Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C533T3 Lonicera japonica HOM05D012073 ORTHO05D010375 3.1e-193 678.7 462 100.0
Lj1A541T30 Lonicera japonica HOM05D012073 ORTHO05D010375 7.6e-131 471.5 480 71.7
Lj1A533T14 Lonicera japonica HOM05D012073 ORTHO05D010375 2.0e-59 234.2 317 50.2
Lj1A538T17 Lonicera japonica HOM05D012073 ORTHO05D010375 7.2e-57 225.7 324 52.5
Lj1A530T31 Lonicera japonica HOM05D012073 ORTHO05D010375 1.6e-56 224.6 332 51.5
Lj1A532T8 Lonicera japonica HOM05D012073 ORTHO05D010375 8.9e-47 192.2 280 48.9
Lj1A540T15 Lonicera japonica HOM05D012073 ORTHO05D010375 2.3e-42 177.6 265 46.8
Lj1A540G14 Lonicera japonica HOM05D012073 ORTHO05D010375 1.4e-36 158.3 261 44.8
Lj1P540T8 Lonicera japonica HOM05D012073 ORTHO05D010375 1.7e-34 151.4 261 44.4
Lju1601A0G40 Lonicera japonica HOM05D012073 ORTHO05D010375 1.2e-32 145.2 321 37.4
Lj1A653T21 Lonicera japonica HOM05D012073 ORTHO05D010375 1.2e-30 138.7 315 36.5
Lj1A533T15 Lonicera japonica HOM05D012073 ORTHO05D010375 6.0e-27 126.3 224 42.9
Lj1A530T30 Lonicera japonica HOM05D012073 ORTHO05D010375 1.5e-14 85.1 134 47.0
Dinv38771 Davidia involucrata HOM05D000455 ORTHO05D000434 1.4e-07 62.0 121 33.9
Cc11_g02140 Coffea canephora HOM05D000455 ORTHO05D000434 3.1e-07 60.8 125 28.8
Dinv38769 Davidia involucrata HOM05D000455 ORTHO05D000434 9.0e-07 59.3 121 33.1
CSS0048685 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 1.2e-06 58.9 128 28.9
Cc07_g19820 Coffea canephora HOM05D000455 ORTHO05D000434 1.2e-06 58.9 131 30.5
Actinidia22184 Actinidia chinensis HOM05D000455 ORTHO05D000434 3.4e-06 57.4 127 32.3
Dinv34975 Davidia involucrata HOM05D000455 ORTHO05D000434 3.4e-06 57.4 105 30.5
Dinv24844 Davidia involucrata HOM05D000455 ORTHO05D000434 4.5e-06 57.0 125 29.6
CSS0006544 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.8e-06 56.6 81 32.1
CSS0008760 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.8e-06 56.6 125 34.4
CSS0010178 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.8e-06 56.6 127 26.8
CSS0027820 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 5.8e-06 56.6 125 34.4
CSS0038214 Camellia sinensis var. sinensis HOM05D000455 ORTHO05D000434 9.9e-06 55.8 123 34.1
Cc06_g21810 Coffea canephora HOM05D000455 ORTHO05D000434 9.9e-06 55.8 131 29.8
DCAR_030911 Daucus carota HOM05D000010 ORTHO05D010375 9.9e-06 55.8 134 27.6
Lj3A59T15 Lonicera japonica HOM05D000455 ORTHO05D010375 9.9e-06 55.8 114 31.6
vmacro18354 Vaccinium macrocarpon HOM05D000455 ORTHO05D000434 9.9e-06 55.8 68 41.2


User provided reference genes

Program Settings