema arabicum HOM05D006027 ORTHO05D007604 2.5e-53 212.6 145 69.7
C07p56360 Brassica napus HOM05D006027 ORTHO05D007604 2.5e-53 212.6 176 60.8
BolC7t46115H Brassica oleracea HOM05D006027 ORTHO05D007604 2.5e-53 212.6 176 60.8
Zm00001eb141830 Zea mays HOM05D006027 ORTHO05D007604 2.5e-53 212.6 159 69.8
AT4G28660 Arabidopsis thaliana HOM05D006027 ORTHO05D007604 3.2e-53 212.2 148 70.9
A03p58340 Brassica napus HOM05D006027 ORTHO05D007604 9.3e-53 210.7 156 64.1
Zm00001eb141870 Zea mays HOM05D006027 ORTHO05D007604 9.3e-53 210.7 150 70.7
BolC1t01050H Brassica oleracea HOM05D000022 ORTHO05D000744 1.6e-52 209.9 168 61.9
Os01g0938100 Oryza sativa ssp. japonica HOM05D006027 ORTHO05D007604 1.6e-52 209.9 152 70.4
AUR62008802 Chenopodium quinoa HOM05D006027 ORTHO05D007604 2.1e-52 209.5 117 84.6
Ciclev10022322m.g Citrus clementina HOM05D006027 ORTHO05D007604 4.6e-52 208.4 145 71.0
CARHR236440 Cardamine hirsuta HOM05D006027 ORTHO05D007604 7.9e-52 207.6 149 68.5
THA.LOC104814531 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 3.0e-51 205.7 153 66.7
Hund18287 Selenicereus undatus HOM05D006027 ORTHO05D007604 2.5e-50 202.6 158 64.6
unitig_8.g3074 Utricularia gibba HOM05D006027 ORTHO05D007604 3.3e-50 202.2 145 68.3
HPP92_027289 Vanilla planifolia HOM05D006027 ORTHO05D007604 3.3e-50 202.2 159 62.3
THA.LOC104820068 Tarenaya hassleriana HOM05D006027 ORTHO05D007604 5.7e-50 201.4 154 67.5
ATR0787G157 Amborella trichopoda HOM05D006027 ORTHO05D007604 6.3e-49 198.0 115 80.0
Sc05g0002880 Simmondsia chinensis HOM05D006027 ORTHO05D007604 2.4e-48 196.1 145 72.4
Mapoly0042s0085 Marchantia polymorpha HOM05D006027 ORTHO05D007604 6.9e-48 194.5 151 63.6
HPP92_008468 Vanilla planifolia HOM05D006027 ORTHO05D007604 1.2e-47 193.7 163 61.3
SMO347G0509 Selaginella moellendorffii HOM05D006027 ORTHO05D007604 4.3e-42 175.3 115 72.2
Pp3c7_5450 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.3e-41 173.7 154 55.8
AagrBONN_evm.TU.Sc2ySwM_340.224 Anthoceros agrestis HOM05D006027 ORTHO05D007604 2.8e-41 172.6 109 71.6
Pp3c11_18280 Physcomitrium patens HOM05D006027 ORTHO05D007604 1.4e-40 170.2 163 50.9
CiPaw.03G271300 Carya illinoinensis HOM05D006027 ORTHO05D007604 8.5e-38 161.0 152 60.5
CBR_g12742 Chara braunii HOM05D006027 ORTHO05D007604 1.2e-36 157.1 110 63.6
Ah.15g092630 Amaranthus hybridus HOM05D006027 ORTHO05D007604 3.0e-35 152.5 126 63.5
MCO16G336 Micromonas commoda HOM05D006027 ORTHO05D007604 2.6e-34 149.4 110 59.1
Cre10.g440450 Chlamydomonas reinhardtii HOM05D006027 ORTHO05D007604 5.7e-34 148.3 109 60.6
PRCOL_00005949 Prasinoderma coloniale HOM05D006027 ORTHO05D007604 9.7e-34 147.5 106 60.4
CSS0017427 Camellia sinensis var. sinensis HOM05D006027 ORTHO05D007604 3.2e-29 132.5 143 54.5
Zm00001eb141750 Zea mays HOM05D006027 ORTHO05D007604 3.8e-22 109.0 59 83.1
Zm00001eb141790 Zea mays HOM05D006027 ORTHO05D007604 3.8e-22 109.0 59 83.1
TAR362G0025 Trochodendron aralioides HOM05D006027 ORTHO05D007604 4.7e-20 102.1 79 65.8
RcHm_v2.0_Chr6g0286561 Rosa chinensis HOM05D006027 ORTHO05D007604 3.1e-16 89.4 79 62.0
Zm00001eb141760 Zea mays HOM05D006027 ORTHO05D007604 5.4e-16 88.6 64 67.2
CDE09G0356 Ceratophyllum demersum HOM05D006027 ORTHO05D007604 3.8e-14 82.4 86 51.2


User provided reference genes

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