Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C70G4 Lonicera japonica HOM05D000576 ORTHO05D000368 6.0e-109 397.5 201 100.0
Lj7A204T10 Lonicera japonica HOM05D000576 ORTHO05D000368 6.0e-40 168.3 95 85.3
Lj7A195T11 Lonicera japonica HOM05D000576 ORTHO05D000368 8.9e-36 154.5 137 60.6
Lj1A70T15 Lonicera japonica HOM05D000576 ORTHO05D000368 1.3e-34 150.6 136 59.6
Lj1C69T17 Lonicera japonica HOM05D000576 ORTHO05D000368 8.1e-21 104.8 120 50.8
Migut.I00397 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.1e-12 76.3 125 38.4
Migut.J00679 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.0e-12 74.7 117 35.9
QL03p059577 Quercus lobata HOM05D000576 ORTHO05D000368 9.0e-12 74.7 147 32.7
Migut.O00220 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.5e-11 73.9 133 33.8
Migut.C00140 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.0e-11 73.6 128 32.0
RcHm_v2.0_Chr3g0449571 Rosa chinensis HOM05D000576 ORTHO05D000368 2.6e-11 73.2 118 33.9
Prupe.I001500 Prunus persica HOM05D000576 ORTHO05D000368 3.4e-11 72.8 134 32.1
Hma1.2p1_0024F.1_g015920 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 4.5e-11 72.4 130 34.6
Prupe.6G354500 Prunus persica HOM05D000576 ORTHO05D000368 4.5e-11 72.4 135 31.1
FvH4_6g01850 Fragaria vesca HOM05D000576 ORTHO05D000368 5.8e-11 72.0 121 35.5
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 7.6e-11 71.6 126 33.3
MD05G1360100 Malus domestica HOM05D000576 ORTHO05D000368 7.6e-11 71.6 148 29.1
FAN26G1635 Fragaria x ananassa HOM05D000576 ORTHO05D000368 9.9e-11 71.2 141 32.6
QL03p004102 Quercus lobata HOM05D000576 ORTHO05D000368 9.9e-11 71.2 120 36.7
Lj6P729T22 Lonicera japonica HOM05D000576 ORTHO05D000368 1.3e-10 70.9 136 33.1
FAN19G2202 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.7e-10 70.5 142 31.7
Hma1.2p1_1677F.1_g297050 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.7e-10 70.5 136 30.9
Cfa013470 Carpinus fangiana HOM05D000576 ORTHO05D000368 2.9e-10 69.7 122 28.7
FAN28G1394 Fragaria x ananassa HOM05D000576 ORTHO05D000368 2.9e-10 69.7 144 31.2
Hma1.2p1_1488F.1_g286620 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 3.8e-10 69.3 136 30.9
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 6.4e-10 68.6 126 32.5
RcHm_v2.0_Chr3g0449591 Rosa chinensis HOM05D000576 ORTHO05D000368 6.4e-10 68.6 128 30.5
vmacro02138 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 6.4e-10 68.6 127 30.7
vmacro23074 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 6.4e-10 68.6 127 30.7
Migut.J00168 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.4e-10 68.2 134 32.8
Lj8A85G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.4e-09 67.4 125 29.6
RcHm_v2.0_Chr3g0449531 Rosa chinensis HOM05D000576 ORTHO05D000368 1.4e-09 67.4 134 29.9
Migut.E00768 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-09 67.0 124 31.5
Migut.O00916 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-09 67.0 124 31.5
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 1.9e-09 67.0 125 34.4
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 1.9e-09 67.0 123 31.7
Migut.H01270 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.4e-09 66.6 171 28.7
FvH4_1g15870 Fragaria vesca HOM05D000555 ORTHO05D000646 2.4e-09 66.6 132 30.3
RcHm_v2.0_Chr2g0105211 Rosa chinensis HOM05D000576 ORTHO05D000368 2.4e-09 66.6 112 35.7
Migut.J00886 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.2e-09 66.2 103 33.0
QL10p004694 Quercus lobata HOM05D000576 ORTHO05D000368 4.2e-09 65.9 132 30.3
QL10p005093 Quercus lobata HOM05D000576 ORTHO05D000368 4.2e-09 65.9 132 28.8
RhsimUnG0214200 Rhododendron simsii HOM05D000576 ORTHO05D000368 4.2e-09 65.9 121 29.8
TAR371G0526 Trochodendron aralioides HOM05D000576 ORTHO05D000368 4.2e-09 65.9 147 29.9
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 5.4e-09 65.5 126 31.7
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 5.4e-09 65.5 126 27.8
Prupe.7G247200 Prunus persica HOM05D000576 ORTHO05D000368 5.4e-09 65.5 142 27.5
SGA_v2.0_scaffold70G23622 Striga asiatica HOM05D000576 ORTHO05D000368 7.1e-09 65.1 129 31.8
Migut.O00904 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.3e-09 64.7 122 32.0
FAN19G3107 Fragaria x ananassa HOM05D000555 ORTHO05D000646 9.3e-09 64.7 132 30.3
Lj1A555T36 Lonicera japonica HOM05D000576 ORTHO05D000368 9.3e-09 64.7 129 30.2
RcHm_v2.0_Chr3g0449551 Rosa chinensis HOM05D000576 ORTHO05D000368 9.3e-09 64.7 130 30.8
FAN01G1594 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-08 64.3 125 29.6
FAN19G1792 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.2e-08 64.3 166 24.7
Migut.D02158 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-08 63.9 162 27.8
Migut.J00219 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-08 63.9 127 29.1
MD14G1064800 Malus domestica HOM05D000576 ORTHO05D000368 1.6e-08 63.9 143 27.3
Peaxi162Scf00045g01340 Petunia axillaris HOM05D000576 ORTHO05D000368 1.6e-08 63.9 127 34.6
QL04p071108 Quercus lobata HOM05D000576 ORTHO05D000368 1.6e-08 63.9 137 30.7
QL10p005853 Quercus lobata HOM05D000576 ORTHO05D000368 1.6e-08 63.9 145 31.0
RcHm_v2.0_Chr7g0197551 Rosa chinensis HOM05D000576 ORTHO05D000368 1.6e-08 63.9 146 24.0
Migut.J00967 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-08 63.5 119 29.4
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 2.1e-08 63.5 126 31.7
Prupe.7G069300 Prunus persica HOM05D000576 ORTHO05D000368 2.1e-08 63.5 152 28.9
QL10p004673 Quercus lobata HOM05D000576 ORTHO05D000368 2.1e-08 63.5 132 29.5
Gohir.A08G113400 Gossypium hirsutum HOM05D000576 ORTHO05D000368 2.7e-08 63.2 129 28.7
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 2.7e-08 63.2 129 28.7
Gorai.004G137200 Gossypium raimondii HOM05D000576 ORTHO05D000368 2.7e-08 63.2 129 28.7
Lj2A751T36 Lonicera japonica HOM05D000576 ORTHO05D000368 2.7e-08 63.2 130 31.5
QL10p040037 Quercus lobata HOM05D000576 ORTHO05D000368 2.7e-08 63.2 128 32.0
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.7e-08 63.2 147 28.6
Ciclev10015410m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.5e-08 62.8 156 28.2
FAN05G5357 Fragaria x ananassa HOM05D000576 ORTHO05D000368 3.5e-08 62.8 131 31.3
Prupe.6G354300 Prunus persica HOM05D000576 ORTHO05D000368 3.5e-08 62.8 161 27.3
vmacro19410 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 3.5e-08 62.8 123 33.3
FAN01G1348 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.6e-08 62.4 139 28.8
FAN23G1369 Fragaria x ananassa HOM05D000576 ORTHO05D000368 4.6e-08 62.4 54 46.3
Prupe.8G168400 Prunus persica HOM05D000576 ORTHO05D000368 4.6e-08 62.4 139 25.2
Actinidia23749 Actinidia chinensis HOM05D000576 ORTHO05D000368 6.0e-08 62.0 115 32.2
AUR62042200 Chenopodium quinoa HOM05D000576 ORTHO05D000368 6.0e-08 62.0 121 29.8
Cc02_g36480 Coffea canephora HOM05D000576 ORTHO05D000368 6.0e-08 62.0 145 32.4
Migut.E00770 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.0e-08 62.0 126 29.4
Hma1.2p1_0670F.1_g200460 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.0e-08 62.0 133 29.3
Hma1.2p1_1488F.1_g286610 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 6.0e-08 62.0 59 44.1
Lj6A233T24 Lonicera japonica HOM05D000576 ORTHO05D000368 6.0e-08 62.0 116 31.0
Peaxi162Scf00945g00015 Petunia axillaris HOM05D000576 ORTHO05D000368 6.0e-08 62.0 128 31.2
Peaxi162Scf00945g00016 Petunia axillaris HOM05D000576 ORTHO05D000368 6.0e-08 62.0 122 33.6
TWI63G0443 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 6.0e-08 62.0 132 28.0
vmacro05897 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 6.0e-08 62.0 131 28.2
Migut.J00569 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.9e-08 61.6 131 29.0
Hma1.2p1_0079F.1_g041370 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 7.9e-08 61.6 59 45.8
Lj2A749T20 Lonicera japonica HOM05D000576 ORTHO05D000368 1.0e-07 61.2 132 30.3
QL10p004689 Quercus lobata HOM05D000576 ORTHO05D000368 1.0e-07 61.2 133 28.6
QL10p005864 Quercus lobata HOM05D000576 ORTHO05D000368 1.0e-07 61.2 159 28.3
Thecc.02G282900 Theobroma cacao HOM05D000576 ORTHO05D000368 1.0e-07 61.2 134 31.3
TAR636G0024 Trochodendron aralioides HOM05D000576 ORTHO05D000368 1.0e-07 61.2 58 41.4
AUR62001484 Chenopodium quinoa HOM05D000576 ORTHO05D000368 1.3e-07 60.8 128 29.7
MD12G1064700 Malus domestica HOM05D000576 ORTHO05D000368 1.3e-07 60.8 152 27.0
RcHm_v2.0_Chr3g0471621 Rosa chinensis HOM05D000576 ORTHO05D000368 1.3e-07 60.8 143 28.0
COL.COLO4_05517 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.8e-07 60.5 125 31.2
Dinv11096 Davidia involucrata HOM05D000576 ORTHO05D000368 1.8e-07 60.5 157 28.7
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 1.8e-07 60.5 157 28.7
Migut.J00148 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.8e-07 60.5 127 28.3
RcHm_v2.0_Chr2g0105201 Rosa chinensis HOM05D000576 ORTHO05D000368 1.8e-07 60.5 134 29.1
TWI31G0199 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.8e-07 60.5 147 29.3
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.8e-07 60.5 136 26.5
EL10Ac5g10961 Beta vulgaris HOM05D000576 ORTHO05D000368 2.3e-07 60.1 124 32.3
CSS0015792 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 2.3e-07 60.1 131 26.7
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 2.3e-07 60.1 149 26.8
Migut.J00218 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.3e-07 60.1 141 27.7
Lj1A1062T25 Lonicera japonica HOM05D000576 ORTHO05D000368 2.3e-07 60.1 132 28.8
Prupe.5G213700 Prunus persica HOM05D000576 ORTHO05D000368 2.3e-07 60.1 119 30.3
Prupe.7G069200 Prunus persica HOM05D000576 ORTHO05D000368 2.3e-07 60.1 144 25.7
Prupe.8G038200 Prunus persica HOM05D000576 ORTHO05D000368 2.3e-07 60.1 135 27.4
QL03p058059 Quercus lobata HOM05D000576 ORTHO05D000368 2.3e-07 60.1 126 27.0
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.3e-07 60.1 127 29.9
Hund06307 Selenicereus undatus HOM05D000576 ORTHO05D000368 2.3e-07 60.1 84 33.3
Migut.G00965 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-07 59.7 155 27.1
Migut.J00790 Erythranthe guttata HOM05D000576 ORTHO05D000368 3.0e-07 59.7 117 28.2
Peaxi162Scf00066g01414 Petunia axillaris HOM05D000576 ORTHO05D000368 3.0e-07 59.7 127 33.1
TWI63G1205 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.0e-07 59.7 157 22.3
Hma1.2p1_0108F.1_g052030 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 3.9e-07 59.3 148 29.7
RcHm_v2.0_Chr2g0105261 Rosa chinensis HOM05D000576 ORTHO05D000368 3.9e-07 59.3 57 45.6
TWI73G0365 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.9e-07 59.3 135 23.7
COL.COLO4_29715 Corchorus olitorius HOM05D000576 ORTHO05D000368 5.1e-07 58.9 128 31.2
FvH4_1g04271 Fragaria vesca HOM05D000576 ORTHO05D000368 5.1e-07 58.9 59 35.6
FAN19G2457 Fragaria x ananassa HOM05D000576 ORTHO05D000368 5.1e-07 58.9 59 35.6
Lj7A319T20 Lonicera japonica HOM05D000576 ORTHO05D000368 5.1e-07 58.9 70 40.0
Prupe.5G083600 Prunus persica HOM05D000576 ORTHO05D000368 5.1e-07 58.9 59 40.7
PGR004G0847 Punica granatum HOM05D000576 ORTHO05D000368 5.1e-07 58.9 112 33.0
Rhsim02G0021500 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.1e-07 58.9 58 44.8
TWI63G0051 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.1e-07 58.9 139 23.0
Migut.J00163 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.7e-07 58.5 173 26.6
Migut.J00215 Erythranthe guttata HOM05D000576 ORTHO05D000368 6.7e-07 58.5 135 28.1
RcHm_v2.0_Chr1g0360451 Rosa chinensis HOM05D000576 ORTHO05D000368 6.7e-07 58.5 123 30.1
Migut.J00888 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.7e-07 58.2 119 30.3
Migut.J00889 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.7e-07 58.2 110 29.1
FvH4_7g08150 Fragaria vesca HOM05D000576 ORTHO05D000368 8.7e-07 58.2 150 26.7
FAN06G0443 Fragaria x ananassa HOM05D000576 ORTHO05D000368 8.7e-07 58.2 150 26.7
Lj5A97T93 Lonicera japonica HOM05D000576 ORTHO05D000368 8.7e-07 58.2 63 39.7
Lj7A334T37 Lonicera japonica HOM05D000576 ORTHO05D000368 8.7e-07 58.2 70 40.0
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 8.7e-07 58.2 132 29.5
RcHm_v2.0_Chr1g0330451 Rosa chinensis HOM05D000576 ORTHO05D000368 8.7e-07 58.2 125 30.4
CANSAT01G1935 Cannabis sativa HOM05D000576 ORTHO05D000368 1.1e-06 57.8 165 26.7
COL.COLO4_09429 Corchorus olitorius HOM05D000189 ORTHO05D007610 1.1e-06 57.8 127 30.7
COL.COLO4_29714 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.1e-06 57.8 138 31.2
Migut.G00408 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-06 57.8 112 33.0
Eucgr.K02764 Eucalyptus grandis HOM05D000576 ORTHO05D000368 1.1e-06 57.8 132 28.0
FAN26G1711 Fragaria x ananassa HOM05D000576 ORTHO05D000368 1.1e-06 57.8 132 29.5
MELO3C026220.2 Cucumis melo HOM05D000576 ORTHO05D000368 1.5e-06 57.4 162 26.5
Migut.G01093 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.5e-06 57.4 155 28.4
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.5e-06 57.4 121 27.3
AUR62003536 Chenopodium quinoa HOM05D002507 ORTHO05D003045 1.9e-06 57.0 56 41.1
Migut.I00042 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-06 57.0 130 28.5
Migut.J00161 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-06 57.0 59 39.0
Migut.J00216 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-06 57.0 62 38.7
Lj9A565T43 Lonicera japonica HOM05D000576 ORTHO05D000368 1.9e-06 57.0 149 27.5
Migut.J00217 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.5e-06 56.6 55 43.6
FvH4_1g04270 Fragaria vesca HOM05D000576 ORTHO05D000368 2.5e-06 56.6 59 35.6
Ciclev10020079m.g Citrus clementina HOM05D000576 ORTHO05D000368 3.3e-06 56.2 130 25.4
COL.COLO4_13818 Corchorus olitorius HOM05D000576 ORTHO05D000368 3.3e-06 56.2 112 33.0
MD02G1028400 Malus domestica HOM05D000005 ORTHO05D000368 3.3e-06 56.2 141 25.5
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 3.3e-06 56.2 138 25.4
Ciclev10008324m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.3e-06 55.8 135 25.9
ECA232G1201 Erigeron canadensis HOM05D000576 ORTHO05D000368 4.3e-06 55.8 57 38.6
Migut.J00184 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.3e-06 55.8 130 26.2
FvH4_1g15890 Fragaria vesca HOM05D000576 ORTHO05D000368 4.3e-06 55.8 136 27.9
TWI63G0411 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 4.3e-06 55.8 128 23.4
EL10Ac1g02073 Beta vulgaris HOM05D000576 ORTHO05D000368 5.6e-06 55.5 136 25.7
Migut.E01276 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.6e-06 55.5 145 26.9
Gohir.D02G143600 Gossypium hirsutum HOM05D000576 ORTHO05D000368 5.6e-06 55.5 135 32.6
Gorai.005G161100 Gossypium raimondii HOM05D000576 ORTHO05D000368 5.6e-06 55.5 135 32.6
Lj4C677G6 Lonicera japonica HOM05D000576 ORTHO05D000368 5.6e-06 55.5 131 32.1
GSVIVG01014322001 Vitis vinifera HOM05D000576 ORTHO05D000368 5.6e-06 55.5 147 28.6
Gohir.A03G120400 Gossypium hirsutum HOM05D000576 ORTHO05D000368 7.4e-06 55.1 133 30.8
EL10Ac9g20900 Beta vulgaris HOM05D000576 ORTHO05D000368 9.6e-06 54.7 98 32.7
Migut.J00887 Erythranthe guttata HOM05D000576 ORTHO05D000368 9.6e-06 54.7 95 28.4
SGA_v2.0_scaffold342G49404 Striga asiatica HOM05D000576 ORTHO05D000368 9.6e-06 54.7 124 27.4
Thecc.03G058200 Theobroma cacao HOM05D000576 ORTHO05D000368 9.6e-06 54.7 125 27.2


User provided reference genes

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