Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C4G2 Lonicera japonica HOM05D006057 ORTHO05D007224 5.3e-114 414.5 222 100.0
Lju2566A1T37 Lonicera japonica HOM05D006057 ORTHO05D007224 3.5e-65 252.3 157 90.4
Hma1.2p1_0350F.1_g132530 Hydrangea macrophylla HOM05D006057 ORTHO05D007224 4.3e-39 165.6 130 76.9
CSS0031729 Camellia sinensis var. sinensis HOM05D006057 ORTHO05D007224 4.7e-38 162.2 129 75.2
vmacro02351 Vaccinium macrocarpon HOM05D006057 ORTHO05D007224 7.5e-36 154.8 123 70.7
ECA238G2998 Erigeron canadensis HOM05D006057 ORTHO05D007224 1.1e-34 151.0 128 66.4
GSVIVG01028268001 Vitis vinifera HOM05D006057 ORTHO05D007224 1.9e-34 150.2 105 77.1
Rhsim01G0001300 Rhododendron simsii HOM05D006057 ORTHO05D007224 4.1e-34 149.1 129 69.0
Manes.05G006500 Manihot esculenta HOM05D006057 ORTHO05D007224 7.1e-34 148.3 126 63.5
DCAR_012291 Daucus carota HOM05D006057 ORTHO05D007224 9.2e-34 147.9 129 66.7
DCAR_012292 Daucus carota HOM05D006057 ORTHO05D007224 7.8e-33 144.8 129 64.3
QL09p037524 Quercus lobata HOM05D006057 ORTHO05D007224 1.3e-32 144.1 129 68.2
HanXRQChr07g0194641 Helianthus annuus HOM05D006057 ORTHO05D007224 3.9e-32 142.5 127 60.6
Oeu048368.1 Olea europaea HOM05D006057 ORTHO05D007224 3.9e-32 142.5 118 65.3
Lsat_1_v5_gn_2_108401 Lactuca sativa HOM05D006057 ORTHO05D007224 6.6e-32 141.7 121 66.1
Nitab4.5_0002046g0150 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.6e-32 141.7 128 63.3
Nitab4.5_0002450g0080 Nicotiana tabacum HOM05D006057 ORTHO05D007224 6.6e-32 141.7 128 63.3
Peaxi162Scf00314g00430 Petunia axillaris HOM05D006057 ORTHO05D007224 8.6e-32 141.4 128 64.1
Solyc03g118440.3 Solanum lycopersicum HOM05D006057 ORTHO05D007224 1.1e-31 141.0 124 65.3
Sopen03g037330 Solanum pennellii HOM05D006057 ORTHO05D007224 1.1e-31 141.0 124 65.3
COL.COLO4_23092 Corchorus olitorius HOM05D006057 ORTHO05D007224 1.5e-31 140.6 130 66.2
Migut.L00831 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.5e-31 140.6 113 67.3
Migut.L01023 Erythranthe guttata HOM05D006057 ORTHO05D007224 1.9e-31 140.2 127 59.1
TAR633G2394 Trochodendron aralioides HOM05D006057 ORTHO05D007224 1.9e-31 140.2 130 66.2
PGSC0003DMG400014183 Solanum tuberosum HOM05D006057 ORTHO05D007224 2.5e-31 139.8 124 64.5
Atru.chr5.830 Acer truncatum HOM05D006057 ORTHO05D007224 4.3e-31 139.0 131 63.4
Duzib138G1502 Durio zibethinus HOM05D006057 ORTHO05D007224 4.3e-31 139.0 130 60.8
Gohir.D12G122500 Gossypium hirsutum HOM05D006057 ORTHO05D007224 4.3e-31 139.0 127 63.8
Gorai.008G133300 Gossypium raimondii HOM05D006057 ORTHO05D007224 4.3e-31 139.0 127 63.8
CAN.G843.33 Capsicum annuum HOM05D006057 ORTHO05D007224 7.3e-31 138.3 128 60.9
Migut.L00999 Erythranthe guttata HOM05D006057 ORTHO05D007224 7.3e-31 138.3 107 67.3
Eucgr.A00985 Eucalyptus grandis HOM05D006057 ORTHO05D007224 2.1e-30 136.7 120 62.5
arahy.Tifrunner.gnm1.ann1.78VVNS Arachis hypogaea HOM05D006057 ORTHO05D007224 3.6e-30 136.0 118 66.1
arahy.Tifrunner.gnm1.ann1.TF3SPP Arachis hypogaea HOM05D006057 ORTHO05D007224 3.6e-30 136.0 118 66.1
Sp6g39640 Schrenkiella parvula HOM05D006057 ORTHO05D007224 4.7e-30 135.6 120 61.7
Lj5g0024678 Lotus japonicus HOM05D006057 ORTHO05D007224 6.2e-30 135.2 122 63.9
Potri.014G110300 Populus trichocarpa HOM05D006057 ORTHO05D007224 8.1e-30 134.8 127 62.2
Glyma.10G140400 Glycine max HOM05D006057 ORTHO05D007224 2.3e-29 133.3 121 63.6
BcaB05g21854 Brassica carinata HOM05D006057 ORTHO05D007224 4.0e-29 132.5 120 60.8
AL6G12340 Arabidopsis lyrata HOM05D006057 ORTHO05D007224 5.2e-29 132.1 121 59.5
BcaC03g13034 Brassica carinata HOM05D006057 ORTHO05D007224 1.2e-28 131.0 120 60.0
BcaC03g13036 Brassica carinata HOM05D006057 ORTHO05D007224 1.2e-28 131.0 120 60.0
BraA02t04741Z Brassica rapa HOM05D006057 ORTHO05D007224 1.2e-28 131.0 119 60.5
Ciclev10023548m.g Citrus clementina HOM05D006057 ORTHO05D007224 1.2e-28 131.0 113 64.6
MBI18_g03875_MAGBIO Magnolia biondii HOM05D006057 ORTHO05D007224 1.2e-28 131.0 120 62.5
CANSAT25G1403 Cannabis sativa HOM05D006057 ORTHO05D007224 1.5e-28 130.6 126 60.3
Thhalv10015298m.g Eutrema salsugineum HOM05D006057 ORTHO05D007224 1.5e-28 130.6 118 59.3
PGR042G0310 Punica granatum HOM05D006057 ORTHO05D007224 1.5e-28 130.6 127 59.1
TWI14G0531 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 1.5e-28 130.6 122 64.8
C02p00760 Brassica napus HOM05D006057 ORTHO05D007224 2.0e-28 130.2 130 57.7
BolC2t06074H Brassica oleracea HOM05D006057 ORTHO05D007224 2.0e-28 130.2 130 57.7
Aa31LG1G21980 Aethionema arabicum HOM05D006057 ORTHO05D007224 2.6e-28 129.8 120 59.2
AT5G03050 Arabidopsis thaliana HOM05D006057 ORTHO05D007224 2.6e-28 129.8 121 58.7
Lalb_Chr02g0147311 Lupinus albus HOM05D006057 ORTHO05D007224 2.6e-28 129.8 123 60.2
Medtr1g085440 Medicago truncatula HOM05D006057 ORTHO05D007224 2.6e-28 129.8 121 60.3
Phvul.007G207500 Phaseolus vulgaris HOM05D006057 ORTHO05D007224 2.6e-28 129.8 122 62.3
CARHR210270 Cardamine hirsuta HOM05D006057 ORTHO05D007224 4.4e-28 129.0 121 60.3
Haze_05170 Corylus avellana HOM05D006057 ORTHO05D007224 4.4e-28 129.0 112 65.2
Medtr4g118050 Medicago truncatula HOM05D006057 ORTHO05D007224 4.4e-28 129.0 121 61.2
VMungo0720G1137 Vigna mungo HOM05D006057 ORTHO05D007224 4.4e-28 129.0 96 68.8
BcaC06g32028 Brassica carinata HOM05D006057 ORTHO05D007224 5.8e-28 128.6 120 60.0
Carub.0006s0184 Capsella rubella HOM05D006057 ORTHO05D007224 5.8e-28 128.6 121 58.7
Gohir.A12G118700 Gossypium hirsutum HOM05D006057 ORTHO05D007224 5.8e-28 128.6 127 59.1
Actinidia21332 Actinidia chinensis HOM05D006057 ORTHO05D007224 7.6e-28 128.3 81 82.7
TPR.G3097 Trifolium pratense HOM05D006057 ORTHO05D007224 7.6e-28 128.3 118 61.9
CDE01G0754 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 9.9e-28 127.9 120 59.2
Medtr1g085355 Medicago truncatula HOM05D006057 ORTHO05D007224 9.9e-28 127.9 122 60.7
Nn4g25242 Nelumbo nucifera HOM05D006057 ORTHO05D007224 9.9e-28 127.9 125 62.4
Sed0018142 Sechium edule HOM05D006057 ORTHO05D007224 9.9e-28 127.9 125 58.4
BcaC06g32027 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-27 127.5 119 61.3
BcaNung04734 Brassica carinata HOM05D006057 ORTHO05D007224 1.3e-27 127.5 119 61.3
BolC9t60103H Brassica oleracea HOM05D006057 ORTHO05D007224 1.3e-27 127.5 119 61.3
BcaNung05509 Brassica carinata HOM05D006057 ORTHO05D007224 4.9e-27 125.6 85 72.9
C09p73700 Brassica napus HOM05D006057 ORTHO05D007224 6.4e-27 125.2 119 60.5
BolC9t60100H Brassica oleracea HOM05D006057 ORTHO05D007224 6.4e-27 125.2 119 60.5
Cpa.g.sc57.50 Carica papaya HOM05D006057 ORTHO05D007224 6.4e-27 125.2 126 62.7
TWI59G0504 Tripterygium wilfordii HOM05D006057 ORTHO05D007224 8.4e-27 124.8 129 61.2
Psat6g157560 Pisum sativum HOM05D006057 ORTHO05D007224 1.1e-26 124.4 118 59.3
BraA10t45317Z Brassica rapa HOM05D006057 ORTHO05D007224 1.4e-26 124.0 120 60.0
Cc08_g05070 Coffea canephora HOM05D006057 ORTHO05D007224 1.4e-26 124.0 105 66.7
SGA_v2.0_scaffold38G15005 Striga asiatica HOM05D006057 ORTHO05D007224 1.4e-26 124.0 121 59.5
PSO339G1810 Papaver somniferum HOM05D006057 ORTHO05D007224 1.9e-26 123.6 128 59.4
Ca_10224_v3 Cicer arietinum L. HOM05D006057 ORTHO05D007224 2.4e-26 123.2 120 62.5
ClCG10G013240 Citrullus lanatus HOM05D006057 ORTHO05D007224 3.2e-26 122.9 128 59.4
Nitab4.5_0001841g0090 Nicotiana tabacum HOM05D006057 ORTHO05D007224 4.1e-26 122.5 134 58.2
SGA_v2.0_scaffold36G14563 Striga asiatica HOM05D006057 ORTHO05D007224 4.1e-26 122.5 118 61.0
Gohir.A07G132650 Gossypium hirsutum HOM05D006057 ORTHO05D007224 7.1e-26 121.7 97 66.0
PSO081G0045 Papaver somniferum HOM05D006057 ORTHO05D007224 7.1e-26 121.7 128 59.4
SHI19776 Sapria himalayana HOM05D006057 ORTHO05D007224 7.1e-26 121.7 111 56.8
Prupe.3G028700 Prunus persica HOM05D006057 ORTHO05D007224 3.5e-25 119.4 128 56.2
PSO170G4276 Papaver somniferum HOM05D006057 ORTHO05D007224 6.0e-25 118.6 129 57.4
CsaV3_3G043390 Cucumis sativus L. HOM05D006057 ORTHO05D007224 1.0e-24 117.9 128 57.0
unitig_26.g10007 Utricularia gibba HOM05D006057 ORTHO05D007224 1.0e-24 117.9 119 55.5
Nitab4.5_0010904g0040 Nicotiana tabacum HOM05D006057 ORTHO05D007224 1.3e-24 117.5 134 56.0
Sabra02G0131200 Salix brachista HOM05D006057 ORTHO05D007224 1.3e-24 117.5 132 55.3
MELO3C026900.2 Cucumis melo HOM05D006057 ORTHO05D007224 3.9e-24 115.9 128 56.2
FvH4_6g36280 Fragaria vesca HOM05D006057 ORTHO05D007224 3.9e-24 115.9 126 55.6
MD17G1156700 Malus domestica HOM05D006057 ORTHO05D007224 3.9e-24 115.9 122 56.6
AUR62000136 Chenopodium quinoa HOM05D006057 ORTHO05D007224 8.6e-24 114.8 99 60.6
RcHm_v2.0_Chr2g0148291 Rosa chinensis HOM05D006057 ORTHO05D007224 8.6e-24 114.8 129 51.9
Aqoxy5G02874 Aquilegia oxysepala HOM05D006057 ORTHO05D007224 1.1e-23 114.4 129 56.6
Sc09g0000780 Simmondsia chinensis HOM05D006057 ORTHO05D007224 1.1e-23 114.4 99 62.6
Ah.06g194050 Amaranthus hybridus HOM05D006057 ORTHO05D007224 1.5e-23 114.0 120 55.8
Ah.04g162100 Amaranthus hybridus HOM05D006057 ORTHO05D007224 4.3e-23 112.5 124 55.6
Hund22023 Selenicereus undatus HOM05D006057 ORTHO05D007224 1.2e-22 110.9 125 56.0
Glyma.20G089200 Glycine max HOM05D006057 ORTHO05D007224 1.6e-22 110.5 133 53.4
EL10Ac4g10232 Beta vulgaris HOM05D006057 ORTHO05D007224 6.2e-22 108.6 125 52.8
HPP92_026861 Vanilla planifolia HOM05D006057 ORTHO05D007224 5.2e-21 105.5 132 53.0
AUR62019316 Chenopodium quinoa HOM05D006057 ORTHO05D007224 7.6e-20 101.7 127 48.8
Dinv05504 Davidia involucrata HOM05D006057 ORTHO05D007224 9.9e-20 101.3 89 73.0
CDE12G0816 Ceratophyllum demersum HOM05D006057 ORTHO05D007224 2.2e-19 100.1 68 75.0
Potri.002G184600 Populus trichocarpa HOM05D006057 ORTHO05D007224 3.2e-18 96.3 109 54.1
ATR0019G040 Amborella trichopoda HOM05D006057 ORTHO05D007224 5.4e-18 95.5 94 56.4
SEGI_31615 Sequoiadendron giganteum HOM05D006057 ORTHO05D007224 9.3e-18 94.7 97 50.5
Gorai.001G149000 Gossypium raimondii HOM05D006057 ORTHO05D007224 1.3e-16 90.9 67 70.1
BcaNung05508 Brassica carinata HOM05D006057 ORTHO05D007224 1.7e-16 90.5 99 50.5
Zm00001eb000680 Zea mays HOM05D006057 ORTHO05D007224 3.0e-16 89.7 97 51.5
Os03g0108700 Oryza sativa ssp. japonica HOM05D006057 ORTHO05D007224 6.6e-16 88.6 86 53.5
Gohir.D07G136950 Gossypium hirsutum HOM05D006057 ORTHO05D007224 1.9e-15 87.0 67 70.1
CiPaw.07G127700 Carya illinoinensis HOM05D006057 ORTHO05D007224 6.2e-14 82.0 112 48.2
SMO361G0765 Selaginella moellendorffii HOM05D006057 ORTHO05D007224 1.8e-13 80.5 85 49.4
TPR.G3076 Trifolium pratense HOM05D006057 ORTHO05D007224 1.9e-10 70.5 82 52.4
Pp3c25_8550 Physcomitrium patens HOM05D006057 ORTHO05D007224 3.2e-10 69.7 88 40.9
CBR_g39249 Chara braunii HOM05D006057 ORTHO05D007224 9.3e-10 68.2 101 39.6
Mapoly0076s0084 Marchantia polymorpha HOM05D006057 ORTHO05D007224 4.3e-07 59.3 122 32.8
Ah.15g097910 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.1e-06 57.0 40 65.0
Ah.15g098350 Amaranthus hybridus HOM05D012832 ORTHO05D019522 2.1e-06 57.0 40 65.0


User provided reference genes

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