Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C36G1 Lonicera japonica HOM05D000568 ORTHO05D000628 7.6e-80 300.4 151 100.0
FAN24G0913 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.6e-19 99.4 126 52.4
Haze_04844 Corylus avellana HOM05D000568 ORTHO05D000628 2.8e-18 95.9 141 48.2
Gohir.A11G116700 Gossypium hirsutum HOM05D000568 ORTHO05D000628 1.3e-15 87.0 132 44.7
Lj2A1187G54 Lonicera japonica HOM05D000568 ORTHO05D000628 1.5e-14 83.6 115 47.8
Ca_00555_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 1.3e-10 70.5 91 48.4
Psat1g190000 Pisum sativum HOM05D000568 ORTHO05D000628 1.3e-10 70.5 91 48.4
GSVIVG01010980001 Vitis vinifera HOM05D000568 ORTHO05D000628 4.8e-10 68.6 178 33.7
FAN07G1518 Fragaria x ananassa HOM05D000568 ORTHO05D000628 1.1e-09 67.4 94 46.8
Lalb_Chr07g0177611 Lupinus albus HOM05D000568 ORTHO05D000628 1.4e-09 67.0 93 45.2
Sabra08G0155300 Salix brachista HOM05D000568 ORTHO05D000628 1.4e-09 67.0 100 45.0
Dinv33013 Davidia involucrata HOM05D000568 ORTHO05D000628 1.8e-09 66.6 178 32.0
Medtr2g019740 Medicago truncatula HOM05D000568 ORTHO05D000628 2.4e-09 66.2 91 47.3
FAN17G0266 Fragaria x ananassa HOM05D000568 ORTHO05D000628 7.0e-09 64.7 93 46.2
Lj6A671T65 Lonicera japonica HOM05D000568 ORTHO05D000628 7.0e-09 64.7 109 43.1
Hma1.2p1_0399F.1_g144030 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 9.1e-09 64.3 167 32.9
Prupe.8G254900 Prunus persica HOM05D000568 ORTHO05D000628 9.1e-09 64.3 180 33.3
TPR.G40101 Trifolium pratense HOM05D001236 ORTHO05D001090 9.1e-09 64.3 92 42.4
CSS0038128 Camellia sinensis var. sinensis HOM05D000568 ORTHO05D000628 2.0e-08 63.2 175 32.6
MD11G1301200 Malus domestica HOM05D000568 ORTHO05D000628 2.7e-08 62.8 178 32.6
Lj5g0005422 Lotus japonicus HOM05D000568 ORTHO05D000628 3.5e-08 62.4 176 33.0
RcHm_v2.0_Chr6g0292971 Rosa chinensis HOM05D000568 ORTHO05D000628 3.5e-08 62.4 170 34.1
TPR.G35517 Trifolium pratense HOM05D000568 ORTHO05D000628 3.5e-08 62.4 91 46.2
FAN20G2496 Fragaria x ananassa HOM05D000568 ORTHO05D000628 5.9e-08 61.6 169 33.7
TWI14G0800 Tripterygium wilfordii HOM05D000568 ORTHO05D000628 5.9e-08 61.6 198 30.3
vmacro08112 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 7.7e-08 61.2 77 48.1
Duzib133G0182 Durio zibethinus HOM05D000568 ORTHO05D000628 1.0e-07 60.8 180 31.7
Glyma.02G153700 Glycine max HOM05D000568 ORTHO05D000628 1.0e-07 60.8 176 31.2
Phvul.006G163300 Phaseolus vulgaris HOM05D000568 ORTHO05D000628 1.0e-07 60.8 97 44.3
CBR_g5575 Chara braunii HOM05D000568 ORTHO05D005559 1.3e-07 60.5 83 39.8
Thecc.01G293100 Theobroma cacao HOM05D000568 ORTHO05D000628 1.3e-07 60.5 179 31.8
COL.COLO4_08006 Corchorus olitorius HOM05D000568 ORTHO05D000628 1.7e-07 60.1 181 31.5
Glyma.13G217000 Glycine max HOM05D000568 ORTHO05D000628 1.7e-07 60.1 61 52.5
Hma1.2p1_0698F.1_g205389 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 1.7e-07 60.1 126 34.1
Hma1.2p1_2251F.1_g318090 Hydrangea macrophylla HOM05D000568 ORTHO05D000628 1.7e-07 60.1 126 34.1
FAN15G1036 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.2e-07 59.7 169 33.7
FAN27G1623 Fragaria x ananassa HOM05D000568 ORTHO05D000628 2.2e-07 59.7 169 33.7
Rhsim04G0218900 Rhododendron simsii HOM05D000568 ORTHO05D000628 2.2e-07 59.7 94 45.7
QL12p024472 Quercus lobata HOM05D000568 ORTHO05D000628 2.9e-07 59.3 171 33.3
VMungo0540G0868 Vigna mungo HOM05D000568 ORTHO05D000628 5.0e-07 58.5 97 43.3
Actinidia00685 Actinidia chinensis HOM05D000568 ORTHO05D000628 6.5e-07 58.2 156 30.8
FvH4_2g24990 Fragaria vesca HOM05D000568 ORTHO05D000628 6.5e-07 58.2 169 33.1
Ca_10358_v3 Cicer arietinum L. HOM05D000568 ORTHO05D000628 8.5e-07 57.8 169 34.3
Oeu044778.1 Olea europaea HOM05D000568 ORTHO05D000628 8.5e-07 57.8 115 39.1
Rhsim13G0015800 Rhododendron simsii HOM05D000568 ORTHO05D000628 8.5e-07 57.8 183 30.6
vmacro02495 Vaccinium macrocarpon HOM05D000568 ORTHO05D000628 8.5e-07 57.8 184 29.9
Actinidia40246 Actinidia chinensis HOM05D000568 ORTHO05D000628 1.5e-06 57.0 102 42.2
CiPaw.07G102500 Carya illinoinensis HOM05D000568 ORTHO05D000628 1.5e-06 57.0 176 33.0
Cfa005997 Carpinus fangiana HOM05D000568 ORTHO05D000628 1.9e-06 56.6 177 33.3
Ciclev10019968m.g Citrus clementina HOM05D000568 ORTHO05D000628 1.9e-06 56.6 175 32.0
Duzib138G0737 Durio zibethinus HOM05D000568 ORTHO05D000628 4.2e-06 55.5 179 30.2
Gohir.D11G121800 Gossypium hirsutum HOM05D000568 ORTHO05D000628 5.5e-06 55.1 179 30.7
Gorai.007G130500 Gossypium raimondii HOM05D000568 ORTHO05D000628 7.2e-06 54.7 179 30.7
CAN.G256.19 Capsicum annuum HOM05D000568 ORTHO05D018879 9.4e-06 54.3 54 55.6
Eucgr.H01196 Eucalyptus grandis HOM05D000568 ORTHO05D000628 9.4e-06 54.3 169 29.6


User provided reference genes

Program Settings