Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj1C364T9 Lonicera japonica HOM05D002816 ORTHO05D005633 7.5e-68 260.4 131 100.0
Lju1319A3T40 Lonicera japonica HOM05D002816 ORTHO05D005633 1.0e-64 250.0 125 100.0
Dinv36301 Davidia involucrata HOM05D002816 ORTHO05D005633 3.5e-57 224.9 129 87.6
Duzib168G1434 Durio zibethinus HOM05D002816 ORTHO05D005633 5.1e-56 221.1 129 82.9
Lsat_1_v5_gn_2_101081 Lactuca sativa HOM05D002816 ORTHO05D005633 5.1e-56 221.1 129 85.3
GSVIVG01025332001 Vitis vinifera HOM05D002816 ORTHO05D005633 6.6e-56 220.7 129 84.5
FAN25G1910 Fragaria x ananassa HOM05D002816 ORTHO05D005633 8.6e-56 220.3 129 83.7
Cfa009698 Carpinus fangiana HOM05D002816 ORTHO05D005633 2.5e-55 218.8 129 82.2
Haze_23048 Corylus avellana HOM05D002816 ORTHO05D005633 5.6e-55 217.6 129 81.4
Oeu014059.1 Olea europaea HOM05D002816 ORTHO05D005633 5.6e-55 217.6 129 84.5
Potri.003G210600 Populus trichocarpa HOM05D002816 ORTHO05D005633 5.6e-55 217.6 128 82.8
COL.COLO4_09898 Corchorus olitorius HOM05D002816 ORTHO05D005633 7.3e-55 217.2 129 81.4
HanXRQChr07g0196931 Helianthus annuus HOM05D002816 ORTHO05D005633 1.6e-54 216.1 129 81.4
Ciclev10017962m.g Citrus clementina HOM05D002816 ORTHO05D005633 2.1e-54 215.7 130 80.8
ECA238G3506 Erigeron canadensis HOM05D002816 ORTHO05D005633 2.1e-54 215.7 129 79.8
Thecc.09G223700 Theobroma cacao HOM05D002816 ORTHO05D005633 2.1e-54 215.7 129 82.2
FvH4_3g43570 Fragaria vesca HOM05D002816 ORTHO05D005633 2.8e-54 215.3 129 82.2
FAN11G3609 Fragaria x ananassa HOM05D002816 ORTHO05D005633 2.8e-54 215.3 129 82.2
Potri.003G210701 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.8e-54 215.3 128 81.2
Potri.T085701 Populus trichocarpa HOM05D002816 ORTHO05D005633 2.8e-54 215.3 128 81.2
Gorai.009G071300 Gossypium raimondii HOM05D002816 ORTHO05D005633 3.6e-54 214.9 129 79.8
Hma1.2p1_2304F.1_g319340 Hydrangea macrophylla HOM05D002816 ORTHO05D005633 3.6e-54 214.9 129 81.4
CANSAT54G2844 Cannabis sativa HOM05D002816 ORTHO05D005633 4.7e-54 214.5 129 80.6
CiPaw.13G165300 Carya illinoinensis HOM05D002816 ORTHO05D005633 4.7e-54 214.5 129 80.6
FAN21G1421 Fragaria x ananassa HOM05D002816 ORTHO05D005633 4.7e-54 214.5 129 81.4
FAN16G1696 Fragaria x ananassa HOM05D002816 ORTHO05D005633 6.2e-54 214.2 129 81.4
Prupe.6G018300 Prunus persica HOM05D002816 ORTHO05D005633 8.1e-54 213.8 129 82.2
Manes.14G014200 Manihot esculenta HOM05D002816 ORTHO05D005633 1.8e-53 212.6 127 81.9
Gohir.D05G070300 Gossypium hirsutum HOM05D002816 ORTHO05D005633 2.3e-53 212.2 127 79.5
Atru.chr3.2513 Acer truncatum HOM05D002816 ORTHO05D005633 6.8e-53 210.7 129 79.8
DCAR_023760 Daucus carota HOM05D002816 ORTHO05D005633 6.8e-53 210.7 129 80.6
Gohir.A05G067400 Gossypium hirsutum HOM05D002816 ORTHO05D005633 6.8e-53 210.7 127 78.7
MD11G1022500 Malus domestica HOM05D002816 ORTHO05D005633 8.9e-53 210.3 129 80.6
RcHm_v2.0_Chr5g0078141 Rosa chinensis HOM05D002816 ORTHO05D005633 1.5e-52 209.5 129 79.1
Aqoxy1G00177 Aquilegia oxysepala HOM05D002816 ORTHO05D005633 2.6e-52 208.8 129 80.6
MD03G1020900 Malus domestica HOM05D002816 ORTHO05D005633 3.4e-52 208.4 129 79.8
TAR163G0001 Trochodendron aralioides HOM05D002816 ORTHO05D005633 7.6e-52 207.2 127 79.5
QL01p006152 Quercus lobata HOM05D002816 ORTHO05D005633 9.9e-52 206.8 128 79.7
CSS0023415 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.3e-51 206.5 129 80.6
CSS0044925 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 1.3e-51 206.5 129 80.6
Migut.D00561 Erythranthe guttata HOM05D002816 ORTHO05D005633 2.9e-51 205.3 129 79.1
Duzib150G1626 Durio zibethinus HOM05D002816 ORTHO05D005633 1.1e-50 203.4 128 78.1
MBI04_g14276_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 1.4e-50 203.0 129 78.3
Actinidia39381 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.9e-50 202.6 129 79.8
Nitab4.5_0003796g0070 Nicotiana tabacum HOM05D002816 ORTHO05D005633 3.2e-50 201.8 129 77.5
TWI75G1088 Tripterygium wilfordii HOM05D002816 ORTHO05D005633 3.2e-50 201.8 130 80.0
Peaxi162Scf00559g00421 Petunia axillaris HOM05D002816 ORTHO05D005633 4.1e-50 201.4 129 76.7
MBI04_g27135_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 5.4e-50 201.1 128 78.1
Psat5g289080 Pisum sativum HOM05D002816 ORTHO05D005633 3.5e-49 198.4 130 74.6
Eucgr.J00812 Eucalyptus grandis HOM05D002816 ORTHO05D005633 4.6e-49 198.0 129 76.7
Cpa.g.sc84.106 Carica papaya HOM05D002816 ORTHO05D005633 7.8e-49 197.2 129 75.2
Actinidia16293 Actinidia chinensis HOM05D002816 ORTHO05D005633 1.0e-48 196.8 126 78.6
Solyc01g006640.1 Solanum lycopersicum HOM05D002816 ORTHO05D005633 3.0e-48 195.3 131 74.0
PGSC0003DMG400021382 Solanum tuberosum HOM05D002816 ORTHO05D005633 3.0e-48 195.3 131 74.0
Eucgr.J00816 Eucalyptus grandis HOM05D002816 ORTHO05D005633 3.9e-48 194.9 127 75.6
Glyma.12G054833 Glycine max HOM05D002816 ORTHO05D005633 3.9e-48 194.9 129 71.3
CSS0011782 Camellia sinensis var. sinensis HOM05D002816 ORTHO05D005633 6.6e-48 194.1 127 78.0
Eucgr.J00810 Eucalyptus grandis HOM05D002816 ORTHO05D005633 6.6e-48 194.1 129 75.2
CAN.G388.65 Capsicum annuum HOM05D002816 ORTHO05D005633 8.6e-48 193.7 129 72.9
Lj3g0024115 Lotus japonicus HOM05D002816 ORTHO05D005633 1.9e-47 192.6 129 71.3
Sopen01g002630 Solanum pennellii HOM05D002816 ORTHO05D005633 3.3e-47 191.8 131 73.3
vmacro22895 Vaccinium macrocarpon HOM05D002816 ORTHO05D005633 5.6e-47 191.0 126 77.0
Cc01_g04160 Coffea canephora HOM05D002816 ORTHO05D005633 2.8e-46 188.7 127 74.0
Lalb_Chr03g0026201 Lupinus albus HOM05D002816 ORTHO05D005633 2.8e-46 188.7 127 70.9
ECA233G2205 Erigeron canadensis HOM05D002816 ORTHO05D005633 4.7e-46 188.0 127 76.4
CAN.G388.66 Capsicum annuum HOM05D002816 ORTHO05D005633 1.1e-45 186.8 126 72.2
ClCG02G023650 Citrullus lanatus HOM05D002816 ORTHO05D005633 1.4e-45 186.4 128 72.7
Glyma.15G031700 Glycine max HOM05D002816 ORTHO05D005633 2.4e-45 185.7 131 73.3
Glyma.13G342600 Glycine max HOM05D002816 ORTHO05D005633 3.1e-45 185.3 131 73.3
Lsat_1_v5_gn_6_50280 Lactuca sativa HOM05D002816 ORTHO05D005633 3.1e-45 185.3 128 72.7
Lj3g0016219 Lotus japonicus HOM05D002816 ORTHO05D005633 4.0e-45 184.9 129 70.5
arahy.Tifrunner.gnm1.ann1.4LCW9K Arachis hypogaea HOM05D002816 ORTHO05D005633 5.2e-45 184.5 132 69.7
arahy.Tifrunner.gnm1.ann1.YK6NC6 Arachis hypogaea HOM05D002816 ORTHO05D005633 5.2e-45 184.5 132 69.7
ECA233G1587 Erigeron canadensis HOM05D002816 ORTHO05D005633 8.9e-45 183.7 126 74.6
VMungo1080G0972 Vigna mungo HOM05D002816 ORTHO05D005633 8.9e-45 183.7 130 70.8
Sed0025537 Sechium edule HOM05D002816 ORTHO05D005633 1.2e-44 183.3 128 69.5
MELO3C014642.2 Cucumis melo HOM05D002816 ORTHO05D005633 2.0e-44 182.6 128 70.3
Sopen01g002590 Solanum pennellii HOM05D002816 ORTHO05D005633 2.6e-44 182.2 126 70.6
CsaV3_4G023760 Cucumis sativus L. HOM05D002816 ORTHO05D005633 5.8e-44 181.0 128 69.5
MBI04_g27132_MAGBIO Magnolia biondii HOM05D002816 ORTHO05D005633 5.8e-44 181.0 115 79.1
Nitab4.5_0009808g0040 Nicotiana tabacum HOM05D002816 ORTHO05D005633 5.8e-44 181.0 111 79.3
arahy.Tifrunner.gnm1.ann1.D5VX0F Arachis hypogaea HOM05D002816 ORTHO05D005633 7.6e-44 180.6 130 68.5
VMungo1127G0859 Vigna mungo HOM05D002816 ORTHO05D005633 7.6e-44 180.6 128 64.8
arahy.Tifrunner.gnm1.ann1.S74NHW Arachis hypogaea HOM05D002816 ORTHO05D005633 9.9e-44 180.3 130 68.5
HanXRQChr02g0056791 Helianthus annuus HOM05D002816 ORTHO05D005633 1.3e-43 179.9 126 73.8
Solyc01g006600.3 Solanum lycopersicum HOM05D002816 ORTHO05D005633 2.2e-43 179.1 126 69.8
Psat7g213680 Pisum sativum HOM05D002816 ORTHO05D005633 8.4e-43 177.2 131 67.2
Migut.N02292 Erythranthe guttata HOM05D002816 ORTHO05D005633 1.1e-42 176.8 127 73.2
TPR.G13661 Trifolium pratense HOM05D004419 ORTHO05D005633 1.9e-42 176.0 129 67.4
SalBow5G4185 Salvia bowleyana HOM05D002816 ORTHO05D005633 3.2e-42 175.3 129 67.4
Medtr2g098490 Medicago truncatula HOM05D002816 ORTHO05D005633 4.2e-42 174.9 129 67.4
Ca_20583_v3 Cicer arietinum L. HOM05D002816 ORTHO05D005633 7.1e-42 174.1 130 65.4
PGR119G2184 Punica granatum HOM05D002816 ORTHO05D005633 7.1e-42 174.1 110 77.3
ATR0605G130 Amborella trichopoda HOM05D002816 ORTHO05D005633 9.3e-42 173.7 129 64.3
Zm00001eb079870 Zea mays HOM05D002816 ORTHO05D005633 9.3e-42 173.7 129 63.6
TPR.G18843 Trifolium pratense HOM05D002816 ORTHO05D005633 2.1e-41 172.6 129 65.1
Cc01_g04080 Coffea canephora HOM05D002816 ORTHO05D005633 4.6e-41 171.4 126 69.8
PGR119G0739 Punica granatum HOM05D002816 ORTHO05D005633 4.6e-41 171.4 106 75.5
Medtr4g066130 Medicago truncatula HOM05D002816 ORTHO05D005633 3.0e-40 168.7 128 64.8
DCAR_029714 Daucus carota HOM05D002816 ORTHO05D005633 1.1e-39 166.8 127 66.9
Os04g0473900 Oryza sativa ssp. japonica HOM05D002816 ORTHO05D005633 4.8e-38 161.4 127 60.6
SEGI_08242 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.3e-31 138.3 126 54.8
SEGI_08878 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.8e-30 134.8 126 52.4
SEGI_27256 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 4.8e-30 134.8 126 52.4
SEGI_13421 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.7e-27 126.3 128 50.8
SMO115G0335 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 6.9e-21 104.4 127 43.3
SMO166G0063 Selaginella moellendorffii HOM05D002816 ORTHO05D005633 2.0e-20 102.8 127 42.5
AagrBONN_evm.TU.Sc2ySwM_344.2597 Anthoceros agrestis HOM05D002816 ORTHO05D005633 7.6e-20 100.9 125 43.2
SEGI_37312 Sequoiadendron giganteum HOM05D002816 ORTHO05D005633 1.0e-19 100.5 88 52.3
Psat7g121000 Pisum sativum HOM05D002816 ORTHO05D005633 2.9e-19 99.0 67 68.7
Mapoly0023s0010 Marchantia polymorpha HOM05D002816 ORTHO05D005633 6.5e-19 97.8 128 37.5
Psat6g019120 Pisum sativum HOM05D002816 ORTHO05D005633 1.3e-06 57.0 59 45.8


User provided reference genes

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