Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C391G4 Lonicera japonica HOM05D000041 ORTHO05D234348 4.8e-56 221.1 125 100.0
Lj1C396T4 Lonicera japonica HOM05D000041 ORTHO05D234941 8.0e-43 177.2 116 78.4
Lj1P384T6 Lonicera japonica HOM05D000041 ORTHO05D235541 3.0e-26 122.1 112 58.9
Lj1A166T22 Lonicera japonica HOM05D000041 ORTHO05D000061 2.4e-23 112.5 113 65.5
Lj1A396T8 Lonicera japonica HOM05D000041 ORTHO05D235613 9.2e-23 110.5 112 61.6
Lj1C161T20 Lonicera japonica HOM05D000041 ORTHO05D013799 1.1e-18 97.1 71 69.0
Lj1C162T2 Lonicera japonica HOM05D000041 ORTHO05D000061 1.2e-17 93.6 71 67.6
Lj1P391T4 Lonicera japonica HOM05D000041 ORTHO05D234858 5.4e-15 84.7 89 60.7
Lj1P174T12 Lonicera japonica HOM05D000041 ORTHO05D000061 3.3e-12 75.5 67 59.7
Lj1C173T0 Lonicera japonica HOM05D000041 ORTHO05D013799 1.2e-11 73.6 66 60.6
Nitab4.5_0004207g0020 Nicotiana tabacum HOM05D000041 ORTHO05D000061 5.2e-10 68.2 136 32.4
Nitab4.5_0007030g0050 Nicotiana tabacum HOM05D000041 ORTHO05D000061 8.9e-10 67.4 136 30.9
CiPaw.14G074300 Carya illinoinensis HOM05D000041 ORTHO05D000061 1.2e-09 67.0 71 54.9
Sopen11g030570 Solanum pennellii HOM05D000041 ORTHO05D000061 1.5e-09 66.6 95 36.8
DCAR_015585 Daucus carota HOM05D000041 ORTHO05D000061 2.6e-09 65.9 103 40.8
Nitab4.5_0001887g0050 Nicotiana tabacum HOM05D000041 ORTHO05D000061 4.4e-09 65.1 134 30.6
Lj2C1046G7 Lonicera japonica HOM05D000041 ORTHO05D000061 5.8e-09 64.7 96 46.9
Lj2C1047T7 Lonicera japonica HOM05D000041 ORTHO05D000061 5.8e-09 64.7 96 46.9
Sabra09G0017700 Salix brachista HOM05D000041 ORTHO05D000061 5.8e-09 64.7 140 35.0
Solyc11g072910.1 Solanum lycopersicum HOM05D000041 ORTHO05D000061 5.8e-09 64.7 95 35.8
PGSC0003DMG400015547 Solanum tuberosum HOM05D000041 ORTHO05D000061 5.8e-09 64.7 95 35.8
Nitab4.5_0000026g0430 Nicotiana tabacum HOM05D000041 ORTHO05D000061 7.5e-09 64.3 134 30.6
Potri.009G026600 Populus trichocarpa HOM05D000041 ORTHO05D000061 7.5e-09 64.3 138 34.1
CAN.G2195.1 Capsicum annuum HOM05D000041 ORTHO05D000061 1.3e-08 63.5 94 37.2
CAN.G241.22 Capsicum annuum HOM05D000041 ORTHO05D000061 1.3e-08 63.5 94 37.2
CiPaw.13G102000 Carya illinoinensis HOM05D000041 ORTHO05D000061 1.3e-08 63.5 71 52.1
Dinv26290 Davidia involucrata HOM05D000041 ORTHO05D000061 1.7e-08 63.2 98 48.0
Oeu012679.1 Olea europaea HOM05D000041 ORTHO05D000061 1.7e-08 63.2 107 37.4
CSS0016096 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D000061 3.7e-08 62.0 129 41.9
PGSC0003DMG400009689 Solanum tuberosum HOM05D000041 ORTHO05D000061 4.9e-08 61.6 94 38.3
MSTRG.12626 Avicennia marina HOM05D000041 ORTHO05D000061 1.1e-07 60.5 94 37.2
MSTRG.21168 Avicennia marina HOM05D000041 ORTHO05D000061 1.1e-07 60.5 99 39.4
Lj1C177T3 Lonicera japonica HOM05D000041 ORTHO05D000061 1.4e-07 60.1 94 37.2
Sopen06g001210 Solanum pennellii HOM05D000041 ORTHO05D000061 1.9e-07 59.7 94 36.2
Hma1.2p1_0746F.1_g212320 Hydrangea macrophylla HOM05D000041 ORTHO05D000061 2.4e-07 59.3 109 36.7
Manes.04G029000 Manihot esculenta HOM05D000041 ORTHO05D000061 2.4e-07 59.3 67 55.2
Oeu062301.1 Olea europaea HOM05D000041 ORTHO05D000061 4.1e-07 58.5 99 39.4
Cfa011425 Carpinus fangiana HOM05D000041 ORTHO05D000061 5.4e-07 58.2 70 50.0
COL.COLO4_18421 Corchorus olitorius HOM05D000041 ORTHO05D000061 5.4e-07 58.2 71 53.5
Cc01_g12080 Coffea canephora HOM05D000041 ORTHO05D000061 7.1e-07 57.8 99 34.3
Haze_24003 Corylus avellana HOM05D000041 ORTHO05D000061 7.1e-07 57.8 70 47.1
Migut.N02648 Erythranthe guttata HOM05D000041 ORTHO05D000061 7.1e-07 57.8 94 37.2
Carub.0008s2034 Capsella rubella HOM05D000041 ORTHO05D000061 9.2e-07 57.4 132 34.1
Peaxi162Scf00411g00081 Petunia axillaris HOM05D000041 ORTHO05D000061 1.2e-06 57.0 69 42.0
Potri.001G234200 Populus trichocarpa HOM05D000041 ORTHO05D000061 1.2e-06 57.0 72 48.6
TAR633G0930 Trochodendron aralioides HOM05D000041 ORTHO05D000061 1.2e-06 57.0 135 41.5
Duzib168G2321 Durio zibethinus HOM05D000041 ORTHO05D000061 1.6e-06 56.6 71 47.9
Lj3g0015304 Lotus japonicus HOM05D000041 ORTHO05D000061 1.6e-06 56.6 72 45.8
MD11G1117300 Malus domestica HOM05D000041 ORTHO05D000061 1.6e-06 56.6 71 52.1
Gohir.A03G037500 Gossypium hirsutum HOM05D000041 ORTHO05D000061 2.1e-06 56.2 70 50.0
Gorai.003G137700 Gossypium raimondii HOM05D000041 ORTHO05D000061 2.1e-06 56.2 70 50.0
Prupe.6G087900 Prunus persica HOM05D000041 ORTHO05D000061 2.1e-06 56.2 102 38.2
Glyma.15G042900 Glycine max HOM05D000041 ORTHO05D000061 2.7e-06 55.8 72 52.8
Sabra16G0140500 Salix brachista HOM05D000041 ORTHO05D000061 2.7e-06 55.8 72 48.6
MD03G1103600 Malus domestica HOM05D000041 ORTHO05D000061 3.5e-06 55.5 71 49.3
TWI31G0026 Tripterygium wilfordii HOM05D000041 ORTHO05D000061 3.5e-06 55.5 71 50.7
Dinv32864 Davidia involucrata HOM05D000041 ORTHO05D000061 6.0e-06 54.7 100 49.0
Gohir.D03G130900 Gossypium hirsutum HOM05D000041 ORTHO05D000061 6.0e-06 54.7 70 48.6
Lalb_Chr14g0374931 Lupinus albus HOM05D000041 ORTHO05D000061 6.0e-06 54.7 72 44.4
Manes.11G136800 Manihot esculenta HOM05D000041 ORTHO05D000061 6.0e-06 54.7 66 54.5
Rhsim13G0088800 Rhododendron simsii HOM05D000041 ORTHO05D000061 6.0e-06 54.7 90 40.0
FAN25G0257 Fragaria x ananassa HOM05D000041 ORTHO05D000061 7.8e-06 54.3 71 45.1
TAR320G0001 Trochodendron aralioides HOM05D000041 ORTHO05D000061 7.8e-06 54.3 66 48.5
TAR369G1145 Trochodendron aralioides HOM05D000041 ORTHO05D000061 7.8e-06 54.3 66 48.5


User provided reference genes

Program Settings